Odocoileus virginianus (white-tailed deer): 110127554
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Entry
110127554 CDS
T10722
Symbol
TIA1
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1 isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
ovr Odocoileus virginianus (white-tailed deer)
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ovr03019
]
110127554 (TIA1)
03041 Spliceosome [BR:
ovr03041
]
110127554 (TIA1)
Messenger RNA biogenesis [BR:
ovr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
110127554 (TIA1)
Spliceosome [BR:
ovr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
110127554 (TIA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
RRM_3
Calcipressin
Motif
Other DBs
NCBI-GeneID:
110127554
NCBI-ProteinID:
XP_070336767
UniProt:
A0ABM4J9M2
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Position
2:complement(65080748..65111466)
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AA seq
414 aa
AA seq
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MRKEQTLACTHCIFCLSSPSWQQKVSLLPSEANPRYVGNLSRDVTEALILQLFSQIGPCK
NCKMIMDVRTAGNDPYCFVEFYEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTS
SSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFV
SFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPS
NCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGT
TIEGHVVKCYWGKETLDMINPVQQQNQIGYPQAYGQWGQWYGNAQQIGQYMPNGWQVPAY
GMYGQPWNQQGFNQTQSSPPWMGPNYGVQPPPGQNGSMMPNQPAGYRVAGYETQ
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaagaacagacactggcctgcacccattgtatcttctgcctatccagcccatca
tggcagcaaaaggtgtccctccttccatcagaagcaaaccccagatatgttggtaacctt
tccagagatgtcacagaagctttaattctccagctctttagccagattggaccttgtaaa
aactgcaaaatgattatggatgtaaggacagctggaaatgatccgtattgttttgtggag
ttttatgagcatcgtcatgcagctgcagcactagctgctatgaatgggcggaagataatg
ggtaaggaagtcaaagtgaattgggcaacaactcccagcagtcaaaagaaagacacaagc
agtagtaccgttgtcagcacacagcgttcacaagatcatttccatgtctttgttggtgat
ctcagtccagaaattacaactgaagatataaaagctgcttttgcaccatttggaagaata
tcagatgcccgagtggtaaaagacatggcaacaggaaagtctaagggatatggctttgtc
tcctttttcaacaaatgggatgctgaaaacgccattcaacagatgggtggccagtggctt
ggtggaagacaaatcagaactaactgggcaacccgaaagcctccagctccaaagagtaca
tatgagtcaaacaccaaacagctatcatatgatgaggtcgtaaatcagtctagtccaagc
aactgtactgtgtactgtggaggcgtcacttccgggctaacagaacaactaatgcgtcag
actttttcaccatttggacaaataatggaaattcgagtctttccagataaaggatattct
tttgttcggttcaattcccatgaaagtgcagcacatgcaattgtttctgttaatggaact
actattgaaggccatgttgtgaaatgctattggggcaaagaaactcttgatatgataaat
cctgtgcaacagcagaatcaaattggatatccacaagcttatggccagtggggccagtgg
tatgggaatgcacaacaaattggccagtatatgcctaatggttggcaagtacctgcatat
ggaatgtatggccagccatggaaccagcaaggatttaatcagacacagtcttctccacca
tggatgggaccaaattatggagtgcagccacctccaggacagaatggcagcatgatgcct
aatcagcctgcagggtatcgagtggcagggtatgaaacccagtga
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