Odocoileus virginianus (white-tailed deer): 110130320
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Entry
110130320 CDS
T10722
Symbol
SOX5
Name
(RefSeq) transcription factor SOX-5 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
ovr Odocoileus virginianus (white-tailed deer)
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ovr03000
]
110130320 (SOX5)
Transcription factors [BR:
ovr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
110130320 (SOX5)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
LOH1CR12
DGT4
Motif
Other DBs
NCBI-GeneID:
110130320
NCBI-ProteinID:
XP_070309872
UniProt:
A0ABM4H2S7
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Position
23:complement(28323004..29413004)
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AA seq
764 aa
AA seq
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MLTDPDLPQEFERMSSKRPASPYGEADGEVAMVTSRQKVEEEESDGLPAFHLPLHVSFPN
KPHSEEFQPVSLLTQETCGHRTPTSQHNTMEVDGNKVMSSFAPHNSSTSPQKAEEGGRQS
GESLSSATLGTPERRKGSLADVVDTLKQRKMEELIKNEPEETPSIEKLLSKDWKDKLLAM
GSGNFGEIKGTPESLAEKERQLMGMINQLTSLREQLLAAHDEQKKLAASQIEKQRQQMEL
AKQQQEQIARQQQQLLQQQHKINLLQQQIQQVQGQLPPLMIPVFPPDQRTLAAAAQQGFL
LPPGFSYKAGCSDPYPVQLIPTTMAAAAAATPGLGPLQLQQLYAAQLAAMQVSPGGKLPG
VSQGNLGAAVSPTSIHTDKSTNSPPPKSKDEVAQPLNLSAKPKTSDGKSPTSPTSPHMPA
LRINSGAGPLKASVPASLASPSARVSTMGYLNDHDAVTKAIQEARQMKEQLRREQQVLDG
KVAVVNSLGLNNCRTEKEKTTLESLTQQLAVKQNEEGKFSHAMMDFNMSGDSDGSAGVSE
SRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTN
LEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEMRQY
FNVGQQAQIPIATAGVVYPGAIAMAGMPSPHLPSEHSSVSSSPEPGMPVIQSTYDVKGEE
PHIKEEIQAEDINGEIYDEYDEEEDDPDVDYGSDSENHIAGQAN
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgcttactgaccctgatttacctcaggagtttgaaaggatgtcttccaagcgaccagcc
tctccgtatggggaagcagatggagaggtagccatggtgacaagcagacagaaagtggaa
gaagaggagagtgacgggctccccgcctttcaccttcccttgcatgtgagttttcccaac
aagcctcactctgaggaatttcagccagtttctctgctgacgcaagagacttgtggccat
aggactcccacttctcagcacaatacaatggaagttgatggcaataaagttatgtcttca
tttgccccacacaactcatctacctcacctcagaaggcagaagaaggtgggcggcagagt
ggcgagtccttgtctagtgcaaccctgggaactcctgaaagacgcaaaggcagcttagct
gatgttgttgacaccttgaaacagaggaaaatggaagagctcatcaaaaatgagccagaa
gaaacccccagtattgaaaaactactctcaaaggactggaaagacaagcttcttgcaatg
ggatcagggaactttggtgaaataaaagggactcccgaaagcctagctgagaaggagagg
cagctcatgggtatgatcaatcagctaaccagtctgcgagagcagctgctggctgcccat
gatgagcagaagaaactggctgcgtctcagattgagaaacagcgccagcaaatggagctg
gccaagcagcagcaagaacagatcgcgagacaacagcagcagcttctgcagcagcaacac
aaaatcaatttgcttcagcagcagatccagcaggttcaaggtcaactgccgccattaatg
attcccgtattccctcctgatcaacggacactggctgcagctgcccagcaaggattcctc
cttcctccaggcttcagctataaggctggatgtagtgacccttaccccgtacagctgatc
ccaactaccatggcagctgctgccgcagcaacaccaggcttaggcccactccaactgcag
cagttatatgctgcccagctagctgcaatgcaggtatctccaggaggaaagctcccaggc
gtatcccaaggcaacctcggtgctgctgtatctcctaccagcattcacacagacaagagc
acaaacagcccaccacccaaaagcaaggatgaagtggcacagccactgaacctatcagct
aaacccaagacctctgatggcaaatcacccacatcacccacctctccccatatgccagct
ctgagaataaacagtggggcaggccccctcaaagcctctgtcccagcatcattagctagt
ccttccgccagagttagcacaatgggttatttaaatgaccatgatgctgtcaccaaggca
atccaagaagctcggcagatgaaggagcagctccggcgggaacagcaggtgcttgatggg
aaggtggctgttgtgaatagtctaggtctcaataactgccggacagaaaaggaaaaaaca
acactggagagtctgactcagcaactggcagttaaacagaatgaagaaggaaaatttagc
catgccatgatggatttcaatatgagtggagattctgatggaagtgctggagtctcagaa
tcaagaatttatagagaatccagggggcgtggtagcaatgaaccccacataaagcgtcca
atgaatgccttcatggtgtgggctaaagatgaacgaaggaaaatccttcaagcttttcct
gacatgcacaactccaacatcagcaagatactgggatctcgctggaaagctatgacaaac
ctagagaaacagccatactacgaggagcaagcccgtctcagcaagcagcacctggagaag
taccctgactacaagtacaagcccaggccaaagcgcacctgcctagtggatggcaaaaag
ctgcgcattggggaatacaaggcaatcatgcgaaaccggcggcaggaaatgcggcagtac
ttcaatgttgggcaacaagcacagatccccatcgccacggctggcgtcgtgtaccctggg
gccatcgccatggctgggatgccctcccctcacctgccctcagagcactccagcgtgtcc
agcagcccggagcccggcatgcctgttatccagagcacttatgatgtgaaaggagaggag
ccacacatcaaagaagagatccaggctgaggacatcaacggagaaatttatgacgagtac
gacgaggaagaggatgatccggatgtagattatgggagtgacagtgaaaaccatattgcc
ggacaagccaactga
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