Odocoileus virginianus (white-tailed deer): 110130601
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Entry
110130601 CDS
T10722
Symbol
LAMB1
Name
(RefSeq) laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr04151
PI3K-Akt signaling pathway
ovr04510
Focal adhesion
ovr04512
ECM-receptor interaction
ovr05145
Toxoplasmosis
ovr05146
Amoebiasis
ovr05165
Human papillomavirus infection
ovr05200
Pathways in cancer
ovr05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
110130601 (LAMB1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110130601 (LAMB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110130601 (LAMB1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
110130601 (LAMB1)
09162 Cancer: specific types
05222 Small cell lung cancer
110130601 (LAMB1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
110130601 (LAMB1)
09174 Infectious disease: parasitic
05146 Amoebiasis
110130601 (LAMB1)
05145 Toxoplasmosis
110130601 (LAMB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
CorA
F5_F8_type_C
BNR_6
ATG17_like
Motif
Other DBs
NCBI-GeneID:
110130601
NCBI-ProteinID:
XP_070325163
UniProt:
A0ABM4IBG9
LinkDB
All DBs
Position
1:66364589..66440458
Genome browser
AA seq
1786 aa
AA seq
DB search
MGRLQVFAFSFLALCGVGVSAQEPDFSYGCAEGSCYPATGDLLIGRAQKLSVTSTCGLHK
PEPYCIVSHLQEDKKCFICNSQDPYHETLNPDSHLIENVVTTFAPNRLKIWWQSENGVEN
VTIQLDLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGKTWGVYRYFAYDCESSFPGISTG
PMKKVDDIICDSRYSDIEPSTEGEVIFRALDPAFRIEDPYSPRIQNLLKITNLRIKFVKL
HTLGDNLLDSRMEIREKYYYAVYDMVVRGNCFCYGHASECAPVDGVNEEVEGMVHGHCMC
RHNTKGLNCEQCMDFYHDLPWRPAEGRNSNACKKCNCNEHSSSCHFDMAVYLATGNISGG
VCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPSLCEQCTCDPAGSQNGGICDSYTDFSAG
LIAGQCRCKLYVEGEHCDICKEGFYGLSAEDPFGCKSCACNPLGTIPGGNPCDSETGYCY
CKRLVTGQHCDQCLPEHWGLSNDLDGCRPCDCDVGGALNNSCSAESGQCLCRPHMIGRQC
SEVESGYYFTTLDHYIYEAEEANFGPGVSIVERQYIQDRIPSWTGAGFVRVPEGAYLEFF
IDNIPYSMEYDILIRYEPQLPDHWEKAVITVQRPGKIPSSSRCGNTVPDDDNQVVSLSPG
SRYVVLPRPVCFEKGVNYTVRLELPQYTSSDSAVDSPYTLIDSLVLMPFCKSLDIFTVGS
SGDGVVTNSAWETFQRYRCLENSRSVVKTPMTDVCRNIIFSISALLHQTGLACECDPQGS
LSSVCDPNGGQCQCRPNVVGRRCDRCAPGTFGFGPNGCKPCECHLQGSVNAFCDPITGQC
HCFQGVYTRQCDRCLPGFWGFPSCQPCQCNGHADDCDSVTGECLSCQDFTTGHNCERCLA
GYYGDPIIGSGDHCRPCPCPDGPESRRQFASSCYQDPVTLQLACVCNPGYIGSRCDECAS
GFFGNPSDVGGTCQPCQCHHNIDTADPEACDKETGRCLKCLYHTEGEHCQLCRFGYYGDA
LRQDCRKCVCNYLGTVQERCNGSDCQCDKATGQCFCLPNVIGQNCDRCAPNTWQLASGTG
CAPCSCDAAHAFGPSCNEFTGQCHCMPGFGGRSCSECQELFWGDPSVECRACDCDPRGIE
TPQCDQSTGQCVCVEGVEGPRCDRCTRGYSGVFPDCAPCHQCFALWDVIIAELTNRTQKF
LEKAKALKISGVIGPYRETVDSVEKKVNEIRDILAHSPAAEPLKNIGNLFEEAEKLTKDV
TEKMARVEVDLSDTAMQNNITARQLDALQAEAESLDNTVKELAEQLEFIKNSDIRGALDS
ITKYFQMSLEAEEHVNASTTNANGTVEQSALTRERVEDLMLEQESQFREKQEEQARLLDE
LAGKLQSLDLSAAAKMTCGTPPGASCSESECGGPNCRTDEGEKKCGGPGCGGLLTVAHSA
WQKAMDFDRDVLSALAEVEQLSKMVSEAKLRADEAKQNAQDVLLKTNATKEKVDRSNEDL
RNLIKQIRNFLTQDSADLDSIEAVANEVLKMEMPSTPQQLQNLTEDIRERVESLSQVEVI
