Odocoileus virginianus (white-tailed deer): 110127331
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Entry
110127331 CDS
T10722
Symbol
DCHS1
Name
(RefSeq) protocadherin-16
KO
K16507
protocadherin-16/23
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr04392
Hippo signaling pathway - multiple species
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04392 Hippo signaling pathway - multiple species
110127331 (DCHS1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ovr04515
]
110127331 (DCHS1)
Cell adhesion molecules [BR:
ovr04515
]
Cadherins
Cadherin related
110127331 (DCHS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
110127331
NCBI-ProteinID:
XP_070320284
LinkDB
All DBs
Position
Unknown
AA seq
3296 aa
AA seq
DB search
MQKERGTAPSCPGMRIPRSLPLLSWLMLLLLGAGAPGAWGQAGSLDLQIDEEQPAGTLIG
DISAGLPAGTAAPPMYFISAQEGSGVGTDLAIDEHSGVVRTARVLDRERRDRYRFTAVTP
DGATVEVTVRVADINDHAPAFPQARAVLQIPEHTALGTRYPLEPARDADAGRLGTQGYAL
SGDGAGETFRLETRPGSDGAPVPELVVTGELDRENRSHYMLQLEAYDGGSPPRRAQALLD
VTLLDINDHAPAFNQSRYHAAVSESLAPGSPVLQVYASDADAGANGAITYEINRRQSEGD
GPFSIDAHTGLLRLERPLDFEQRRVHELVVQARDGGAHPELGSAFVTVHVRDANDNQPSM
TVIFLSADGSPRVSEAAPPGQLVARISVSDPDDGDFAHVNVSLEGGEGHFALSTQDSVIY
LVCVARRLDREERDAYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPTFDRQLYRPEPL
PEVALPGSFVVRVTARDPDQGTNGQVTYSLAPGVHTRWFSIDPTSGIVTTAALLDYELEP
QPQLIVVATDGGLPPLSSSATVSVVLQDVNDNEPQFQRTFYNASLPEGTQPGTCFLQVTA
TDADSGPFGLLSYSLGAGLGTSGSPPFRIDAHSGDVCTTRTLDRDQGPSSFDFTVTAVDG
GGLKSMVYVKVFVSDENDNPPRFYPREYAASLSAQSAPGTAVLRVRAHDPDQGPHGRLSY
HILAGNSPPLFALDEHSGLLTVAWPLARRASSMVQLEIGARDGGGLQAEPSARVNISIVP
GTPVPPVFEQLQYVFSVPEDVAPGTSVGIVQAHNPPGRLGPVTLALSGGDPRGLFSLDGA
TGLLQTLRPLDRELLGPVLELEVRAGSGVPPAFTVARVRVLLDDVNDNSPAFPAPEDTVL
LPSSTAPGTLIYTLRALDPDSGVNSRVTFTLLAGGGGAFTVDPTTGHVRLMGPLGPPGGP
AHELELEARDGGSPPRTSQFRLRVVVQDLGTRGLAPHFDSPTYRVDLPSGTTPGTQVLQV
QARAPDGGPVTYHLAADGPGSPFGLEPQSGWLWVRAALDHEAQELYTLKVMAVSGSKAEL
GQQTATATVRVSILNQNDHSPRLSEEPTFLAVAENQPPGTSVGRVFATDRDSGLNGRLTY
SLRQLSEDSKAFRIHPQTGEVTTLQTLDRERQSSYQLLVQVQDAGSPPRSTTGTVHIAVL
DLNDNSPTFLQAAGAAGGGLPIQVPDGVPPGTLVTTLQAKDPDEGENGTILYMLTGPGSE
LFSLHPHSGELLTAAPLIRAERPHYVLTLSAHDQGSPPRSSSLQLLVQVLPSTRSAEPPP
EPSESDPVAPVPVVLTVTATEGLRPGSLLGSVAPPEQAGVGALTYTLVGGADPEGTFALD
AASGRLYLARPLDFEAGPAWRALTVRAEGPGGAGARLLRVQVRVQDENEHAPAFARDPLA
LALPENPEPGATLYTFRASDADGPGPNSDVRYRLLRQEPPAPALRLDARTGALSAPLGLD
RETTPALLLLVEATDRPANASRRRTARVSARVFVTDENDNAPVFASPSRVRLPEDQPPGP
