KEGG   Odocoileus virginianus (white-tailed deer): 110130261
Entry
110130261         CDS       T10722                                 
Symbol
TRIM42
Name
(RefSeq) tripartite motif-containing protein 42 isoform X1
  KO
K12018  tripartite motif-containing protein 42
Organism
ovr  Odocoileus virginianus (white-tailed deer)
Brite
KEGG Orthology (KO) [BR:ovr00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ovr01009]
    110130261 (TRIM42)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ovr04121]
    110130261 (TRIM42)
Protein phosphatases and associated proteins [BR:ovr01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     110130261 (TRIM42)
Ubiquitin system [BR:ovr04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    110130261 (TRIM42)
SSDB
Motif
Pfam: zf-B_box fn3 Pur_ac_phosph_N TRIM_CC Fn3_VIN3 FN3_DSCAM-DSCAML_C CHDCT2
Other DBs
NCBI-GeneID: 110130261
NCBI-ProteinID: XP_020737734
UniProt: A0A6J0WNT0
LinkDB
Position
4:complement(66672772..66699268)
AA seq 724 aa
MDTAMCVCSPCCTWQRCCPRLCSCLCCKFLFTSERNCTCFPCPYKDERNCQCCHCTCSEN
PNCHWCCCSWANDPNCKCCCTASSNLKCYYYESRCCRNATITFRKGRLRSIRTSSKTALR
IGSSDTQVEEVKMPTANSNLVSHLSCPICGRLRLHSFMLPCHHSLCEKCLRRLQKHAEVT
ENFFILICPVCNRSHCMPYSHKMQLPENYLRGRLTKRYMQEHGYLKWRFDRSSGPIVCQV
CRSQRVAYKRCLTCRLNLCNECLKTFHSDVAMQDHVFVDTSTEDQDEKICIHHPSSRIIE
YCRNDDELLCGFCKTSLHNGHDTISLIDACSERAAALFSAIAKFKAVRYEIDNDLMEFNI
LKNSFKADKEVKRKEIRNGFLKLRSILQEKEKTIMEQIENLEVSRQKEIEKYVYVTTMKV
NEMDGLIAYSKEALKETGQVAFLQSAKILVEQIEDGIQSTYRPDPQLRLHSLNCMPLDFV
ELSSAIHELFPTGPKKVCSSGDSLPSPYPLHSEMMIARKVTFSTHSFDNQQIYQRSSSLL
SFNASACEKTKIGLEAYGRTQSAAPAKPTDGLYTYWSAGVENQPVQNSNSFHNWYSFNDS
SVQTPGPIIIYQTLVYPRAAKVYWTCPTENVDSFEMEFYELISSPPNNVRTELCGQIRDI
MQQNLELHNLTPNTEYLFKVRAINDNGPGQWSDICKVVTPDGRGKNRAKWGLLKNIQTAL
QKRF
NT seq 2175 nt   +upstreamnt  +downstreamnt
atggatactgctatgtgtgtttgctctccatgttgtacgtggcagaggtgctgtccgcgg
ctgtgctcctgcctgtgctgcaagttcctcttcacctcggagcggaactgcacctgcttc
ccctgcccttacaaagatgagcgcaactgccagtgctgccactgcacctgctccgagaac
cccaactgccactggtgctgctgctcctgggccaatgaccccaactgcaagtgctgctgc
acggccagcagcaacctcaagtgctactactacgagagtcgctgctgccgcaatgccacc
atcaccttccgcaagggccgcctccggagcatccgcacctcctccaagacggcgctgcgc
attgggagcagcgacacgcaggtggaggaggtaaagatgccgacggccaacagcaatctg
gtcagccacctgtcgtgccccatctgcggccgcctgcgcctgcactccttcatgctgccc
tgccaccacagcctgtgtgagaagtgcctgcggcggctgcagaagcacgccgaggtcacc
gagaacttcttcatcctcatctgcccggtgtgcaaccgctcgcactgcatgccctacagc
cacaagatgcagctgcccgagaactacctgcgcggccgcctcaccaagcgctacatgcag
gagcacggctacctcaagtggcgcttcgaccgctccagcgggcccatcgtctgccaggtc
tgccgcagccagcgcgtcgcctacaagcgttgcctcacctgccgcctcaacctgtgcaac
gagtgcctcaagactttccactcggacgtggccatgcaggaccacgtgtttgtggatacc
agcacggaggaccaggatgagaagatctgcatccaccacccgtccagccgcatcatagag
tactgccgcaacgacgacgagctgctctgcggcttctgtaagacctccctccacaacggc
cacgacaccatcagcctcatcgacgcctgctcagagagggctgccgcgctcttcagcgcc
atcgccaagttcaaagcagtccgctatgaaattgataatgacctcatggaattcaatatt
ttaaaaaacagctttaaagctgacaaggaggtaaagcgaaaagagatcagaaatggattt
ctcaagctgcgcagcattctccaggagaaagagaaaaccatcatggagcagatagagaat
ctggaggtgtccaggcagaaggagattgaaaagtatgtgtatgtcactaccatgaaggtg
aacgaaatggatggcctgattgcctactccaaggaggcactgaaggagacaggccaagtg
gcattcctgcagtcagccaagatcctggtggaacagatagaggatggcatccagagcact
tacaggcctgacccacagctccggctacactccttgaactgcatgcccttggacttcgtt
gagctctctagtgccattcacgagctcttccccacaggacccaagaaggtatgttcctcc
ggggactccctgccatccccctaccccctgcactcagaaatgatgatcgccaggaaggtc
actttcagcacccacagcttcgacaaccagcagatataccagcgaagctcctctttattg
tccttcaatgcctctgcctgtgagaagaccaagataggtctggaggcctatgggcgaacc
cagtcagctgcacctgccaagcccacagatggcctctacacgtactggagtgcaggggta
gaaaaccagcctgtgcagaatagcaatagcttccacaactggtactcattcaacgatagc
tctgtgcaaactccaggcccaattattatctaccagactctggtgtatccaagagctgcc
aaggtttactggacatgcccaacagaaaacgtggactcttttgagatggaattctacgaa
ctcatttcttcccctcctaacaatgtgcggacagagctctgtggacaaattcgggacata
atgcagcagaatctggagctacacaacctgacccccaacaccgagtatctgtttaaagtg
cgagccatcaatgataatggtcccgggcaatggagtgacatttgcaaggtggtaacacca
gacgggcgtgggaagaaccgagctaagtggggcctgctgaagaatatccagactgccctc
cagaaacgcttctga

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