Odocoileus virginianus (white-tailed deer): 110130894
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Entry
110130894 CDS
T10722
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr03015
mRNA surveillance pathway
ovr05134
Legionellosis
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110130894 (HBS1L)
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
110130894 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ovr03019
]
110130894 (HBS1L)
Messenger RNA biogenesis [BR:
ovr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
110130894 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
110130894
NCBI-ProteinID:
XP_020738825
UniProt:
A0A6J0WQR7
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All DBs
Position
34:29045747..29128282
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AA seq
686 aa
AA seq
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MARHRNVRGYNYDEDFEDDDLYGHSVEDDYCISPSTAAQFIYSRRDKPSAVEPVEEYDYE
DLKEFSSSLVNHQLSGIDQARLYSCLDHMREVLGDAVPDDVLVEAVLKNKFDVQKALSVV
LEQDKVQNLKVRSEGAVSTGKIAKGKSIDSQSSQSESEIVPKVTKMTVSGKKQTMGFEVP
RVTAEENGHSFHTPQKGHSSEDTNLVSSDVLESASKSALPSYTMQASEEQSSTPTPVKKS
SKLRQQIDIKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGDVNKRTMHKYEQE
SKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETKTKVITLMDAPGHKDFIPNMITG
AAQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERF
QEITGKLGHFLKQAGFKESDVAFIPTSGLSGENLITRSQSSELTKWYKGLCLLEQIDSFK
PPQRSIDKPFRFCVSDVFKDQGSGFCVTGKIEAGYIQTGDRLLAMPPNETCTAKGITLHD
EPVDWAAAGDHVSLTLVGMDIIKINVGCIFCVPKEPIKVCTRFRARILIFNIEIPITKGF
PVLLHYQTVSEPAVIKRLISVLSKSTGEVTKKKPKLLTKGQNALVELQTQRPVALELYKD
FKELGRFMLRYSGSTIAAGVVTEIKD
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggccaggcatcggaatgtccgaggctataactacgatgaagattttgaagatgatgac
ctctatggccactctgtagaggatgattattgtatttcaccatcaacagctgctcagttt
atttactcacggcgtgacaaaccttcagctgttgaacccgtagaagaatatgattatgaa
gatttgaaagaattctccagttctcttgtgaatcatcagctaagtggaattgatcaagct
cgtctttattcatgccttgatcacatgagagaggtacttggagatgctgtgccagatgac
gtattggttgaagcagttctgaagaacaagtttgatgtgcagaaggctttgtcagtggtt
ctggagcaagataaagtgcagaatttgaaagtcaggagtgagggagcagtatctacagga
aaaatagcaaaaggaaaatcaatagattcccagtcatctcaaagtgaatctgaaattgtg
ccaaaagttactaagatgactgtatctggaaagaagcaaactatgggatttgaagtgccc
agagtaactgctgaagaaaatggtcatagtttccacacacctcaaaaaggacactctagt
gaagataccaaccttgtttcttctgatgtacttgagagtgcttctaaatcagctcttcca
tcctacaccatgcaagcatcagaagagcagagttcaacgccaacaccagtgaaaaagtct
agcaagctgaggcaacaaatagatatcaaagcggaactggagaagcggcaaggaggaaag
cagctgctcaacctagtggtcattggtcatgttgatgctgggaaaagtactctcatggga
catttgctttatcttctgggtgacgtaaacaaaagaactatgcataagtatgaacaagag
tctaaaaaggctggcaaagcttcgtttgcatatgcatgggtcttggatgagactggtgaa
gaaagggaaaggggggtaacaatggatgttggtatgacaaagtttgagaccaaaaccaaa
gttattacattaatggatgctccaggccataaggatttcattccaaatatgattacagga
gcagcccaggcagatgtagctgttttagttgtagatgccagcaggggagagtttgaagct
ggatttgagactgggggacaaacacgagagcatggcctcttggttcgttctcttggagtg
acccaactcgcagttgctgtcaataaaatggatcaggttaattggcaacaagaaaggttt
caagagattactggaaaacttgggcactttcttaagcaagcaggttttaaggaaagtgat
gtagcttttatccctacaagtggtctcagtggtgaaaatctaattacaagatctcaatca
agtgaacttacaaaatggtataaaggactatgtttattagaacaaattgattccttcaag
cctcctcaaagatctatagataagccttttagattctgtgtatctgatgttttcaaagat
caaggatctggattttgtgtaactggcaaaattgaagctggttatatccaaactggtgac
cgactactagcaatgcctcctaatgaaacttgtactgcaaaaggaatcactctgcacgat
gaacctgtcgactgggcggcagcaggagatcatgttagtcttacgttggttggaatggat
atcatcaaaatcaatgttggctgcatattttgtgtccccaaagaacccattaaggtttgc
actcgtttcagagcccgaatcctcatctttaatattgaaattcctatcactaaaggattt
cccgtgctgttacactaccaaaccgtcagtgaacctgctgttattaaaagattgattagt
gtcttaagcaaaagcactggtgaagtcacaaagaaaaagcctaaattgttgaccaaaggc
cagaatgcattagtggagctacagacacaaagaccagtggctcttgagctgtacaaagac
tttaaagagctggggagattcatgctgcgctatagtggttccaccatagctgctggtgta
gtgactgagataaaagattga
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