TALHVVARDPDLGEAARVSYRLAAGADGYFRLHPGTGALSVVRSLDREQRAEYVLTVVAS
DHGSPPRSATQLLTVSVADVNDEAPAFPQQEYRVLLRENSPPGTSLLTLQATDPDLGTNG
QVTYGGISGENFSLDPDTGVLTTLRALDREEQEEINLTVYARDGGSPPLLTHVTVRVAVE
DENDHAPTFGSAHLSLEVPEGQDPQTLTTLRASDPDVGANGQLQYRILDGDPSGAFVLDL
ASGEFGTMRPLDREVEPAFQLQIEARDGGQPALSATLLVTVTVLDANDHAPAFPVPAYSV
EVPEDAPAGTLLLQLQAHDPDAGANGRVTYYLGTGAAGAFLLEPSSGELRTATTLDREQC
PSYAFTVNAVDSAAAGPLSTTVPVTITVRDVNDHTPAFPTSPLRLRLPRPGPVLSTPTLP
LATLRAEDRDAGANASILYRLAGTPPLGTTVDSYTGEIRVSRSPVSLSPRERVLFIVATD
LGRPARSATGVVIVGLQGESEHGPRFPRASSEAMLRENSPPGTPIVSPRATHAGGSSGPI
TYSILSGNEKGTFSIQPSTGAITVRSAEGLDFETNPRLRLVLQAESGGAYAFSVLTLTLQ
DANDNAPRFLQPHYVAFLPESRPLEGPLLQVEADDLDQGPSGQISYSLAASQPARGLFHV
DPATGTITTTAILDREIWAETRLVLMATDRGSPALVGSATLTVMVIDTNDNRPTIPQPWE
LRVSEDALLGSEIAQVTGNDVDSGPVLWYVLSPSGPQDPFSVGRYGGRLSLTGPLDFEQR
DRYHLQLLAHDGPHEGRANLTVLVDDVNDNAPAFSQTLYQVMLLEHTPPGSAILSVSATD
RDSGANGHVSYYLASPAEGFSIDPNNGTLFTTVGTVALGHEGPGMVDVVLEARDHGVPGR
AARATVHVQLQDQNDHAPSFTLPHYRVAVTEDLQPGSTLLTLEATDADGSRSHAAVDYSI
VSGNRGRVFQLEPRLAEAGEGDGLGPRALGCLVLLEPLDFESLTQYNLTVAATDRGQPPR
SSAVPVTVTVLDVNDNPPVFTRAAYRVAVPEDTPVGAELLHVEASDADPGPHGLVRFTLS
SGDPLGLFELDESSGDLRLARPLDCETQARHQLVVQAADPAGAHFALAPVTIEVQDVNDH
GPTFPLSLLSTSLAENQPPGTLVTTLHAIDGDAGAFGRLHYSLLEAGPGPEGREAFALNS
STGELRARVAFDYEHTGSFQLLVGATDAGNLSASVTVSVLVTGEDEYDPVFLAPAFHFQV
PEGARRGHSLGHVQATDEDGGADGLVLYSLAASSPYFGINQTTGALYLRVDSRAPGSGTG
TSGGGGRTRREAPRELRLEVVARGPLPGSRSATVPVTVDITHTALGLAPDLNLLLVGAVA
ASLGVVVVLALAALVLGLVRARSRKAEAAPGPMSQAAPLASGSLQKLGREPPSPPPSEHL
YHQTLPSYGGPGAGGPYPRGGSLDPSHSSGRGSAEAAEDDEIRMINEFPRVASVASSLAA
RGPDSGIQQDADGLSDTSCEPPAPDTWYKGRKAGLLLPGAGATLYREDGPPAAATTFLGG
CGLSPAPTGDYGFPADGKPCVAGALTAIVAGEEELRGSYNWDYLLSWCPQFQPLASVFTE
IARLKDEARPCPPAPRIDPPPLITAVAHPGAKSVPPKPASTAATRAVFPPASHRSPISHE
GSLSSAAMSPSFSPSLSPLAARSPVVSPFGVAQGPSASALSAESGLEPPDDTELHI
NT seq
9891 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaggagcggggcactgcaccttcgtgcccgggcatgcggatccccaggtccctc
cccctgctatcatggctgatgctgctgctcctgggggccggggcgccgggtgcctggggt
caggctgggagcttggacctgcagattgatgaggagcagccagcgggcacgctgattggg
gacatcagtgcggggcttccagcgggcacagcagcacctcccatgtacttcatctctgcc
caggagggcagcggggtgggcacggacctggccatcgatgaacacagtggggtggtccgt
acagcccgtgtcctggaccgcgagcggagggatcgctaccgcttcactgcagtcactccc
gacggcgccactgtggaagttaccgtgcgagtggctgacatcaatgaccacgctccggcc
ttcccacaggctcgggctgtcctgcagatacctgagcatacagcgcttggcactcgctac
ccactggagcccgctcgtgatgcggacgctggccgcctgggaacccagggctatgccctg
