Odocoileus virginianus (white-tailed deer): 110130723
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Entry
110130723 CDS
T10722
Symbol
COP1
Name
(RefSeq) E3 ubiquitin-protein ligase COP1 isoform X4
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr04115
p53 signaling pathway
ovr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110130723 (COP1)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
110130723 (COP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ovr04121
]
110130723 (COP1)
Enzymes [BR:
ovr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110130723 (COP1)
Ubiquitin system [BR:
ovr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110130723 (COP1)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
110130723 (COP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
zf-C3HC4_2
Beta-prop_EIPR1
WDR55
Beta-prop_RIG_2nd
EIF3I
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
zf-C3HC4
zf-RING_2
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
zf-RING_UBOX
Beta-prop_EML
zf-C3HC4_3
Beta-prop_DCAF4
zf-RING_5
zf-C3HC4_4
Beta-prop_WDR90_POC16_2nd
RING_XB3-XBAT31
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
WD40_like
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_IFT122_1st
zf-rbx1
zf-RING_10
zf_C2H2_10
zf-RING_11
Sina_RING
Motif
Other DBs
NCBI-GeneID:
110130723
NCBI-ProteinID:
XP_020738556
UniProt:
A0A6J0WP32
LinkDB
All DBs
Position
11:22382306..22595528
Genome browser
AA seq
735 aa
AA seq
DB search
MSGSRQAGSGSAGTSPGSSAASSVTSASSSLSSSPSPPSVAASAAALGSGGAAQAAGSGG
LGGPARPVLVAAAVSGSGGGSGGGAVSAGLSRLSCAARPSAGVGGSSSSLSSGSRKRPLL
APLCNGLINSYEDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYV
VDNIDHLYPNFLVNELILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLA
NVNLMLELLVQKKKQLEAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRV
EEMSGLYSPVSEDSTVPQFEAPSPSHSSIIDSTEYSQPPGFSGSSQTKKQPWYNSTLASR
RKRLTAHFEDLEQCYFSTRMSRISDDSRTSSQLDEFQECLSKFTRYNSVRPLATLSYASD
LYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCI
SWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDA
KVKLWSTNLDNSVASIEAKANVCCVKFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFK
GHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNFVGLASNGDYIA
CGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWRALPDGESNVL
IAANSQGTIKVLELV
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgtctgggagccgccaggccggatcgggctccgccggcaccagcccgggctcctccgcg
gcctcctcagtgacttccgcctcctcgtccttatcctcttccccgtcgcccccttccgta
gcggcttcggcggcggcactggggtccggcggggcggcccaggccgcgggctccggcggt
ctcgggggcccggcgcggcctgtgctggtggcggccgcggtgtccggcagcggcggcggg
agtggcggcggggcggtgtccgcgggcctgtcccggctcagctgcgcggccaggcccagc
gccggcgtaggagggagcagctccagcctaagcagcggcagcaggaagcgacctctactc
gcccccctgtgcaacgggctcatcaactcctacgaggacaaaagcaacgacttcgtctgc
cccatctgctttgatatgatcgaggaagcatacatgacgaagtgtggtcacagcttttgc
tacaagtgtattcatcagagtttggaggataataatagatgtcccaagtgtaactatgtt
gtggataatattgaccatctgtatcctaatttcttggtgaatgagctcattctcaaacag
aagcaaagatttgaggaaaagaggttcaaattggaccactcagtgagtagcaccaatggc
cacaggtggcaaatatttcaggatttgttgggaactgaccaagataaccttgatttggcc
aatgtcaacctcatgctggagttactagtgcagaagaagaaacaactggaagcagaatca
catgcagcccaactacagatccttatggaattcctcaaggttgcaagaagaaataagaga
gagcaactggagcagattcagaaggagttaagtgttttggaagaggatatcaaaagagtg
gaagaaatgagcggcttatattctcctgtcagtgaggatagcacagtgcctcaatttgaa
gctccttctccatcacacagtagtattattgattccacagaatacagccaacctccaggt
ttcagtggcagttctcagacaaagaaacagccctggtataacagcacattagcctcaaga
cgaaaaagactcactgctcattttgaagacttagagcaatgttacttttctacaaggatg
tctcgtatctcagatgacagtcgaacttcaagccagttggatgaatttcaggaatgcttg
tccaagtttactcgatataattcagtacgacctttggctacattgtcatatgctagtgat
ctctataatggttccagcatagtttctagtattgaatttgaccgggattgtgactacttt
gcaattgctggggttacaaagaagattaaagtctatgaatatggcacagtcattcaggat
gcggtggatattcattaccctgaaaatgaaatgacctgcaattccaaaatcagctgtatc
agttggagtagttatcataagaacctattagccagcagtgattatgaaggcaccgtcatc
ctatgggatggattcacaggacagaggtcaaaggtctatcaggagcatgagaagagatgt
tggagtgttgactttaatttgatggatcctaaactcttggcttcaggttctgatgatgca
aaagtgaagctgtggtctaccaacttggacaactcagtggcaagcatcgaggcgaaggcc
aatgtgtgctgtgtcaaattcagcccctcttccagataccatttggctttcggctgtgca
gatcactgtgttcactactatgatcttcgtaacactaaacagccaatcatggtattcaaa
ggacaccgaaaagccgtttcttatgcaaagtttgtgagtggtgaggaaattgtctctgct
tcaacagacagccagctaaagctgtggaatgtagggaagccatactgcctgcgctccttc
aagggtcatatcaatgaaaaaaacttcgtaggccttgcttccaatggagattatatagct
tgtggaagcgagaacaactctctttacctgtactataaaggactttctaagactttgcta
acttttaagttcgacacggtcaaaagtgttttggacaaagaccgaaaagaagatgacaca
aatgaatttgttagtgctgtgtgctggagggcacttccagatggggagtccaatgtgctg
attgctgctaacagtcagggtacaattaaggtgctagagttggtatga
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