LQQSAADIARAEMLLEEAQKASKSATDVKVTADMVREALEEAEKAQVAAEKAIKQADEDI
QGTQNLLTSIESETAASEETLFNASQRISELERNVEELKRKAAQNSGEAEYIEKVVYTVK
QSAEDVKKTLDNELDEKYKKVENLIAKKTEESADARRKAEMLQNEAKTLLAQANSKLQLL
KDLERKYEDNQKYLEDKAQELVRLEGEVRSLLKDISQKVAVYSTCL
NT seq
5361 nt
NT seq
+upstream
nt +downstream
nt
atggggcggctccaggtgttcgcgttcagtttcttagccctgtgcggagtcggagtgagc
gctcaagaacccgatttcagctacggctgcgcggaggggagctgctacccggccacaggc
gaccttctcatcggccgagcgcagaagctctcggtgacctcgacctgcgggctgcacaaa
cccgagccttactgtatcgtcagccacctccaggaggacaaaaaatgcttcatatgcaat
tcacaagatccttatcatgaaaccctcaaccctgacagtcatctcattgaaaatgtggtc
acgacatttgctccaaaccgccttaagatctggtggcagtccgaaaatggcgtggagaat
gtcactatccaactggatttggaagcagagtttcatttcactcatctcatcatgaccttc
aagacattccgtccagctgctatgctgatagaacggtcgtccgactttggaaaaacctgg
ggtgtatacagatactttgcctatgactgtgagagctcatttccaggcatttccaccggc
cccatgaagaaagtcgacgatataatttgtgattcccgatattctgacattgagccctca
acggaaggagaggtgatatttcgtgctttagatcctgctttcagaatagaagatccttac
agtccaaggatacagaatctcttaaaaattaccaacttgaggatcaagtttgtgaaacta
catactttgggagataaccttttggattccagaatggaaatcagagaaaagtattattac
gcagtttacgatatggtggttcgaggaaactgcttctgctatggccacgccagcgagtgt
gccccagtggacggagttaatgaagaggtagagggaatggttcacggacactgcatgtgc
cggcataacaccaagggcttaaactgtgaacagtgcatggatttctaccatgatttacct
tggagacccgctgaaggtcgaaacagcaatgcctgtaaaaagtgtaactgcaacgaacat
tccagctcatgccacttcgacatggcagtctacttggccactggcaacatcagcggaggg
gtatgtgatgactgtcagcacaacacaatggggcgcaactgtgagcagtgcaaaccgttt
tactaccagcacccagagagagacatccgagatcctagcctctgtgaacaatgtacatgt
gacccagctggttctcagaacgggggaatctgtgacagctacacggacttttctgccggt
ctcattgctgggcagtgtcggtgtaaattatacgtggaaggagaacattgtgatatctgc
aaagaaggcttctatggtttaagcgctgaagatccatttggttgtaaatcttgtgcttgc
aatcctctgggaacgattcctggcgggaacccttgtgattctgagactggttactgctac
tgtaagcgtctggtgacaggacagcattgtgaccagtgtctgcccgagcactggggctta
agcaacgacttggatggatgtcgaccttgcgactgtgacgttgggggagccttaaacaat
agttgctctgcagagtcgggccagtgcctgtgccgaccccacatgatcggacgtcagtgc
agcgaagtggaatctggctactacttcaccaccttggatcactacatctacgaagcagaa
gaagccaactttgggcctggggtcagcatagtggaacggcagtatatccaggaccggatt
ccttcctggactggagcgggctttgtccgagtgcctgaaggggcttacttagagttcttc
atcgacaacataccatattctatggagtatgacatcctaattcgctatgaaccacagctc
cctgaccactgggagaaagctgtcatcacagtgcagcggcccggcaagattccaagcagc
agccggtgtggaaacactgttcccgatgatgacaaccaggtggtgtccctgtcacctggc
tccaggtacgtggtcctcccccgtcccgtgtgcttcgagaagggtgtgaactacacagtg
cggttagaactgccccagtacacctcctcggacagcgctgtggacagcccttacaccctg
attgattcccttgttctcatgccattctgtaagtcactggacatcttcaccgtgggaagc
tcaggagatggggtggtcaccaacagcgcctgggaaacctttcagagataccgatgtctg
gagaatagcaggagcgttgtgaagacgccaatgactgatgtttgcagaaatatcatcttt
agcatttctgccctgttgcaccagacaggcctggcttgtgagtgcgaccctcagggctcc
ttaagttccgtctgtgaccccaatggaggccaatgtcagtgccggccaaacgtggtggga
agaaggtgtgacagatgtgctcctggcacctttggctttgggcccaacggatgcaaacct
tgtgagtgccatctgcaaggatctgtcaatgctttctgcgaccccatcactggccagtgc
cactgcttccagggggtgtacacaaggcagtgtgaccgctgcttgcccgggttctggggc