tctggtgatggggctggagagaccttccggctggagacacgccctggttcggatggggcc
ccagtgcctgagctggtagttactggagagctggaccgagagaaccgctcacactacatg
ctgcaactggaggcctacgacggtggttcaccccctcggagggcccaggccctgctggac
gtgacactgctagacatcaatgaccacgccccagctttcaatcagagccgctaccatgct
gcggtgtctgagagcctggcccccggcagtcctgtcttgcaggtgtatgcctctgatgcc
gatgcaggtgccaacggggctataacttacgagatcaaccggaggcagagcgagggtgac
ggacccttctccattgacgcgcacacggggcttctgcgcctggagcggccgctggacttt
gagcaacgtcgggtccacgaactggtggtgcaggctcgggatggaggggctcatcctgaa
ctgggctcggcctttgtgaccgtgcatgtgcgagacgccaatgacaatcagccctccatg
actgtcatcttcctgagtgcagacggctccccccgtgtatctgaggctgcccccccgggc
cagcttgttgctcgaatctctgtgtcagacccagatgatggtgactttgcacatgtcaat
gtgtccctggagggtggagagggccactttgcgctcagcacccaggacagcgtcatctac
ctggtgtgtgtggctcggcggctggatcgagaggagcgcgacgcctacaacttgcgagtt
accgccacagactctggctcacccccactgcgggccgaggctgcctttgtgctacacgtc
actgatgtcaacgacaatgcgcctacttttgaccgccagctctaccgacccgagcctctg
cctgaggttgccctgcctggcagcttcgtggtgcgggtgacggcccgggatcctgaccag
ggcaccaatggtcaggtcacctacagcctggccccaggcgtccacacccgctggttctcc
atagaccccacctcaggcattgtcactacggctgctttgctggactatgagttggaaccc
cagccacagctaatcgtggtggccacggatgggggcttgccccctctctcctcctctgcc
acagtgagcgtggttttgcaagatgtgaatgataacgagccgcagttccagagaactttc
tacaacgcctcactgcctgagggcactcagccgggaacctgcttcctgcaggtgacagcc
acagatgcagacagtggcccatttggcctcctctcctattccttgggtgccggacttggg
acctcagggtctcccccgttccgcatcgacgcccacagtggtgacgtgtgcacgacccgg
accctggaccgcgatcaggggccctcaagctttgacttcacagtgacagctgtggatggg
ggaggcctcaagtctatggtatatgtgaaggtgtttgtgtcagacgagaatgacaaccca
cctcggttttatcctcgggagtacgctgccagtctgagcgcccagagtgcaccaggcaca
gctgtgctgagggtacgtgcccacgaccctgaccagggaccccatgggcgactctcctac
cacatcctggctggcaacagccccccgctctttgccttggacgagcactcagggctattg
acggtagcctggcccttggccagacgggccagttccatggtgcagctggagatcggggct
cgggatggaggtggcctgcaggcagagcccagtgcccgagtcaacatcagcattgtgcct
ggaactcctgtaccaccagtatttgagcagcttcagtatgtcttttctgtgccagaggat
gtggcaccaggcaccagtgtgggcatagtccaggcacacaatccaccaggtcgcttgggg
cctgtgaccctcgccctgtcggggggggatccccgaggactcttctccctagatggggcc
actgggctgttacagacgcttcgccctctggatcgggagctgctgggaccagtgctggag
ctggaggtgcgggcaggcagtggggtgccaccggctttcactgtagctcgtgtgcgcgtg
ctgctggatgacgtgaacgacaactcccctgccttccctgcgcctgaagacacggtgctg
ctgccatcgagtactgccccagggaccctcatctatacactgcgggctctggaccccgac
tcgggtgttaacagtcgagtcacctttaccctgctcgctgggggtggtggggccttcact
gtggaccccacaacaggccacgtacggcttatgggacctctggggcctccgggggggcca
gcccatgaactggagctggaagcccgggatggaggctccccacctcgcaccagccaattt
