Odocoileus virginianus (white-tailed deer): 110131463
Help
Entry
110131463 CDS
T10722
Symbol
SMARCC2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr03082
ATP-dependent chromatin remodeling
ovr04714
Thermogenesis
ovr05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110131463 (SMARCC2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
110131463 (SMARCC2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
110131463 (SMARCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ovr03021
]
110131463 (SMARCC2)
03036 Chromosome and associated proteins [BR:
ovr03036
]
110131463 (SMARCC2)
Transcription machinery [BR:
ovr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110131463 (SMARCC2)
Chromosome and associated proteins [BR:
ovr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
110131463 (SMARCC2)
PBAF complex
110131463 (SMARCC2)
GBAF(ncBAF) complex
110131463 (SMARCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
Motif
Other DBs
NCBI-GeneID:
110131463
NCBI-ProteinID:
XP_070310893
LinkDB
All DBs
Position
24:52498754..52519051
Genome browser
AA seq
1242 aa
AA seq
DB search
MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNSASHVVYP
VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
VNTKKDSESAPVKGGTMTDLDEQEDESMETMGKDEDESSPGNKGEQTKNPELHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
LVPLQPKTPQGRQGDADTKAGRKGKELDDLVPETAKGKPELQNSASQQMLSFPDKGKEKP
ADMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS
RTQDECILHFLRLPIEDPYLEDSQASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA
SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE
RIEESGTDEARAEGQATEDKKEPKEPREGVGIAEEEAKEKTSEPPKKDDEKGKDGDSEKE
SEKGDGDPTADPEKQKEPKEGQEEVLKEAAESEGERKTKVERDIGEGNLSTAAAAALAAA
AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA
DRQAFHMEQLKYAEMRARQQHFQQMHQPPPPPPPPALPPGSQPVPPPGAAGPPTVHGLAL
APASVAPAPAGSGAPPGSLGPSEPLGQAGPAVGPQQQPAAGAPQAGAVPPGVPPPGPHGP
SPFPNQQTPSVMPGAVPGSGHPGVAGNAPLGLPFGMPPPPPASSVIPFGSLADSISINLP
PPPNLHGHHHHLPFAPATLPPPNLPVSMANPPHPNLPATTTMPSLPLGPGLGSAAAQSPA
IVAAVQGNLLPTASPLPDPGTPLPPDPTAPSPGTVTPVPPPQ
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaggacggcggccccaacgtgaagtactacgaggccgcggacacc
gtgacccagttcgacaacgtgcggctgtggctcggcaagaactacaagaagtatatacaa
gccgaaccgcccaccaacaagtccctgtccagcctggttgtacagctgctgcagtttcag
gaagaagtttttggcaagcatgtcagcaacgcaccgctcactaaactgccgatcaaatgt
ttcctagatttcaaagcaggaggctccctatgccacatacttgcagctgcctacaagttc
aagagtgaccagggatggcggcgctacgatttccagaatccgtcacgcatggaccgcaac
gtggaaatgttcatgaccattgagaagtccttggtgcagaataattgcctgtctcgacct
aacatttttctgtgcccagaaattgaacccaaactgctagggaaattaaaagacattatc
aagagacatcagggaacggtcaccgaggataagaacagcgcttcccacgttgtgtatccc
gtgccagggaacctggaggaagaggaatgggtacggccggtcatgaagagagataagcag
gttcttctgcactggggctactatcctgacagttatgacacatggatcccagccagtgaa
attgaagcatctgtggaagatgctccaactcctgagaagcctcggaaggttcatgcaaaa
tggatcctggacacagacaccttcaatgagtggatgaatgaggaagactacgaagtaaat
gatgacaaaaaccctgtctcccgccgaaagaagatttcagccaagacgctgacagatgag