tttccaagctgccagccctgccagtgcaatggccacgccgatgactgcgactcagtgaca
ggggagtgcttgagctgccaggacttcaccacagggcataactgtgagaggtgcttggct
ggttactatggagaccccatcatcgggtcaggagaccactgccgcccttgtccttgccca
gatggtcccgagagcagacgccagtttgccagtagctgctatcaagaccctgttacttta
cagcttgcgtgtgtctgtaaccctggatacattggctccagatgtgacgagtgtgcctca
ggcttctttggcaatccctcagatgtgggggggacatgtcagccttgccagtgtcaccac
aacatcgacacagcggacccggaagcctgcgacaaggagaccgggaggtgcctcaagtgc
ctgtaccacacggagggggagcactgccagctctgccgctttggatactatggcgacgcg
ctccgccaggactgtcgcaagtgtgtctgcaattacctgggcacggtgcaggagcgctgt
aacggctcggactgccagtgcgacaaggccacggggcagtgcttctgcctccccaacgtg
atcggccagaactgtgaccgctgtgcgcccaacacctggcagctggccagcgggacaggg
tgcgccccctgcagctgcgatgctgcccatgccttcgggccgtcctgtaatgagttcaca
gggcagtgccactgcatgcctggcttcggaggccgctcttgcagcgagtgccaggagctc
ttctggggggaccccagcgtggagtgccgagcctgtgactgcgaccccaggggcatcgag
acaccgcagtgtgaccagtccactggccagtgtgtgtgtgtggagggtgtggagggtcca
cgctgtgacaggtgcacccggggctactcgggtgtcttccccgactgcgcaccctgccac
cagtgctttgctctctgggacgtgatcatcgctgagttgaccaacaggacccagaagttc
ctggagaaagccaaggccttgaagatcagtggtgtgattgggccttaccgggagactgtg
gactcagtggagaaaaaagtcaacgagatcagagacatcctggcccacagcccagctgcc
gaaccactgaagaacattgggaatctctttgaggaagcagagaaactaactaaagatgtc
acagaaaagatggcacgagtagaagtggatctgtctgacacagctatgcaaaataacatc
acagccagacaattagatgctttacaggcagaagcagaaagtctagataacacagtgaaa
gagcttgctgaacagttggaatttatcaaaaattcagatattcggggcgccttggacagc
attaccaagtatttccagatgtctctagaggccgaggaacatgtgaatgcttccaccaca
aatgccaacggcacggtggagcagtcggccctcactagagagagggtggaagatttgatg
ttggagcaagagtcgcagttcagagagaaacaggaggagcaggcccgacttctggatgag
ctggcaggcaaactacagagtcttgacctttcagctgccgccaaaatgacgtgtggaacg
cctccgggggcctcctgttccgagtctgaatgtggcggcccaaactgcagaaccgacgaa
ggagaaaagaagtgtggcgggcctggctgtggtgggctgctcaccgttgcacacagcgcc
tggcagaaagccatggactttgaccgagatgtcctgagtgccctggctgaggtggaacag
ctctccaagatggtctctgaagcaaaactgagggctgatgaagcaaaacagaatgctcaa
gatgttctgttgaaaaccaatgctaccaaagaaaaagtggacaggagcaatgaggatctg
agaaatctgatcaagcaaatcaggaactttttgacccaagatagtgctgatttagacagc
atcgaagcagttgctaacgaagtcttgaagatggaaatgcctagcactccacagcagtta
cagaacttgacagaagatatccgtgaacgagttgaaagcctttctcaagtagaggttatt
ctacagcaaagtgcagctgacattgccagagctgagatgttgttagaagaagctcaaaaa
gccagcaaaagtgcaacagatgttaaagtcactgcagacatggtaagggaagccctggaa
gaagcagaaaaggcccaggttgcagcagagaaggcaattaaacaagcagacgaagacatc
cagggaacccagaacctgctcacctcgatagagtctgaaacagcagcttctgaggaaact
ctgttcaatgcctcccagcgcatcagcgagctagagaggaatgtggaagaacttaagcgg
aaagctgcccagaattctggggaggcagaatatattgagaaagtagtgtacactgtgaag
caaagtgcagaagatgttaagaagactctggacaatgaacttgatgaaaagtacaagaaa
gtagaaaatttaattgccaagaaaaccgaagagtcagcagatgccagaaggaaagcagaa
atgctacaaaatgaagcaaaaacacttttggctcaagcaaacagcaaactgcaactcctg
aaagatttagaaagaaaatatgaggacaatcaaaaatatttagaagataaagctcaagaa
ttagtaagactggaaggagaagttcgttcactcctaaaggatataagccagaaagttgct
gtctatagtacctgcttgtaa
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