Odocoileus virginianus (white-tailed deer): 110127945
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Entry
110127945 CDS
T10722
Symbol
SHMT2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial isoform X1
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr00260
Glycine, serine and threonine metabolism
ovr00630
Glyoxylate and dicarboxylate metabolism
ovr00670
One carbon pool by folate
ovr01100
Metabolic pathways
ovr01200
Carbon metabolism
ovr01230
Biosynthesis of amino acids
ovr01240
Biosynthesis of cofactors
ovr01523
Antifolate resistance
ovr04981
Folate transport and metabolism
Module
ovr_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
110127945 (SHMT2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
110127945 (SHMT2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
110127945 (SHMT2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
110127945 (SHMT2)
09160 Human Diseases
09176 Drug resistance: antineoplastic
01523 Antifolate resistance
110127945 (SHMT2)
Enzymes [BR:
ovr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
110127945 (SHMT2)
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Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
110127945
NCBI-ProteinID:
XP_020734034
UniProt:
A0A6J0WDJ5
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Position
24:complement(51591975..51599092)
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AA seq
504 aa
AA seq
DB search
MLSFSFIWATRPLRRCGQLVGMAVRCQHSEAAQTQTGEASKGWSGQESLSDSDPEMWDLL
RREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQ
RRALEAFDLDPAQWGVNVQPYSGSPANLAAYTALLQPHDRLMGLDLPDGGHLTHGYMSDV
KRVSATSIFFESMPYKLNPETGLIDYEQLALTARLFRPRLIIAGTSAYARLIDYARMREV
CDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKTLRGARAGLIFYRKGVRAVD
PKSGRETPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQILKNARA
MADALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAIT
PGGLRLGAPALTSRGFREDDFRKVVGFIDEGVNIGLEVKSKTTKLQDFKSFLLKDPETSH
QLADLRQRVEQFARAFAMPGFDDH
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgttgtccttctcttttatttgggcgactcggcctctgcggagatgtggtcagctggtt
gggatggccgtacggtgccaacacagtgaggctgcccagactcagaccggagaagcaagc
aagggctggtcaggccaggagagtctatcagacagtgatcctgagatgtgggatctgctg
cggagagagaaggacaggcagtgtcgcggcctggagctcattgcttcagagaacttctgc
agccgagctgcgctggaggcgctggggtcctgtctgaacaacaaatactcggagggttac
cctggcaagaggtactacggaggggccgaggtagtggatgagatcgagctgctgtgtcag
cgccgggccctggaggcctttgacctggatcctgctcagtggggagtcaatgtccagccc
tactccgggtccccagccaacctggctgcctacacagcccttctgcagcctcacgaccga
ctcatggggctggacttgcccgatgggggccatctcacccacggctacatgtctgatgtc
aagcgagtctcggctacatccatcttcttcgagtctatgccttataagctgaaccccgag
actggcctcattgactatgagcagctggccctcactgctcggctcttcaggccacgactc
atcatagctggtaccagtgcctatgcgcgcctcattgactatgcccgcatgagagaagtg
tgtgacgaggtcaaggcacacctcttggcagacatggcccacatcagtggcctggtggct
gccaaggtgatcccctcacccttcaagcacgcggatattgtcaccacgaccactcacaag
acccttcgaggggccagggccggactcatcttctaccggaagggggtgcgggctgtggac
cccaaaagtggccgagagaccccttacacgttcgaggaccgaatcaactttgctgtgttc
ccatccctgcaggggggcccccacaaccatgccattgctgcagtggctgtggccctgaag
caggcctgcacccccatgttccgggagtactccctgcagattctgaagaacgctcgggcc
atggctgacgccctgctggagcggggctactccctagtgtctggcggcactgacaaccat
ctagtgctggtagacctgcggccaaagggcctggacggagctcgagccgaacgggtgttg
gaacttgtatccatcacggccaacaagaacacctgtcctggagatcgaagtgccatcacc
cctgggggcctgcggctgggggccccagccctgacttctcgagggttccgtgaagatgac
ttccggaaagttgtaggctttatagatgaaggtgtcaacattggcttggaagtgaagagc
aagaccaccaaactccaggatttcaaatctttcctgctcaaagacccagaaacaagtcac
cagctggccgaccttaggcaacgggtggagcagttcgccagggccttcgccatgcctggc
tttgatgatcactga
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