Odocoileus virginianus (white-tailed deer): 110126748
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Entry
110126748 CDS
T10722
Symbol
PCDH11X
Name
(RefSeq) protocadherin-11 X-linked isoform X1
KO
K16498
protocadherin delta 1
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
110126748 (PCDH11X)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ovr01009
]
110126748 (PCDH11X)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ovr04515
]
110126748 (PCDH11X)
Protein phosphatases and associated proteins [BR:
ovr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
110126748 (PCDH11X)
Cell adhesion molecules [BR:
ovr04515
]
Cadherins
Protocadherins
110126748 (PCDH11X)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
DUF6377
Motif
Other DBs
NCBI-GeneID:
110126748
NCBI-ProteinID:
XP_070318078
LinkDB
All DBs
Position
X:41624193..42582931
Genome browser
AA seq
1346 aa
AA seq
DB search
MDLLSGTYIFAVLLACVVFQSGAQEKNYTIREEMPENVLIGDLLKDLNLSLIPDKSLTTP
MQFKLVYKTGDVPLIRIEEGTGEIFTTGARIDREKLCAGIIVDTRCFYEVEVAVLPDEIF
RLVKIRFLIEDINDNAPLFPATVINISIPENSAINSRYALPAAIDPDTGINGVQNYQLIK
GQNIFGLDIIETPEGEKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVA
DTNDNHPVFKEDEIEVNIPENAPVGSSVTQLHATDADIGENARIHFYFSNLVSSMAKRLF
HLNSTTGLITVKEPLDREESPNHKLLVLASDGGLMPARAMVLVNVTDVNDNVPLIDIRYI
INPINGTVVLSENAPLNTKIALITVTDKDADHNGRVTCFTDHEVPFRLRPVFSNQFLLET
AAYLDYESTREYAIKLLAADAGKPPLNQSSMLLIKLKDENDNAPVFTQSFISLSVPENNS
PGTQLTKISATDADTGRNAEIHYLLGIDAPSEFNLDHRTGILTAVKKLDREKQEKYSFTV
LAKDNGMPSLITNATVLVTVLDQNDNSPIFTHNEYNFYVPENLPRHGTVGLITVTDPDYG
ENSAVTLSILDANDDFTIDPQTGVIRPNISFDREKQESYTFYVKAEDGGRVSHSSTAKVT
INVVDVNDNKPVFVVPPSNYSFELVPPSANPGTVVFTVVAIDNDTGMNAELRYSIVGGNT
KGLFMIDQTTGNITLKEKCVLADLGLHKLIVKAKDLGQPDSLFSVINVNLFVNESMTNAT
LIYELVRKNIETPVTQNIETTDTSSPSSDYVKIMVAIVAGTITVILVIFITAVVRCRQTP
HLKAAQKNKQNSEWVTPNPENRQMMMMKKKKKRKKHTPKNLLLNFVTIEEAKAEDADNDR
NTVTLDLPIELEEQTMGKYNWGTTPTTFKPDSPDLARHYKSASPQPAFQIQPETPLNSKH
HIIQELPLDNTFVGCDSISKCSSSSSDPYSVSECSYPVTTFKTPVSVHTRLPMKEVVRSH
TPMKETTTVEIWTHPHPQRKSEGKKTVKSQRRVTFHLPECSQESNSDGGLGDHDAGSLPS
TSHALPLGYPQEEYFDHAVNNNRTEGDGNSDPESTFIPGLKKAAEIAIQPTLEEASDNCT
QECLILGHSDACWMPASLTHSSPSQAQASTLCHSPPLTQTTLRRRNPLVTQAVALCHSPP
MSQAIALCHSPPPAQTSALHHSPPLAQALRHSPPPAQASALYYSPPLAQAATIHCSPPLP
QPAALHRSPAQPPMGLQQGWGQGAGPEGLLSLDRGAQGSTSSQFYAMSERLHPSDDSIKV
IPLTTFTTGQQARPSRDDSPIMEEHP
NT seq
4041 nt
NT seq
+upstream
nt +downstream
nt
atggacttgttgtccgggacgtatatatttgcggttctgttagcatgtgtcgtgtttcag
tctggcgcccaggagaagaactacaccattcgggaagaaatgccagaaaacgtcctcata
ggcgatttgctgaaagacctcaacttgtcgctaattccagacaagtctttaacaactcct
atgcaattcaagttagtatacaagaccggagatgtgccactgattcgaattgaagagggc
acaggtgagatcttcactactggagctcgcattgatcgtgagaaattgtgtgctggcatc
atagtggacacccgttgcttttatgaagtggaggttgccgttctgccggatgaaatattt
agattggttaaaatacgttttctgatagaagacataaatgataatgcaccattatttcct
gcaacggttatcaatatatcaattccagagaactcggctataaactctcgatatgctctc
ccagcggccattgatccagacacaggaataaatggagttcaaaactaccaactaattaag
ggtcaaaatatttttggacttgatatcatagaaacgccagaaggagagaagatgccacaa
ttaatagttcaaaaggagttagatagggaagaaaaagatacatatgtaatgaaagtaaag
gttgaagatggtggctttcctcaaagatccagtactgctattttgcaagtcagtgttgct
gatacaaatgacaaccatccagtttttaaggaggatgagattgaagtcaatataccagaa
aatgctcctgtaggttcttcagtaacacagctccatgccacagatgctgatataggtgaa
aatgccaggattcatttctatttcagcaatcttgtctccagcatggccaagaggctattt
