Odocoileus virginianus (white-tailed deer): 110131678
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Entry
110131678 CDS
T10722
Symbol
LSM4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4 isoform X1
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr03018
RNA degradation
ovr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110131678 (LSM4)
09123 Folding, sorting and degradation
03018 RNA degradation
110131678 (LSM4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ovr03019
]
110131678 (LSM4)
03041 Spliceosome [BR:
ovr03041
]
110131678 (LSM4)
Messenger RNA biogenesis [BR:
ovr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110131678 (LSM4)
mRNA degradation factors
5'-3' decay
Lsm complex
110131678 (LSM4)
Spliceosome [BR:
ovr03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
110131678 (LSM4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
110131678
NCBI-ProteinID:
XP_020740131
UniProt:
A0A6J0WTY7
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All DBs
Position
3:4344961..4357170
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AA seq
139 aa
AA seq
DB search
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEEVVAKGRGRGGLQQQKQQKGRGMGGAGRGVFGGRGRGGI
PGTGRGQPEKKPGRQAGKQ
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atgcttcccttgtcgctgctgaaaacggctcagaatcacccaatgttggtagagcttaaa
aatggggagacatacaacgggcacctggtgagctgtgacaactggatgaacatcaacttg
cgtgaggtgatctgcacatccagggacggggacaaattctggcggatgcccgagtgctac
atccgtggcagcaccatcaagtacctgcgcatccccgacgagatcatcgatatggtcaag
gaggaggtggtggccaagggccgtggccgcggtggcctgcagcagcagaagcagcagaag
ggccgcgggatggggggcgccgggcgaggtgtgttcggtggccggggccgaggtgggatc
cccgggactggcagaggtcagccagaaaagaagccaggcagacaggcgggcaaacagtga
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