Odocoileus virginianus (white-tailed deer): 110127410
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Entry
110127410 CDS
T10722
Symbol
GCNT1
Name
(RefSeq) beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase
KO
K00727
beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase [EC:
2.4.1.102
]
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr00512
Mucin type O-glycan biosynthesis
ovr01100
Metabolic pathways
Module
ovr_M00056
O-glycan biosynthesis, mucin type core
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
110127410 (GCNT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ovr01003
]
110127410 (GCNT1)
Enzymes [BR:
ovr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.102 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase
110127410 (GCNT1)
Glycosyltransferases [BR:
ovr01003
]
Glycan extension
O-Glycan
110127410 (GCNT1)
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Gene cluster
GFIT
Motif
Pfam:
Branch
Motif
Other DBs
NCBI-GeneID:
110127410
NCBI-ProteinID:
XP_020733273
UniProt:
A0A6J0W6A7
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Position
18:complement(9696677..9898623)
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AA seq
428 aa
AA seq
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MLRKLWRRKLFSYPTKYYFLFLVFSLVTFTVLRIHQKPEFVNFGHLELFEENPSSNINCT
KILQGDVDEIQKVKLETLTVKFKKRTRWTNYDYINMTGDCASFIKKRKYIIEPLSKEEAE
FPIAYSIVVHHKIEMLDRLLRAIYMPQNFYCIHVDTKSEESFLAAAVGMASCFSNVFVAS
QLESVVYASWSRVQADLNCMQDLSRMNADWKYLINLCGMDFPIKTNLEIVRKLKLLMGEN
NLETERMPSHKKERWKKHYEVVNGKLTNTGTDKIHPPLETPLFSGSAYFVVSREYVEYVL
QNQNIQKFMEWAKDTYSPDEYLWATIQRIPEVPGSLSLSHKYDTSDMQAIARFVKWQYFE
GDVSKGAPYPPCGGVHVRSVCVFGAGDLNWLLRVHHLFANKFDPDIDLFAIQCLDEHLRH
KALETLKP
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggaagttgtggaggaggaaacttttttcttatcccactaaatactacttctta
tttcttgttttttcgctggtcacattcactgttttaagaattcatcaaaagcctgaattt
gtaaattttggacatttggagctgtttgaagagaatcctagtagtaatattaattgcacc
aaaattctacagggtgatgtagatgaaatccaaaaggtgaagcttgagactctaacagtg
aaatttaagaagcgcactcgatggacaaactatgactacataaacatgactggtgattgt
gcttctttcatcaagaagcgcaaatatattatagaaccacttagtaaagaagaggcggag
tttccaatagcatattctatagtggttcatcacaaaattgaaatgcttgacaggctcctg
agggccatctacatgcctcagaatttctattgtattcacgtggacacaaaatcagaggaa
tcgtttttggctgcagctgtgggcatggcatcctgcttcagtaatgtctttgtcgccagt
cagctggagagcgtggtgtatgcatcctggagccgggttcaggctgaccttaactgcatg
caggacctctccaggatgaatgcagactggaagtacctgataaatctctgcggaatggat
tttcctattaaaaccaacctggaaattgtcaggaagctcaagttgttgatgggtgagaac
aacctagaaacggagagaatgccatcccataaaaaagaaaggtggaaaaagcattatgaa
gtcgtgaatggaaagctgaccaacacgggaactgacaaaatacatccacctcttgaaaca
cctctcttttcaggaagtgcctattttgtggtcagtagggaatatgtggagtacgtgctc
cagaaccaaaatatccaaaagtttatggagtgggccaaagacacatacagccctgacgag
tatctctgggccactattcagaggatccccgaagtcccaggctcactgtccttgagccat
aagtacgacacgtctgacatgcaggcgattgccaggtttgttaaatggcagtactttgaa
ggagacgtttccaagggcgccccctacccgccgtgcggcggcgtccacgtgcgctccgtg
tgcgttttcggagccggtgacttgaactggctgttgcgcgtgcaccacttgtttgccaac
aaattcgacccggacatcgacctctttgccatccagtgtttggatgagcatctgaggcat
aaagccctggagacgttaaaaccctga
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