Odocoileus virginianus (white-tailed deer): 110130043
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Entry
110130043 CDS
T10722
Symbol
THOC1
Name
(RefSeq) THO complex subunit 1 isoform X1
KO
K12878
THO complex subunit 1
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr03013
Nucleocytoplasmic transport
ovr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110130043 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
110130043 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ovr03019
]
110130043 (THOC1)
03041 Spliceosome [BR:
ovr03041
]
110130043 (THOC1)
Messenger RNA biogenesis [BR:
ovr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
110130043 (THOC1)
Spliceosome [BR:
ovr03041
]
Complex C
Other components
EJC/TREX
110130043 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
110130043 (THOC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
bDLD3
Motif
Other DBs
NCBI-GeneID:
110130043
NCBI-ProteinID:
XP_020737424
UniProt:
A0A6J0WMY4
LinkDB
All DBs
Position
22:22827719..22864161
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AA seq
657 aa
AA seq
DB search
MSPTPPLFSLPEARTRFTKSTREALNNKNIKPLLNTFSQLPGSENEKKCTLDQAFRGVLE
EEIINHSSCENVLAIISLAIGGVTEGICTASTPFVLLGDVLDCLPLDQCDTIFTFVERNV
ATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ
FNLENVTVFNTNEQESTLGQKHTEDREEGMDVEEGEMGDDEAPTTCSIPIDYNLYRKFWS
LQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEELKTGGEHVYFAK
FLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSV
YQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERTSDAKPTRAVRKRAAPE
DFLGKGPSKKILMGNDELTRLWNLCPDNMEACKSETREYMPTLEEFFEEAIEQADPENMV
ESEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEI
KTGEDEDEEDNDALLKENESPDVRRDKPVTGDQIEVFANKLGEQWKVLAPYLEMKDSEIR
QIECDSEDMKMRARQLLVAWQDQEGAHATPENLINALNKSGLSDLAESLTNDNETNS
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgacgccgccgctcttcagtttgcccgaagcgcggacgcggtttacgaaatct
acgagagaggccctgaacaacaaaaatatcaagcccttgttgaatacctttagccagtta
cctggcagtgaaaatgaaaaaaaatgtacccttgaccaggcttttagaggtgttctagaa
gaagaaattataaatcattcatcatgtgaaaacgttttagctattatttctcttgctatt
gggggagtaactgaaggtatttgtacggcatctacaccttttgtattgttgggagatgtt
ttggactgtcttcctttggatcagtgtgacacaatattcacttttgtggaaagaaatgtt
gctacttggaaatcgaatacattctattctgctgggaaaaattatttactacgtatgtgc
aatgatctcctacgaagattatcaaaatcccagaatacagtcttctgtggacgaattcag
ctctttttggccaggcttttccctttatctgagaaatcaggtcttaacttgcagagtcag
tttaatctggaaaatgtcactgttttcaataccaatgagcaggagagcacactgggtcag
aagcacacagaggacagagaagaaggaatggatgtagaagaaggtgaaatgggagatgat
gaagctccaacaacttgctccattccaattgattacaacctgtaccgaaaattttggtca
cttcaggattactttaggaaccctgtgcaatgctatgagaaaatctcatggaaaactttt
ctcaagtattctgaagaagtcctagctgtttttaagagttataaattagatgatactcag
gcctcaaggaaaaagatggaagaattgaaaacaggaggagagcatgtatattttgcaaaa
tttttaacaagtgaaaagttgatggatttacagctgagtgacagtaacttccgtcgacac
atcttgttgcagtatctcattttatttcagtatctcaaggggcaggtcaaattcaaaagt
tcaaactatgttttaactgatgagcaatcactctggattgaagatactacaaaatcagtt
tatcaactactatctgaaaacccccctgatggagaaagattttcaaagatggtagagcat
atattaaacactgaagaaaactggaactcatggaaaaatgaaggctgcccaagttttgtg
aaagagagaacatcagacgccaagcccacaagagcagtgcggaaaagagcagcgccggaa
gacttcctggggaaagggcccagcaagaaaattctgatgggaaatgatgagttaacaagg
ctttggaatctctgtcctgacaacatggaagcctgtaaatcagagacaagggaatacatg
ccaactttggaggaattcttcgaagaagccattgaacaggccgaccctgaaaacatggtt
gaaagtgaatacaaggctgtgaacaactcaaattatggttggagagccctaagactgtta
gcacgcagaagccctcacttcttccagccaaccaaccagcagtttaaaagtttgccagaa
tatctcgaaaacatggtaataaagctagccaaggaattaccacctccttctgaagaaata
aaaacaggtgaggatgaagatgaggaagataatgatgctttactcaaagaaaatgaaagt
cctgatgttcggcgagacaaacctgtaacaggggaccaaatagaggtctttgccaacaaa
ctgggtgaacagtggaaggtcctggctccttacttggaaatgaaggactcggaaattaga
cagatcgagtgtgacagcgaagacatgaagatgagagccaggcagctgctcgtggcctgg
caagaccaggagggggcacacgccacgcccgagaacctgatcaacgcgctcaacaagtct
gggctaagtgaccttgcagaaagtctaactaatgacaatgagacaaacagttag
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