Odocoileus virginianus (white-tailed deer): 110130065
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Entry
110130065 CDS
T10722
Symbol
ATG13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr04136
Autophagy - other
ovr04140
Autophagy - animal
ovr04211
Longevity regulating pathway
ovr05010
Alzheimer disease
ovr05014
Amyotrophic lateral sclerosis
ovr05016
Huntington disease
ovr05017
Spinocerebellar ataxia
ovr05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110130065 (ATG13)
04136 Autophagy - other
110130065 (ATG13)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
110130065 (ATG13)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
110130065 (ATG13)
05014 Amyotrophic lateral sclerosis
110130065 (ATG13)
05016 Huntington disease
110130065 (ATG13)
05017 Spinocerebellar ataxia
110130065 (ATG13)
05022 Pathways of neurodegeneration - multiple diseases
110130065 (ATG13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ovr04131
]
110130065 (ATG13)
03029 Mitochondrial biogenesis [BR:
ovr03029
]
110130065 (ATG13)
Membrane trafficking [BR:
ovr04131
]
Autophagy
Autophagosome formation proteins
ULK complex
110130065 (ATG13)
Atg1 complex
110130065 (ATG13)
Mitochondrial biogenesis [BR:
ovr03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
110130065 (ATG13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
110130065
NCBI-ProteinID:
XP_020737456
UniProt:
A0A6J0WIA9
LinkDB
All DBs
Position
10:complement(13038770..13084335)
Genome browser
AA seq
550 aa
AA seq
DB search
METDLNSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYAVYNR
LSLLLKSLLAVTRVTPAYRLSRKQGHEYVILYRIYFGDVQLNGLGEGFQTVRVGTVGTPV
GTITLSCAYRINLAFMSTRHFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRTAGEDTGV
AYPSVEDSQEVCTTSFSTSPPSQCVFTVTKALFQTPTPVVTDTLRVPTAGLAFSHQLSSS
RLSYQPAALGVGSADLAYPVVFAAGLNATHPHQLMVPGKEGGVPLGPNQPAHGAQADQER
LATYTPSDGAHCAATPSSSEDTETVSNSSEGRASPHDVLETIFVRKVGAFVNKPINQVTL
TSLDIPFAMFAPKNLELEDADPMVNPPDSPETTSPLQGSLHSDGSSGGSSGHTQDDFVMI
DFKPAFSKDDILPMDLGTFYREFQNPPQLSSLSIDIGAQSMAEDLDSLPEKLAAHEKNVR
EFDAFVETLQ
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgatcttaattcccaggacagaaaggacctggacaagttcattaagtttttt
gccctcaagactgtccaagtgattgtccaggctcgactgggagagaagatttgtactcgt
tcatcttcttccccaacgggttcagactggttcaatttagcgatcaaagacatcccagag
gttacacatgaggcaaagaaggccctggcagggcagctgcctgctgttgggaggtccatg
tgtgtggagatctcactcaagacttctgagggagattccatggagctagaaatctggtgt
ctggaaatgaatgaaaagtgtgataaagaaatcaaagtttcctatgccgtgtacaacaga
ttgtcattgctgctgaagtctctgcttgctgtaactagggtgactccagcataccgactc
tccagaaagcaagggcatgaatatgtcatcttatacaggatatattttggggacgtccag
ctgaatggcttaggggaaggtttccagacagttcgtgttgggacagtgggtacacctgtg
ggcaccatcactctttcctgtgcttacagaattaacttggcattcatgtccaccaggcac
tttgagaggaccccacctatcatgggcattattattgatcactttgtggaccgtccctat
cccagctcctcgcccatgcacccctgcaattacagaactgccggtgaggacactggagta
gcgtatccttctgtggaagattctcaagaagtgtgcaccacctccttttccacctcgcct
ccctcccagtgtgtgtttactgtcacaaaggcactttttcagacccctactcctgtggtg
acggacactctgagggtccccacggcaggactggccttttcccatcaactctccagctct
cgcctttcctatcagcctgctgccctgggcgttggatctgctgacctggcttatccagta
gtgtttgctgctggcttaaatgccacacaccctcaccagctaatggtccccgggaaggaa
ggtggggtaccccttggtcccaaccagcctgcccacggtgcccaggctgaccaggagaga
ctggcaacctacaccccttctgatggggcccactgcgccgccacgccatccagcagcgag
gacactgaaactgtgtcaaacagcagcgagggacgggcctccccccacgacgtcttggag
accatctttgtccggaaagtgggggcttttgtcaacaagcccatcaaccaggtgactctg
accagtttggacataccctttgccatgtttgctcccaagaacctggagctggaggatgcg
gatcccatggtgaatccgccagattccccagagactacgtctcctctccagggcagcctg
cactctgacggctccagcgggggcagcagcggccatacccaggacgacttcgtcatgatt
gacttcaaaccagctttttctaaagacgacattcttccgatggacttggggaccttctat
cgtgaatttcagaacccccctcagctgagcagcctctccatcgatatcggggcccagtcc
atggccgaggacttggactcactaccagagaagctggctgcgcatgagaagaatgtccga
gaatttgatgcctttgtagaaaccctgcagtaa
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integrated database retrieval system
