Odocoileus virginianus (white-tailed deer): 110127835
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Entry
110127835 CDS
T10722
Symbol
TRPC4
Name
(RefSeq) short transient receptor potential channel 4 isoform X1
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr04360
Axon guidance
ovr04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
110127835 (TRPC4)
09158 Development and regeneration
04360 Axon guidance
110127835 (TRPC4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ovr04040
]
110127835 (TRPC4)
Ion channels [BR:
ovr04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
110127835 (TRPC4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
PKD_channel
Motif
Other DBs
NCBI-GeneID:
110127835
NCBI-ProteinID:
XP_020733872
UniProt:
A0A6J0W867
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All DBs
Position
8:22617200..22820293
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AA seq
981 aa
AA seq
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MNMAQFYYKRNVNAPYRDRIPLRIVRAESELSPSEKAYLNAVEKGDYASVKKSLEEAEIY
FKININCIDPLGRTALLIAIENENLELIELLLSFNVYVGDALLHAIRKEVVGAVELLLNH
KKPSGEKQVPPILLDKQFSEFTPDITPIILAAHTNNYEIIKLLVQKGVSVPRPHEVRCNC
VECVSSSDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQLSWELQELSKVENEFK
SEYEELSRQCKQFAKDLLDQTRSSRELEIILNYRDDNSLLEEQSGNDLARLKLAIKYRQK
EFVAQPNCQQLLASRWYDEFPGWRRRHWAVKMVTCFIVGLLFPVFSVCYLIAPKSPLGLF
IRKPFIKFICHTASYLTFLFLLLLASQHIDRSDLNRQGPPPTIVEWMILPWVLGFIWGEI
KQMWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIVAFVKYSALNPRESWDMWHPTLVAE
ALFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLY
FYYEETKGLSCKGIRCEKQNNAFSTLFETLQSLFWSIFGLINLYVTNVKAQHEFTEFVGA
TMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFEEGGTLPTPFN
VIPSPKSLWYLIKWIWTHLCKKKMRRKPESFGTIGRRAADNLRRHHQYQEVMRNLVKRYV
AAMIRDAKTEEGLTEENFKELKQDISSFRFEVLGLLRGSKLSTVQSAQSTKESSNSADSD
EKSDNEGSSKDRKKNFSLFDLTTLIHPRSAAIAAERHTISNGSALVLQEPPREKQRKVNF
VTDIRHFGLFHRRSKQHAAAEQNANQIFSVSEGVARQQAEGPLERSIQLESRALASRGDL
NIPGLSEQCILVDHRERNTDSLGVQVSKRVCSFKSEKVVVEDTVPIIPKEKKHAKEEDSS
VDYDANLTDTVTHEDYVTTRL
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgaacatggcgcagttctattacaaaagaaatgttaacgccccctatcgagaccgcatc
cctctcaggatagtccgggcagaatctgaactctcaccgtccgagaaagcctacctaaat
gctgtggaaaagggagattatgcaagcgtcaagaaatccctagaagaagctgagatttat
tttaaaatcaatattaattgcatcgatcctcttggaagaactgctcttctcattgcaatt
gaaaatgagaacttggagctcatcgaactcctcctaagcttcaacgtctatgttggagac
gccctattacatgctatcaggaaagaagtcgtgggagctgtcgagcttctgctgaaccac
aaaaagcccagtggagaaaaacaggtgcctcctatactccttgataagcagttctctgaa
ttcactccagacattacgcccatcattttggcagcccatacaaataattatgagataata
aaacttctggttcagaaaggcgtctcagtgcccagaccccacgaggtccgctgtaactgc
gttgaatgcgtgtctagctcagatgtggacagtctccgccattctcgctccagactcaac
atctacaaggccctggccagcccctctctcattgccctgtccagtgaagacccttttctc
acagcctttcagttgagttgggagctccaggaactgagtaaggtggaaaatgaattcaag
tcagagtatgaggagctgtctcgtcagtgcaaacaatttgctaaggacctactggatcag
acaagaagttcccgagagctggaaatcattcttaattaccgcgatgacaacagtctcctg
gaagaacaaagtggaaacgatctcgcgagactcaaattggccattaagtaccgtcagaaa
gagttcgtggctcagcccaactgtcaacaactgctggcgtctcgctggtacgacgagttc
cccggctggaggcgacgtcactgggccgtgaagatggtgacgtgtttcatagtaggactc
ctcttccccgtcttctctgtgtgctaccttatagctcccaaaagccccctcggactcttc
atccgaaagccgtttatcaagttcatctgccacacagcctcctatttgacttttctgttc
ctgctcctgcttgcctctcagcacatcgacaggtcagacttgaacaggcaaggtccacca
ccaaccatcgtcgagtggatgatattaccgtgggtcctgggttttatatggggagagatt
aaacaaatgtgggatggtggacttcaagattacatccatgattggtggaacttaatggat
tttgtgatgaactccttatacctagcaacaatctccttgaaaatcgttgcatttgtaaag
tacagtgctcttaatccacgtgaatcttgggacatgtggcaccccacgctggtggctgaa
gctttgtttgctattgcaaatatattcagttccctgcgtctgatctcactgttcactgca
aattctcacctggggcctctacaaatatctctgggaagaatgctcctggacatcttgaag
tttctgttcatctactgccttgtgctgctagcatttgccaatggcctaaatcagttgtac
ttctattatgaagaaacaaaagggttaagctgcaaaggcatacgatgtgaaaagcagaat
aacgccttttcaacgttatttgagacactccagtccctgttttggtcaatatttgggctc
atcaacttatatgtgaccaatgtcaaagcgcagcacgaattcaccgagtttgttggtgcc
accatgtttgggacatacaacgtcatctctctggttgtcctgcttaacatgctaatagct
atgatgaataattcttaccagcttattgctgaccatgcggatatagaatggaaatttgct
agaacaaagctttggatgagttattttgaagaaggaggtacccttcctacccccttcaat
gtcatcccgagccccaagtctctctggtacctgatcaaatggatatggacacacctgtgc
aagaaaaagatgagaagaaagccagaaagttttggaacgatagggaggcgagctgctgat
aatttgagaagacatcaccaatatcaagaagttatgcggaacctggtaaagcgatacgtg
gccgcaatgattagagatgccaaaactgaggaaggtctgacagaggagaactttaaggaa
ctcaagcaagacatttctagcttccgctttgaagtcctggggttattaagaggaagcaaa
ctctctacggtccagtctgctcagagcacgaaggagtcttctaactccgcagactcggat
gaaaagagtgataacgagggtagcagcaaggacaggaaaaagaacttcagtctcttcgac
ctgaccaccctcattcacccgcgatcagcggcaattgccgccgaaagacacaccatcagc
aacggctccgcactggtgctgcaggagcccccgagggagaagcagagaaaagtgaatttt
gtgaccgatatcagacactttgggttgtttcacagacgatcgaaacaacacgccgccgcc
gagcaaaacgcaaaccagatcttctccgtgtcagaaggcgtggcccgccaacaagctgaa
ggacccctggaaaggagcatccagctggagtcccgagctttagcttcgcggggtgacttg
aacatcccggggctcagcgaacagtgtatattggtagatcatcgagaaagaaatacagac
tccctgggtgtacaggtgagcaagagagtgtgttcattcaagtcagagaaggtggtggtg
gaggacacggttcccatcataccaaaggagaagaaacacgcgaaagaggaggactcgagt
gtagactatgatgcaaacctcacagacaccgtcacccacgaagactatgtgaccacaagg
ttgtga
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