Odocoileus virginianus (white-tailed deer): 110127286
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Entry
110127286 CDS
T10722
Symbol
COL13A1
Name
(RefSeq) collagen alpha-1(XIII) chain
KO
K16617
collagen type XIII alpha
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr04974
Protein digestion and absorption
Brite
Glycosaminoglycan binding proteins [BR:
ovr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
110127286 (COL13A1)
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NCBI-GeneID:
110127286
NCBI-ProteinID:
XP_070325938
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Position
7:59806299..59955501
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AA seq
733 aa
AA seq
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MVAERSGKATAAGARGPGELGAPGTVALAVAPAERCARLPSPGSCGLLALALCSLALSLL
AHFRTVELQARVLRLEAERGEQQMEPAILGRVNQLLDEKWKLHSRRRRETPKTSPGCHCP
PEQMESKEPQVLEDEVISTQGPAGRPGLPGDKGAIGMPGRVGGKGQPGEKGAPGDAGMSI
IGPRGPPGQPGTRGFPGFPGPIGLDGKPGRPGPKGEMGPQGQKGEKGQCGEYPHRLLPLL
NSVRLAPPPVIKRRTFQGEQGQAGIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPG
PKGDPGIQGYHGRKGERGMPGMPGKHGAKGEPGIPGVKGEKGAAGSPGPLGLLGQKGEKG
DAGNSIEGGRGEPGPPGLPGPPGQKGEAGADGPEGPPGQQGDKGDPGAPGDQGPTGPKGS
KGEPGKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGEKGEIGLPGPPG
LDGEKGPRGKPGDVGPPGPQGPPGKPGHAGMKGEDGLPGSPGEKGEKGETGQPGPPGLDG
PTGEKGEPGDPGRPGATGLPGPIGLPGFIGEKGEPGEKGDPGMEVPGPPGPEGPPGPPGL
QGVPGPKGEAGLDGAKGEKGVQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAGP
KGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGHRGFKGEKGEPGLPGLDGLDAPCPL
GEDGLPVQGCWNK
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggtagcggagcgctccggcaaagcgacagccgccggtgcccgcggccctggggagctg
ggcgcacccgggacagtggctctggcggtggcgccggcggagcgctgtgctcggctgccg
agccctgggtcgtgcgggctgctggcgctggctctctgctcgctggcgctcagcctgctc
gcccactttcggacggtcgagctgcaggcccgggtgctgcgcctggaagcggagcgtggg
gagcagcaaatggagccggctattttgggacgagtcaaccaactgctggatgagaaatgg
aagctccactcacggaggcgccgggagaccccgaagacgtccccaggatgccactgcccg
ccagagcaaatggagtcaaaggagccccaggtgttagaagacgaggtcatctctactcag
ggtcctgctggaagacccggcctcccgggggacaaaggtgccattgggatgcctggacgt
gtgggaggaaagggccaaccaggcgagaagggtgccccaggagatgccggcatgtccatc
attggtccccgcggcccccctggtcagccaggcacccgaggttttccaggatttccgggt
cccattgggctcgacggcaaaccgggccggccaggaccaaagggggagatgggacctcaa
ggacaaaagggagaaaagggtcagtgtggagagtacccacaccggctgctgcctctcctc
aattcagtgcggctggctccacccccagtcattaaaaggaggaccttccagggtgaacag
ggccaggctggcatccaaggcccgccagggccaccaggccctcccggaccgagcggacct
ctggggcacccaggactgccagggcccatggggccgcctggcttaccggggcctcctgga
ccaaagggagacccagggatccagggctaccacggccggaagggagaacggggcatgcca
gggatgccaggcaaacacggagcaaagggtgaacctgggatcccaggagtcaagggtgag
aagggggctgcggggtcccccgggccactcggcctcttggggcagaagggagaaaaaggt
gatgctggcaactccattgaaggaggcagaggggagcctggccccccagggcttcctgga
cccccagggcaaaagggggaagctggagcagatggcccggaaggccccccaggacagcaa
ggagacaagggggaccctggagcacctggagatcagggacctactggccccaagggctcc
aagggagaacctgggaaaggagagatggtggactacaacgggaacatcaacgaggctctc
caggagatccggacactggccttgatggggccccctggtcttcctgggcagatcggccca
cccggagctccagggatcccaggcgagaagggggagattggactgccaggccctcccgga
ctcgacggggaaaagggacctcgaggcaaaccaggagatgtgggccctcctggtccccaa
ggccccccaggaaagcctgggcatgcaggaatgaagggagaagacggcctcccggggagc
ccaggagagaagggggagaaaggggagacggggcagccaggaccaccgggtctagacggc
ccaactggggagaaaggagaaccaggtgacccagggagacccggcgcgactggacttcct
ggcccaatcgggctcccaggatttataggagagaaaggagaaccaggggagaagggtgac
ccaggaatggaggttcctgggccaccagggccagaggggcctcctggacctccggggctc
caaggcgttcctggaccaaagggggaagcaggactagacggagcaaaaggagaaaagggc
gtccagggagaaaaaggagaccgaggtcctctgggattacccggagcttcaggtttggac
ggcaggcctgggccaccgggtactccaggaccaatcggagttccaggcccagcaggacca
aaaggagagaggggcagcaaaggcgaccctgggatgacaggaccaacaggagcagctggg
cttcctggtttacatggaccacccggggacaaaggaaaccggggacaccgaggttttaaa
ggagagaaaggggagccggggttaccagggctggacggactggatgccccgtgcccattg
ggtgaagatggcttgccagtccagggctgctggaacaagtga
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