cgactgcgggtggtggtacaggacttggggacccgtgggctggctccccacttcgacagc
cctacctaccgtgtagacctgccctcaggcaccacccctggaactcaagtcctgcaagtg
caggctcgagcaccagatgggggccctgtcacctaccaccttgcagcagatgggccaggt
agcccctttggcctggaaccacagagtggatggctgtgggtgcgggcagcactggaccat
gaggcccaggagttgtatacactgaaagtaatggcagtgtctggatccaaagctgagttg
gggcagcagacagccacggccactgtgagggtcagcatcctcaaccagaacgaccacagt
ccccgcttgtctgaggagcccaccttcctggctgtggctgagaaccagcccccagggacc
agcgtgggtcgggtctttgccactgaccgagactcaggactcaatggacgtctgacctac
agcctgcgacagctgtcagaagacagcaaggccttccgcatccacccccagactggagag
gtgaccacactccaaactctggaccgcgagcggcagagcagctaccagcttctggtgcag
gttcaggatgcggggagcccaccgcgcagcaccacgggcaccgtacacatcgcagtgctt
gacctcaatgacaacagccccaccttcctgcaggccgcaggggctgcgggtggaggcctc
cccatacaggtgccagatggtgtgcctccaggaacactggtgaccactctgcaggccaag
gatccagatgagggggagaatggaaccatcctgtacatgctaactggtcctggctcagag
ctcttctctctgcaccctcactcgggagagctgctcaccgcagcacccctgatccgagca
gagcggccacactacgtgctgacattgagcgctcatgaccaaggcagcccccctcggagc
tccagcctccagctgctcgtgcaggtgcttccctccactcgctcggctgagcctccaccg
gaaccctcagagtcagacccggtggcgcctgtgcctgtcgtgctgaccgtgacagcaacc
gaggggctccggcccggctccctgttgggctccgtggcaccgccggagcaggcgggggtg
ggcgcccttacttacacactggtgggcggcgccgacccagagggcacctttgcgctggac
gcggcctcggggcgcttgtacctggcgcggcccctggacttcgaggcgggtccggcttgg
cgcgcgctcacggtgcgcgccgaggggccgggaggcgcgggcgcgcggctgctgcgagtg
caggtgcgcgtgcaggacgagaacgagcatgcgccggccttcgcgcgcgacccgctggcg
ctggcgctcccggagaaccccgagccgggcgcgaccttgtacactttccgcgcgtccgac
gccgacggccccggccccaacagcgatgtgcgctaccgcctgctgcgccaggagccgcct
gcgcccgcgcttcgcctggacgcgcgcaccggggcgctaagtgccccgctaggcctggat
cgggagaccactcccgctctgctgctgctcgtggaagccactgaccggcccgccaacgcc
agccgccgccgcacagcacgcgtttccgcgcgcgtctttgtcacggatgagaatgacaac
gctccagtctttgcctcaccgtcacgtgtgcgcctccctgaggatcagccgcccgggccc
acggcgctgcacgtagtagcccgggaccccgacctgggcgaggccgcacgggtgtcctat
cgcctggcagctggcgcagacggctatttccggctacaccccggcaccggagcgctgtcc
gtggtgcggtctctggaccgcgaacagcgagccgagtacgtgctgactgtggtggcctcc
gaccacggctcgcccccgcgctcggccacgcagcttctgactgtcagtgtcgccgacgtc
aacgacgaggcacccgctttcccacagcaggagtaccgcgtcctcttgcgggagaacagc
ccgcctggaacatctctgctcactctgcaggcaaccgacccggatctggggaccaatggg
caagtgacttatggaggcatctctggcgaaaacttctccctggacccagacactggggtc
cttaccactcttcgggccctggatcgggaggagcaggaggagatcaatctgacagtatat
gcccgggacgggggctcacctccactgttgacccatgtcacagtgcgagtggctgtggag
gatgagaatgaccatgccccaacctttgggagtgctcatctttccctggaggtgcccgag