cacctcaactctactactggacttatcacagtaaaagaaccactggatagggaggaatct
ccaaaccacaagttactggttttggcaagtgatggtggattgatgccagcaagagcaatg
gtgctagtaaatgttactgatgtcaatgataatgtcccattgattgacataagatacatc
atcaatccaatcaatggcactgtggttctttcagaaaatgctcctcttaacaccaaaatt
gctctcataactgtgacagataaggatgctgaccataatggtagggtgacatgctttaca
gatcatgaagtccctttcagattaaggccagtgttcagtaatcagttcctcctagagact
gctgcatatcttgactatgagtccacaagagaatatgccattaaattactggccgcagat
gctggcaaacctcctttgaatcaatcatccatgctcctcatcaaattaaaagatgaaaat
gacaatgctccagttttcactcagtctttcataagtctttctgttcctgagaataactct
cctggtacccagttgacaaaaataagtgcaacagatgcagacactgggcgtaatgctgag
atacattacctgctaggcattgatgctccgtctgaattcaacctggatcatcgtacaggc
attctgactgcagtgaagaaactggatagagaaaaacaggaaaaatattcattcacagtt
ctggcaaaagataatgggatgccatctttaataaccaatgccacagtcttagtaaccgtt
cttgatcagaatgacaacagtccaattttcactcacaatgagtacaacttctatgtccca
gaaaaccttccaagacatggcacagtaggactaatcactgtaactgatcctgattatgga
gaaaattctgcagtaactctctccattttagatgcaaatgatgacttcacaattgatcca
cagactggtgtcatccgaccgaatatttcatttgatagagaaaaacaagagtcttatact
ttctatgtaaaggctgaggatggtggtagggtatcacattcttcaactgccaaagtcact
ataaatgtggtcgatgtcaatgacaacaaaccagtttttgttgtccctccttccaactac
tcctttgaattggttccaccatccgctaatccaggcacagtggtcttcacagtagttgct
attgacaatgacactggcatgaatgcagagcttcgttacagcattgtaggagggaacaca
aaaggtctgtttatgattgaccaaacaacaggcaacattacactgaaggagaaatgtgtc
cttgcagatcttggtttacacaaactgatagtcaaagccaaggatttagggcaacctgat
tctctcttcagtgtcataaatgttaatctatttgtgaatgagtcgatgaccaatgctaca
ctgatttatgaattggtgcgcaaaaacattgaaacaccagtgacccaaaatattgagaca
actgatacatcctcaccatcaagtgactatgtcaagatcatggttgccattgttgctggc
accataactgtcattcttgttattttcatcactgctgtagtaagatgccgccaaacacca
caccttaaggctgctcagaaaaacaagcagaattccgaatgggttactccaaaccctgaa
aacaggcagatgatgatgatgaagaaaaagaagaagaggaagaagcatacccctaagaac
ttactgcttaactttgtcactattgaagaagctaaggcagaggatgctgataatgataga
aacaccgtcacactagaccttcccattgaattggaagagcaaaccatgggcaagtacaac
tggggcactacacctactactttcaagcctgacagccctgatttggcccggcactacaaa
tctgcctctccacagcctgctttccagatccagccggaaactcccctaaattcaaagcac
cacatcatccaggaactgcctcttgataatacctttgtgggttgtgattccatctccaag
tgttcctccagcagttctgatccctacagcgtttctgagtgcagctatccagtgacaact
ttcaagacccctgtgtctgtacacaccagactgccaatgaaggaagttgtacgatctcac
acacccatgaaagaaacaactactgtggagatctggactcatccccatccacagcggaaa
tctgaggggaaaaagacagtaaagtcccagcggcgtgtcacatttcacctaccagaatgc
tctcaagaaagcaacagtgatggtggactgggagatcatgatgcaggcagccttcccagc
acatcccatgccctgccccttggctatcctcaggaggagtactttgatcatgctgtaaac
aacaaccgcactgaaggggatggcaactcagatcctgaatccactttcattcctggacta
aagaaagctgcagaaatagctattcaacctactctggaagaggcctctgacaactgcact
caagaatgtctcatcttgggccactctgatgcctgctggatgccagcttctctgactcat
tccagcccttcacaggcacaggcctccactctatgccacagccctcccctgacgcagaca
actcttcgccgacgcaaccctctggtgacacaggcagttgctctctgccacagccctcca
atgagccaggctatagcactatgccacagccctccaccagcacagacctctgctctccac
cacagcccacctctagcacaggctcttcgccacagccctccaccagcacaggcctcagcc
ctttactacagccctcccctggcacaggctgctacaatccactgcagccctcctctgcca
cagcctgctgcccttcaccgcagccctgcacaaccaccaatgggtctgcagcagggttgg
gggcaaggtgctggccctgaaggactactttctcttgaccgaggagcacaaggtagtaca
agctctcagttttatgccatgtctgaaagacttcatcctagtgatgattcgattaaagtc
attcccttgacaaccttcaccacaggccaacaggctagaccctctagggatgattctcca
attatggaagaacatccataa
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