Odocoileus virginianus (white-tailed deer): 110127005
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Entry
110127005 CDS
T10722
Symbol
LSS
Name
(RefSeq) lanosterol synthase isoform X1
KO
K01852
lanosterol synthase [EC:
5.4.99.7
]
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr00100
Steroid biosynthesis
ovr01100
Metabolic pathways
Module
ovr_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
110127005 (LSS)
Enzymes [BR:
ovr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.7 lanosterol synthase
110127005 (LSS)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
Prenyltrans
Motif
Other DBs
NCBI-GeneID:
110127005
NCBI-ProteinID:
XP_020732671
UniProt:
A0A6J0W605
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Position
4:complement(83570918..83604812)
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AA seq
733 aa
AA seq
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MTEGTCLRRRGGPYKTEPATDLSRWRLSNKVGRQTWTYFQEEEDPGREQSGLEAHLLGLD
TKSFFKDLPKAHTALKGALNGVTFYAALQTEDGHWAGDYGGPLFLLPGLLITCHVAHIPL
PAGYREEIIRYLRSVQLPDGGWGLHIEDKSTVFGTALNYVSLRILGVGPDDPDLVRARNL
LHKKGGAVFIPSWGKFWLAVLNVYSWEGLNTLFPEMWLFPDWMPAHPSTIWCHCRQVYLP
MAYCYSTRLSAEEGPLVQSLRQELYVEDYSCIDWAAHRNSVAPDDLYTPHSWLLHLVYAI
LNLYERHHSTSLRQRATQKLHEHIAADDRFTKCISIGPISKTINMLVRWHTDGPASAVFQ
EHVSRIPDYLWLGLDGMKMQGTNGSQIWDTAFAIQALLEAGAQHRPEFWSCLQKAHEYLR
ISQVPDNFPDYQKYYRQMTKGGFSFSTLDCGWIVADCTAEALKSILLLQEKCPFVTNHVP
QERLFDAVAVLLSMRNPDGGFATYETKRGGHLLELLNPSEVFGDIMIDYTYVECTSAVMQ
ALKTFHKQFPDHRAREIRETLERGLQFCRQKQRPDGSWEGSWGVCFTYGTWFGLEAFACM
GHTYHNGAACAEISRACDFLLSRQTADGGWGEDFESCEQRRYVQSARSQIHNTCWALMGL
MAVRHPDVAALERGVSYLLEKQLPNGDWPQENISGVFNKSCAISYTSYRNVFPIWALGRF
SRLHPESALAGHP
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgacggagggcacgtgtctgcgtcgaagagggggaccctataagacagagccggccaca
gacctcagtcgctggcgactcagcaataaggttgggaggcagacatggacctactttcaa
gaagaagaagatcctggccgagagcagtctggcctggaagctcacctcttgggactggat
acaaagagtttctttaaggacttgccaaaagcgcacacagccctcaagggggctctgaat
ggggtgacattttacgctgcactgcagactgaggatgggcattgggcgggtgattacggt
ggcccgctcttcctcctgccaggcctcctgatcacgtgccatgtggcacacatccctctg
ccggctggataccgagaagaaattatacggtacctgcggtctgtgcagctccccgatggc
ggctggggcctgcacattgaggacaagtccacggtatttggaactgcgctcaactatgtg
tctttgagaattctgggtgtggggcctgatgatcctgacctggtgcgagcccggaacctt
cttcacaagaaaggtggtgccgtgttcatcccatcctgggggaagttctggttggctgtc
ctgaacgtgtacagctgggaaggcctcaatacactgtttccagaaatgtggctgtttcct
gactggatgcccgcacatccctccacgatctggtgccactgtcggcaggtgtacctgcct
atggcctactgctacagcacccggctgagtgccgaggagggcccgctggtccagagcctc
cgccaggagctctacgtggaggactacagctgcatcgactgggccgcacacaggaacagc
gtggccccggacgatctgtacacgccgcatagctggctgctccacctcgtgtacgccatc
ctcaacttgtacgagcgccaccacagcaccagcctgcggcagcgggccacccagaagctg
catgagcacatcgcggccgacgaccgcttcaccaagtgcatcagcatcggcccgatctcg
aaaaccatcaacatgctcgtgcgctggcacacagacgggccggcctctgctgtcttccag
gagcacgtgtccaggattcctgattatctctggctgggccttgacggcatgaagatgcag
ggtaccaatggctcacagatctgggacactgcgttcgccatccaggctttgctggaggca
ggtgcacaacacaggccggagttttggtcctgcctgcagaaggcacatgagtatctccgg
atctcccaggtgccagacaatttccccgactaccagaagtactaccgccagatgaccaag
ggcggcttcagcttcagcacgctggactgtggctggattgtggccgactgcacggctgag
gccttgaagtccatcctcctcctgcaggaaaagtgtccctttgttaccaatcatgtccca
caagagcggcttttcgatgctgtcgctgtgttgctgagcatgagaaaccccgacggaggg
tttgccacctatgagaccaagcgggggggacaccttctggagcttctgaacccctccgag
gtctttggggacatcatgattgactacacgtatgtggagtgcacctcagcagtgatgcag
gcactgaagactttccacaagcagttcccagaccacagggccagggagatcagggagacc
ctcgagcggggcttgcagttctgtcggcagaagcagaggcctgatggctcctgggaaggc
tcctggggcgtgtgcttcacgtacggcacctggtttgggctggaagccttcgcttgcatg
gggcacacctaccataatggggctgcctgtgcggagatctccagggcctgtgacttcctg
ctgtcccgacagacggcagacggaggctggggggaggacttcgagtcctgcgagcagcgt
cgctatgtgcagagtgcccggtcccagatccacaacacgtgctgggccctgatggggctg
atggccgtcaggcaccctgacgtggccgccctggagagaggagtcagctatctgcttgaa
aagcagctgcccaacggggactggccccaggagaatatcagcggggtcttcaacaagtcc
tgcgccatcagctacactagctacagaaacgtcttccccatctgggccctcgggcgcttc
tcccgtctgcaccccgagagcgccctcgctggccacccttga
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