Odocoileus virginianus (white-tailed deer): 110131113
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Entry
110131113 CDS
T10722
Symbol
UBC
Name
(RefSeq) polyubiquitin-C
KO
K08770
ubiquitin C
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr03320
PPAR signaling pathway
ovr04120
Ubiquitin mediated proteolysis
ovr04137
Mitophagy - animal
ovr04140
Autophagy - animal
ovr05012
Parkinson disease
ovr05022
Pathways of neurodegeneration - multiple diseases
ovr05167
Kaposi sarcoma-associated herpesvirus infection
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110131113 (UBC)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110131113 (UBC)
04137 Mitophagy - animal
110131113 (UBC)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
110131113 (UBC)
09160 Human Diseases
09172 Infectious disease: viral
05167 Kaposi sarcoma-associated herpesvirus infection
110131113 (UBC)
09164 Neurodegenerative disease
05012 Parkinson disease
110131113 (UBC)
05022 Pathways of neurodegeneration - multiple diseases
110131113 (UBC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ovr04121
]
110131113 (UBC)
Ubiquitin system [BR:
ovr04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
110131113 (UBC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
DUF2604
Rad60-SLD_2
Motif
Other DBs
NCBI-GeneID:
110131113
NCBI-ProteinID:
XP_020739182
UniProt:
A0A6J0WMU2
LinkDB
All DBs
Position
12:47440925..47445901
Genome browser
AA seq
1298 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKGKIQEKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED
GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI
PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPS
DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIF
VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE
STLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK
QLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD
KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGVLSSPF
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtaaagaccctcactggtaaaaccatcactctggaggtggagcccagt
gacaccatcgagaatgtcaaggggaaaatacaagaaaaagaaggcatccccccagaccag
cagaggttgatctttgcggggaaacagctggaagatgggcgcaccctgtctgactacaac
atccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatcttc
gtgaagaccctgactggtaagaccatcaccctggaggtggagcccagtgacaccatcgag
aatgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagaggttgatc
tttgcggggaaacagctggaagatgggcgcaccctgtctgactacaacatccagaaagag
tccactctgcacctggtcctccgcctcagaggtgggatgcagatcttcgtgaagaccctg
actggtaagaccatcaccctggaggtggagcccagtgacaccatcgagaatgtcaaggcc
aagatccaagacaaagagggcatccccccagaccagcagaggttgatctttgcggggaaa
cagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtccactctgcac
ctggtcctccgcctcagaggtgggatgcagatcttcgtgaagaccctgactggtaagacc
atcaccctggaggtggagcccagtgacaccatcgagaatgtcaaggccaagatccaagac
aaagagggcatccccccagaccagcagaggttgatctttgcggggaaacagctggaagat
gggcgcaccctgtctgactacaacatccagaaagagtccactctgcacctggtcctccgc
ctcagaggtgggatgcagatcttcgtgaagaccctgactggtaagaccatcaccctggag
gtggagcccagtgacaccatcgagaatgtcaaggccaagatccaagacaaagagggcatc
cccccagaccagcagaggttgatctttgcggggaaacagctggaagatgggcgcaccctg
tctgactacaacatccagaaagagtccactctgcacctggtcctccgcctcagaggtggg
atgcagatcttcgtgaagaccctgactggtaagaccatcaccctggaggtggagcccagt
gacaccatcgagaatgtcaaggccaagatccaagacaaagagggcatccccccagaccag
cagaggttgatctttgcggggaaacagctggaagatgggcgcaccctgtctgactacaac
atccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatcttc
gtgaagaccctgactggtaagaccatcaccctggaggtggagcccagtgacaccatcgag
aatgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagaggttgatc
tttgcggggaaacagctggaagatgggcgcaccctgtctgactacaacatccagaaagag
tccactctgcacctggtcctccgcctcagaggtgggatgcagatcttcgtgaagaccctg
actggtaagaccatcaccctggaggtggagcccagtgacaccatcgagaatgtcaaggcc
aagatccaagacaaagagggcatccccccagaccagcagaggttgatctttgcggggaaa
cagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtccactctgcac
ctggtcctccgcctcagaggtgggatgcagatcttcgtgaagaccctgactggtaagacc
atcaccctggaggtggagcccagtgacaccatcgagaatgtcaaggccaagatccaagac
aaagagggcatccccccagaccagcagaggttgatctttgcggggaaacagctggaagat
gggcgcaccctgtctgactacaacatccagaaagagtccactctgcacctggtcctccgc
ctcagaggtgggatgcagatcttcgtgaagaccctgactggtaagaccatcaccctggag
gtggagcccagtgacaccatcgagaatgtcaaggccaagatccaagacaaagagggcatc
cccccagaccagcagaggttgatctttgcggggaaacagctggaagatgggcgcaccctg
tctgactacaacatccagaaagagtccactctgcacctggtcctccgcctcagaggtggg
atgcagatcttcgtgaagaccctgactggtaagaccatcaccctggaggtggagcccagt
gacaccatcgagaatgtcaaggccaagatccaagacaaagagggcatccccccagaccag
cagaggttgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaac
atccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatcttc
gtgaagaccctgactggtaagaccatcaccctggaggtggagcccagtgacaccatcgag
aatgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagaggttgatc
tttgccgggaaacagctggaagatgggcgcaccctgtctgactacaacatccagaaagag
tccactctgcacctggtcctccgcctcagaggtgggatgcagatcttcgtgaagaccctg
actggtaagaccatcaccctggaggtggagcccagtgacaccatcgagaatgtcaaggcc
aagatccaagacaaagagggcatccccccagaccagcagaggttgatctttgccgggaaa
cagctggaagatgggcgcaccctgtctgactacaacatccagaaagagtccactctgcac
ctggtcctccgcctcagaggtgggatgcagatcttcgtgaagaccctgactggtaagacc
atcaccctggaggtggagcccagtgacaccatcgagaatgtcaaggccaagatccaagac
aaagagggcatccccccagaccagcagaggttgatctttgccgggaaacagctggaagat
gggcgcaccctgtctgactacaacatccagaaagagtccactctgcacctggtcctccgc
ctcagaggtgggatgcagatcttcgtgaagaccctgactggtaagaccatcaccctggag
gtggagcccagtgacaccatcgagaatgtcaaggccaagatccaagacaaagagggcatc
cccccagaccagcagaggttgatctttgcggggaaacagctggaagatgggcgcaccctg
tctgactacaacatccagaaagagtccactctgcacctggtcctccgcctcagaggtggg
atgcagatcttcgtgaagaccctgactggtaagaccatcaccctggaggtggagcccagt
gacaccatcgagaatgtcaaggccaagatccaagacaaagagggcatccccccagaccag
cagaggttgatctttgccgggaaacagctggaagatgggcgcaccctgtctgactacaac
atccagaaagagtccactctgcacctggtcctccgcctcagaggtgggatgcagatcttc
gtgaagaccctgactggtaagaccatcaccctggaggtggagcccagtgacaccatcgag
aatgtcaaggccaagatccaagacaaagagggcatccccccagaccagcagaggttgatc
tttgcggggaaacagctggaagatgggcgcaccctgtctgactacaacatccagaaagag
tccactctgcacttggtcctgcgcttgaggggaggtgttttaagttctcccttttaa
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integrated database retrieval system
