Odocoileus virginianus (white-tailed deer): 110129773
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Entry
110129773 CDS
T10722
Symbol
VIM
Name
(RefSeq) vimentin
KO
K07606
vimentin
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr04820
Cytoskeleton in muscle cells
ovr05169
Epstein-Barr virus infection
ovr05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
110129773 (VIM)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
110129773 (VIM)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
110129773 (VIM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ovr03019
]
110129773 (VIM)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ovr04812
]
110129773 (VIM)
04147 Exosome [BR:
ovr04147
]
110129773 (VIM)
Messenger RNA biogenesis [BR:
ovr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
110129773 (VIM)
Cytoskeleton proteins [BR:
ovr04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
110129773 (VIM)
Exosome [BR:
ovr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
110129773 (VIM)
Exosomal proteins of other cancer cells
110129773 (VIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
TolA_bind_tri
DUF7491
TPR_MLP1_2
RBD-FIP
DUF4515
GeBP-like_DBD
CENP-F_leu_zip
Motif
Other DBs
NCBI-GeneID:
110129773
NCBI-ProteinID:
XP_020736996
UniProt:
A0A6J0WJD8
LinkDB
All DBs
Position
9:28943208..28951151
Genome browser
AA seq
466 aa
AA seq
DB search
MSTRSVSSSSYRRMFGGPGTASRPSSTRSYVTTSTRTYSLGSALRPSTSRTLYTSSPGGV
YATRSSAVRLRSGVPGVRLLQDSVDFSLADAINTEFKNTRTNEKVELQELNDRFANYIDK
VRFLEQQNKILLAELEQLKGQGKSRLGDLYEEEMRELRRQVDQLTNDKARVEVERDNLTE
DIMRLREKLQEEMLQREEAESTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHDE
EIQELQAQIQEQHVQIDMDVSKPDLTAALRDVRQQYESVAAKNLQEAEEWYKSKFADLSE
AANRNNDALRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFSVEAANYQD
TIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLPLPNFSS
LNLRETNLDSLPLVDTHSKRTLLIKTVETRDGQVINETSQHHDDLE
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccaggtccgtgtcctcgtcctcctaccgcaggatgttcggcggccccggcacc
gcgagccggccgagctccacccggagctacgtgaccacgtccacccgcacctacagcctg
ggcagcgcgctgcgcccctccaccagccgcaccctctacacctcgtcccccggtggcgtg
tacgccacgcgctcctcggccgtgcgcctgcggagcggcgtgcccggcgtgcggctgctg
caggactcggtggacttctcgttggccgacgccatcaacaccgagttcaagaacacccgc
accaacgagaaggtggagctgcaggagctcaatgaccgcttcgccaactacatcgacaag
gtgcgcttcctggagcagcagaacaagatcctgctggccgagctcgagcagctcaagggc
cagggcaagtcgcgcctgggggacctctacgaggaggagatgcgagagctgcgccggcag
gtggaccagctcaccaacgacaaggcccgcgtcgaggtggagcgcgacaacctgaccgaa
gacatcatgaggcttcgggagaagttgcaggaggagatgcttcagagggaggaagccgag
agcactctgcagtctttcagacaggatgttgacaatgcctctttggcacgtcttgacctg
gagcgtaaagtggaatccttgcaagaagagattgcctttttgaagaaactgcatgacgag
gaaatccaggagcttcaggcccagattcaagaacagcacgtgcagatcgacatggatgtt
tccaagcctgacctcacggctgccctgcgtgatgtccgtcagcagtatgagagcgtggcc
gccaagaaccttcaggaggctgaggaatggtacaagtccaagtttgccgacctctctgaa
gctgctaaccgcaacaatgatgccctgcgccaggccaagcaggagtcgaatgagtaccgt
cggcaggtgcagtctcttacctgtgaggtggatgcgctcaaagggactaacgagtctctg
gaacgccagatgcgtgaaatggaagagaacttctctgtggaagctgctaactaccaagac
actattggccgcctgcaggatgagattcagaacatgaaggaagagatggcccgtcacctg
cgtgaataccaagacctgctgaatgtcaagatggcgctcgacatcgagatcgccacctac
aggaagctgctggaaggagaggagagcaggatttctctgcctcttccaaacttttcttcc
ctgaacctgagggaaaccaatctggattcactccctctggttgacacccattcaaaaagg
acacttctgattaagacggtggaaaccagagatggacaggttatcaacgaaacttcccag
catcacgatgatctggaataa
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