ggccaggacccccagacccttaccacgctgcgggcctctgacccagatgtgggagccaac
gggcagctgcagtaccgcatcctggatggggacccctcaggagcctttgtcctggaccta
gcttctggggagtttggcaccatgaggccactagaccgggaggtggagccggcattccag
ctgcagatagaagcccgggatggaggccagccagctctcagcgctacgctgcttgtgaca
gtgacagtgctggatgccaatgaccatgccccagccttccctgtgcccgcctactctgtg
gaggtgcctgaggacgcacctgcagggaccctgctgctgcagctgcaggctcatgatcct
gatgctggggccaatggtcgtgtgacctactacctgggtacaggtgcagcaggagccttc
ctgctagagcccagctctggggaattgcgcacagccaccacccttgacagagagcagtgt
cccagctatgcctttacagtgaatgcagtggacagcgcagctgctgggcccctaagcacc
acggtgcccgtcaccatcacagtgcgtgatgtcaatgaccacacacccgccttccccacc
agtcccctgaggctgcgcctgccccgcccaggccctgtcctcagcactccaactctgcct
ctggccactttgcgagctgaagaccgtgacgctggtgccaatgcctccatcctgtaccgg
ctggcaggcacaccacctcttggcaccaccgtggactcttacactggggaaatccgcgtg
tcccgctcccctgtatctctgagcccccgagagcgtgtcctcttcattgtggcaactgac
cttggccgtccagctcgctctgccactggtgtggtcattgttgggctgcagggggagtct
gagcatggaccccgctttccccgggccagtagtgaagccatgctccgtgagaattcgccc
ccagggactcccattgtctcccccagggctacccatgcagggggttcaagtggacccatc
acatacagcattctcagtgggaatgagaaagggacattctccatccagcctagtacagga
gccatcacagtccgctcagcagaggggctggattttgagacaaacccacggctgcgactg
gtgctgcaggcagagagtggaggagcctatgccttctccgtgctgaccctaaccctgcaa
gatgccaatgacaatgcgccccgcttcctgcagccccactacgtggccttcctgccagag
tccaggcccttggagggacccctgctgcaggtggaagcagatgacctggaccaaggcccc
agtggacagatctcctacagtctggccgcatcccagccagcccggggattgttccatgta
gacccagccacgggcactatcaccaccacagctatcctggaccgcgagatctgggctgaa
acacggctggtgctgatggccacagacagaggaagcccagccctggtgggctcagctacc
ctgacggtgatggtcatcgacaccaatgacaatcgccccaccatcccccagccctgggag
ctccgagtgtcagaagatgcactgttgggctcggagatcgcacaggtaacagggaatgat
gtggactcaggaccagtgctgtggtatgttctgagcccttctgggccccaggatcccttc
agtgttggccgctatggaggccgcctctccctcacgggccccttggattttgagcagcgc
gaccgctaccacctgcagctcctggcacacgacgggcctcacgagggccgggccaacctc
acagtgctcgtggatgatgtcaatgacaacgcacctgccttctcacagactctctaccag
gtgatgctgcttgagcacacaccgccgggcagtgccattctctctgtctcggccactgac
cgggactccggtgccaacggtcatgtctcctactacctggcttcccctgctgagggcttc
agcattgaccccaacaatgggaccctgttcacaacagtggggacagtggccttgggccat
gaagggccaggcatggtggatgtggtgctggaagcccgagaccatggagtgccgggtcgg
gccgcccgcgccacagtgcacgtgcagctgcaggatcagaacgaccacgccccgagcttc
acactgccacactaccgtgtggctgtgactgaggatctgcagcccggctccaccctgctc
accctggaggccacagacgccgacgggagccgcagccacgccgcggtggactacagcatt
gtcagtggcaaccggggccgagtcttccagctggaaccccggctggcagaggctggggag