gtgaacagcccggactcggaccggcgggacaagaaggggggcaactacaagaagaggaag
cgctccccctcgccgtcgccgaccccggaagccaagaagaagaatgccaagaagggcccc
tcaaccccttacaccaagtcaaagcgaggccacagagaggaggagcaggaggacctgacg
aaggacatggatgagccctcgcccgtccccaacgtggaggaggtgacactgcccaagaca
gtcaacactaagaaggactcggagtcagccccagtcaaaggaggcaccatgaccgacctg
gatgaacaagaggatgaaagcatggagaccatggggaaggacgaggacgagagcagcccg
ggcaacaagggggagcagaccaagaacccggagctgcacgaggacaacgtgaccgagcag
acccaccacatcatcatccccagctacgcggcctggtttgactacaacagtgttcacgcc
atcgaacggagggctctccccgagttcttcaatggcaagaacaagtccaagactccagaa
atctacctggcctatcggaacttcatgattgacacttaccggctgaacccccaagagtat
ctcacgtccaccgcctgtcgcaggaacctggcaggggatgtctgtgccatcatgagggtc
catgccttcctagagcagtggggtctcatcaactaccaggtggatgccgagagtcgacca
actcctatggggcctccacccacttctcacttccacgtcttggcggacacaccgtcaggg
ctggtgccgctgcagcccaagaccccgcagggccgccagggtgatgctgataccaaggct
gggcgaaagggcaaagagctggatgacctggtgccagagacggctaagggcaagccagag
ctgcagaactccgcttcccagcaaatgctcagcttccccgacaaaggcaaggagaaaccg
gcggacatgcagaacttcgggctgcgcacggacatgtacacgaagaagaacgtgccctcc
aagagcaaagccgcagccagcgccactcgcgagtggacggaacaggagaccctgctgctc
ctggaggcgctggagatgtacaaggacgactggaacaaggtgtccgagcacgtgggcagc
cgcacgcaggatgagtgcatcttgcatttcctccggctgcccatcgaagacccgtacctg
gaggactcgcaggcctccctgggccccctggcctaccagcccatccccttcagccagtca
ggcaaccctgtgatgagcaccgttgccttcctggcctctgtcgtcgaccctcgagtggcc
tcagctgctgcgaagtcagccctagaagagttctccaaaatgaaggaagaggtccccaca
gctttggtggaggcccacgttaggaaagtggaagaagctgccaaagtgacaggcaaggcg
gacccagcctttggtctggaaagcagtggcatcgcagggaccacctccgacgagccagag
aggatcgaggagagcgggactgacgaggcgcgggcggagggccaggccacagaggataag
aaggaacccaaggaacctcgagaaggagttgggattgcggaggaagaagcaaaggagaag
accagtgagccacccaagaaggacgatgagaaggggaaagacggcgacagcgagaaggag
tcagagaagggtgacggagacccgacagcggatcctgagaagcagaaggagcccaaggag
gggcaggaggaggtgctgaaagaagccgcggagtcggagggggagcggaagacgaaggtg
gagcgtgacatcggcgagggcaacctctccactgctgccgccgctgccctggctgccgcc
gccgtgaaggccaagcacttggctgccgttgaggagaggaagatcaaatctctggtggcc
ctgctggtggagacccagatgaaaaagctggaaatcaaactccggcactttgaggagcta
gagacgatcatggaccgggagcgggaagcgctggagtaccagaggcagcagctgctggcc
gacagacaagccttccacatggagcagctgaagtacgcagagatgcgggcccggcagcag
cacttccagcagatgcaccagccgccgccgccgccgccgccaccggccctgcccccgggc
tcccagccagtcccgcctccaggcgccgccgggccccccactgtccacggcttggccctg
gctccagcctctgtggccccggcccctgcgggcagcggggcccctcctggaagcctgggg
ccctccgaaccgctcgggcaggcagggcctgctgtggggccacagcagcagccagcagcg
ggagccccgcaggctggggccgtcccaccaggggtgccgccccctggaccccacggcccc
tcaccgttccccaaccaacaaactccctcagtgatgccaggggcagtgccaggcagcggg
cacccaggcgtggcgggtaatgctcctttgggtttgcctttcggcatgccgcctccccct
cccgcatcatccgtcatcccgtttggtagcctagccgactccatcagtattaacctcccc
cctcctcctaacctgcatgggcatcaccaccatctcccgttcgccccggccacgctcccc
ccacctaacctgcctgtgtccatggcgaaccctccacaccctaacctgccggcgaccacc
accatgccatctttgcctctcgggccggggctcggatccgccgcagcccagagccctgcc
attgtggcggctgttcagggcaacctgctgcccactgccagcccgctgccagacccaggc
acccccctgcctccagaccccacggccccgagcccaggcacagtcacccccgtgccaccc
ccacagtga
DBGET
integrated database retrieval system
