Odocoileus virginianus (white-tailed deer): 110126412
Help
Entry
110126412 CDS
T10722
Symbol
TRIM56
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM56
KO
K12026
tripartite motif-containing protein 56 [EC:
2.3.2.27
]
Organism
ovr Odocoileus virginianus (white-tailed deer)
Brite
Enzymes [BR:
ovr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110126412 (TRIM56)
Ubiquitin system [BR:
ovr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
110126412 (TRIM56)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
110126412
NCBI-ProteinID:
XP_020731708
UniProt:
A0A6J0W222
LinkDB
All DBs
Position
33:complement(34232169..34237899)
Genome browser
AA seq
755 aa
AA seq
DB search
MVSQGSSPSLLEALSSDFLACKICLEQLRVPKTLPCLHTYCQDCLAQLAEGGHLRCPECR
ESVPVPPAGVAAFKTNFFVNGLLDLVKARAGGDLRAGKPACALCPLMGGASAGGPATARC
LDCADDLCQACADGHRCTRQTHSHRVVDLVGYRAGWYDEEARERQAAQCPQHPGEALRFL
CQPCSQLLCRECRLDPHLDHPCLPLAEAVRARRPGLEELLAGVDSNLAELEATRLAEKEA
LARLREQAAKVVMQVEEAAEGVLRALLAQKQEVLGQLRAHVEAAEEAARERLGELEGREQ
VAREAAAFARRVLSLGREAEILSLEGAIAQRLRQLQGCPWVPGPAPCQLPQLELHPGLLD
KNCHLLRLSFEEQQLLKDSRKDGARSPGGDAAQPQSRDGVQTPNQDRAQTPQEDEAQPLK
AERAETPQEDGAKTPKEGRAQTPQEDGGTQAARGGRSNKKRKFKGRLKSVSREPSPAPGP
NLEGSGLLPRPIFFCSFPTRMPGDKRAPRITGLCPFGSREILVADEQNRALKRFSLNGDY
RGVVPVPEGCSPCSVAALQDAVAFSAAARLYLINHNGEVQWRRALSLCQASHAVAAMPSG
DRVAVSVSGHVEVYNMEGSLATRFIPGGKANRGLRALVFLTTSPQGHFVGSDWQQNSLVV
CDGLGQVVGEYRGPGLHGCQPGSVSVDKKGYIFLTLREVNKVVILDPKGALLGDFLTAYH
GLEKPRVTTMVDGRYLVVSLSNGTIHVFRVRPLDS
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atggtttcccagggctcctcaccctccctcctggaggccctgagcagcgacttcctggcc
tgtaaaatctgcctggaacaactgcgggtgcccaaaacgctgccctgcctgcacacctac
tgccaggactgcctggcacagctagccgagggcggccacctccgatgccccgagtgccgt
gagtctgtgcccgtgccgcccgcgggcgtggccgccttcaagaccaacttctttgtcaac
ggactcctggatttggtgaaggcccgggccggcggcgacctgcgggcagggaagccggcc
tgtgccctatgccccctgatggggggcgccagcgccggggggccagccactgcccgctgc
ctggactgtgccgatgacctgtgccaggcctgtgccgacgggcaccggtgcacccggcag
acccacagccaccgagtggtggacctggtgggctacagggcggggtggtacgatgaggag
gcccgggagcgccaggcggcccagtgcccccagcaccccggggaggccctgcgcttcctg
tgccagccgtgctcccagctgctgtgccgagagtgtcgcctggaccctcacctggaccac
ccctgcctgcccctggctgaggctgtgcgcgcccggaggccaggcctcgaggagctgctg
gccggcgtggacagcaacctggccgagctggaggccacccggctggccgaaaaggaagcc
ttggcccggctgcgggagcaggcggccaaggtagtcatgcaggtggaggaggcggccgag
ggggtcctcagggccctcctggcccagaagcaggaggtgcttgggcagctgcgggcccac
gtagaggctgccgaggaggctgctcgggagcggctgggggagctggagggccgggagcag
gtggccagggaggcggctgcctttgcccgtcgggtgctcagcctggggcgcgaggctgag
atcctctctctggagggggcgatcgcccagcggctccggcagctgcagggctgtccctgg
gtgcctgggcccgctccctgccagctgccccagctggaactgcatcccgggctcctggac
aagaactgccacctgctgaggctctcctttgaggagcagcagctgctgaaggacagcagg
aaggatggagcccgaagcccgggaggtgacgcagcccagccccagagcagggatggagtg
cagaccccaaatcaggacagagcgcagacaccccaagaagatgaagcccagcccctcaag
gcggagagagctgagacgccccaggaagatggagccaagacccccaaagagggcagagcc
cagacaccccaagaagatggaggaacccaggccgcaaggggcggcagatccaacaagaag
aggaagttcaaaggcagactcaagtccgtctcccgggagcccagccccgcccccgggcca
aacctggagggctccggcctcctgcccaggcccatctttttctgcagcttccccacgcgg
atgccgggggacaagcgcgccccccggatcactgggctctgtccctttggctcccgggag
atcctggtggccgatgagcagaaccgggccctgaagcgcttctctctcaatggcgactac
aggggcgtggtgcccgtgcccgagggctgctccccatgtagcgtggctgccctgcaggac
gccgtggccttctcagcggccgcgcggctctatctcatcaaccacaacggagaggtgcag
tggcgccgggcgctgagcctctgccaggccagccacgccgtggctgccatgccgagcggg
gaccgggtggcggtcagcgtgtccggccacgtggaggtgtacaacatggaaggcagcctg
gccacgcggttcatccccgggggcaaggccaaccggggcctgcgggcactggtgttcctg
accaccagcccccagggccattttgtagggtctgattggcagcagaatagcttggtggtc
tgtgatgggctgggtcaggtggttggggagtaccgaggacccggcctgcacggctgccag
ccgggctccgtatccgtggataagaaaggctacatctttctgacccttcgcgaggtcaac
aaggtagtgatcctcgatccaaagggcgcactgcttggcgacttcctgacggcctatcat
ggcctggaaaagccccgggtgaccaccatggtggacggcaggtacctggtcgtgtccctc
agtaacgggaccatccatgtatttcgggtccgccctcttgacagttaa
DBGET
integrated database retrieval system