ggtgatggactaggcccccgggccctgggttgcctggtgttacttgagcctctagacttt
gaaagcctcacccagtacaacctaactgtagcggcaactgaccgggggcagccacctcga
agttcggctgtgccagtcactgtcaccgtgctggacgtcaacgacaacccacctgtcttc
acccgagcggcctaccgtgtggcggtgcctgaggacacgcctgtgggagccgagctgctg
cacgtggaggcctccgacgctgatccaggcccccatggccttgtgcgcttcaccctcagc
tcaggcgaccctctggggctctttgagctggatgagagctccggggacttgcgactggcc
cgccctttggactgtgagacccaggctcgacatcagcttgtcgtgcaggctgccgaccct
gccggggcacactttgctctagcaccagtgaccatcgaggtccaggacgtgaatgaccac
ggccccaccttccctctgagcttgctcagcaccagcctagctgagaaccagcctccaggc
actctcgtgaccaccctgcatgcaatcgatggggatgccggggctttcggaaggctccac
tacagcctgctggaggctgggccggggcctgagggccgcgaggcgtttgcgctgaacagc
tcaactggggagttgcgggcacgagtggcctttgactacgagcacactggcagcttccag
ctgctggtgggcgctacggatgctgggaacctgtccgcctcagtcaccgtgtcggtgctg
gtgactggtgaggatgagtatgacccagtgttcctggctccagctttccacttccaggtg
ccagaaggtgcgcggcgtggccacagcctgggtcacgtgcaggccacagacgaggatgga
ggtgctgacggcctggtgctgtactcgctggccgcctcgtccccctattttggtatcaac
cagactacaggtgccctgtacctgcgggtggacagccgggcaccaggcagtggaacaggc
acctccgggggtgggggccggacccgacgtgaggcaccgcgagagctgaggctggaggtg
gtggcacgggggcctctgcctggttctcggagcgccacggtgcctgtgactgtggacatc
acccacaccgcgctgggcctggcccctgacctcaacctgctcttggtgggggctgtggcg
gcctctctgggagtcgtggtggtgcttgccctggcagcccttgtcctgggactggtgcgg
gcccggagccgcaaagctgaggccgcgcctggcccgatgtcccaggcggcacccctggcc
agcggctcgctgcagaagctgggccgagagccacccagcccgccgccctcagagcacctg
tatcaccagactctccccagctatggtgggccaggagctggaggaccctacccccgtggt
ggctccctggacccttcacactcaagcggccgaggctcagcagaggctgcggaagatgac
gagatccgcatgatcaacgagttcccccgcgtggccagtgtggcctcctccctggctgcc
cgcggccctgactccggcatccagcaggatgcagacggactgagtgacacctcctgcgag
ccacctgcccccgacacctggtataagggtcgtaaggcagggctgctgctgccgggtgca
ggagccaccctgtaccgggaagacggccccccagccgctgccaccaccttcctggggggc
tgtggcctaagccctgcccctactggggactatggttttccagcagatggcaagccctgt
gtggcgggagcgctgacggccattgtggccggtgaggaagagctccgtggcagctacaac
tgggactacctgctgagctggtgccctcagttccagccgctggccagtgtcttcacagag
atcgcccggctcaaggatgaagctcggccgtgtcccccggcaccccgtattgacccaccg
cccctcatcactgccgtggcccacccgggagccaagtctgtgccccccaagccagccagc
acggccgcaacccgggccgtcttcccaccagcctctcaccgctcccccatcagccatgaa
ggttccctgtcctcggcggccatgtcccccagcttctcaccttcactgtctcctctggcc
gctcgctcacccgtcgtctcaccattcggggtggcccagggcccctcagcctcagctctg
agcgcagagtctggcctggagccaccagacgacaccgagctccatatctag
DBGET
integrated database retrieval system
