Odocoileus virginianus (white-tailed deer): 110131709
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Entry
110131709 CDS
T10722
Symbol
NCAN
Name
(RefSeq) neurocan core protein
KO
K06794
neurocan core protein
Organism
ovr Odocoileus virginianus (white-tailed deer)
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ovr00535
]
110131709 (NCAN)
00536 Glycosaminoglycan binding proteins [BR:
ovr00536
]
110131709 (NCAN)
04091 Lectins [BR:
ovr04091
]
110131709 (NCAN)
Proteoglycans [BR:
ovr00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
110131709 (NCAN)
Glycosaminoglycan binding proteins [BR:
ovr00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
110131709 (NCAN)
Lectins [BR:
ovr04091
]
C-Type lectins
Lecticans
110131709 (NCAN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
EGF
V-set
EGF_TEN
hEGF
EGF_2
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
110131709
NCBI-ProteinID:
XP_020740198
UniProt:
A0A6J0WR88
LinkDB
All DBs
Position
3:complement(3501242..3525993)
Genome browser
AA seq
1368 aa
AA seq
DB search
MGALFVWVSGLLTLHMLLFVAGEQGLQHTTAAAATAEKGLHMQKVGSGSVRAALAELVAL
PCLFSLRPRPGAAREAPRIKWTKVRTASGQRQDLPILVAKDNVVRVAKGWQGRVSLPAYP
RHRANATLLLGPLRASDSGLYRCQVVRGIEDEQDLVPLEVTGVVFHYRAALDRYSLTFAE
AQEACRLNSATIAAPRHLQAAFEDGFDNCDAGWLSDRTVRYPITQSRPGCYGDRSSLPGV
RNYGRRDPRELYDVYCFARELGGEVFYVGLARRLTLAGARAQCRRQGAVLASVGQLHLAW
HEGLDQCDPGWLADGSVRYPIQTPRRRCGGPAPGVRTVYRFANRTGFPAPGERFDAYCFR
AHHPTSQHGDSETPSSGDEGEILSAEGAPAGDLEPSLQEEEEVVTPDVQEPLVSSGEEES
LILAEKQESQTTPSRAPGFPTLASSPALETEEVWLSTVAPSPGSVEAGTVLGTHAETAPA
STTPRKRERFKGLNGRHFQQQEPQQGLKGALEASVQPPTPEATGNYVEPPMTTGATDALG
SGQSQSPWAVLTNEVEMPRAGSLGGRSPQDPWLWPPTVVPPIIPDPSRALDLELGEAKRF
SVRPVTSDLPWSPSETTPNPSSGPSPAPWEASPTVISPDLPVMAMLRAPKLWLLSQEPPT
PLPTEASGVKGRSVAMATAPPSPASEMEASPQDPIHPEVYSLPSSSGLAGQDGESTSLSL
SGHGGGSPPAPSQAAIDTQAGASPNSPGVDFGETRGASPTELSKAEHPGSSPQASVDGNV
GADITVSETATEPLGARGVSESESGVFNTAESPTSSLQASMDKTQGTWASLHRGGLDPHS
LSAPLGVPEVSLMPKVTTPHSGPWAATGGGVTVDPMDSTVTLDTSDAVGYWEPGSHMIEG
AKSSTLSPQMAVDTSVVTSLTSLDLGDKVGVLSPFTVASSSSRPHPEPEGQLVTQGTLGA
VEPPQEGSHSGDPILPPWTSTAANKDEPISVSSGETTVPWDSPSTLLPASLGPEEFELEV
LVGSPGVESFWEEAASGEEPALPGTPANGSAEEVPLDPCENNPCLHGGTCRANGTMYGCS
CDQGFAGENCEIDIDDCISSPCENGGTCIDEVNAFVCLCLPSYGGSLCEKDTEGCDHGWH
KFQGHCYRYFAHRRAWEDAERDCRRRAGHLTSIHSPEEHNFINSFGRENMWIGLNDRIVE
RDFQWTDNTGLQFENWRENQPDNFFAGGEDCVVMVAHESGRWNDVPCNYNLPYVCKKGTV
LCGPPPAVANASPIGARKAKYNVHATVRYQCDEGFAQHHVAIIRCRSNGKWDRPQIVCTK
PRRSHRMRRHHHHHQHHHQHRHHKSRKERRKHKKHPAEDWEKEEGNFC
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atgggggccttgtttgtctgggtctcaggcctcctgactctgcacatgcttctctttgtg
gctggggagcagggcctacagcacaccaccgcagctgcagccactgctgagaaggggctc
cacatgcaaaaagtggggtctgggtcagtccgggctgcgctggcagagttggtggccctg
ccctgtctctttagcctgcggccacggccaggtgcagctcgagaagccccacggatcaag
tggaccaaggtgcggactgcatcaggccagcggcaggacttgcccatcctagtggccaag
gacaacgtggtccgagtcgccaagggctggcagggacgtgtgtcacttcccgcctacccc
cggcaccgggccaacgccacgttgctactgggaccactgagggccagcgactccgggctc
taccgctgccaggtggtgaggggcatcgaggatgagcaggacctggtgcccctggaggtg
acgggtgttgtgttccactaccgagcagcgctggatcgctactctctgacctttgctgag
gctcaggaggcctgtcgtctcaactcagccaccattgcagccccgcggcacctgcaggct
gcctttgaggacggctttgacaactgcgacgccgggtggctctctgaccgcactgttcgg
tatcctatcacccagtcccgtcctggttgctatggtgaccgtagcagccttccgggggtg
aggaactatgggaggcgagacccacgggaactctacgatgtgtattgctttgcccgtgag
ctggggggcgaagtcttctacgtaggcctggcccgccgcctgaccctggccggcgcgcgt
gcgcagtgccgacgccagggcgccgtgctggcctcggtaggacagctgcacctggcctgg
cacgagggcctggaccagtgcgacccgggctggctggccgacggcagcgtgcgctacccg
atccagacgccgcgtcggcgctgcggtggcccagccccgggcgtgcgcaccgtataccgc
tttgccaaccgcacgggcttcccggcacctggagagcgcttcgatgcctactgcttcaga
gctcatcaccccacatcccaacatggagactcagagaccccctcatctggggatgagggg
gagattctgtcggcagaaggggcccctgctggagatctggagcccagcctgcaggaggag
gaggaggtagtcaccccagacgtccaggagcctctggtgtctagtggggaagaagagtct
ctgatcttggcagagaagcaggagtctcaaacgacccccagccgtgcccctgggttcccc
acattagcctcaagtcctgccctggagactgaggaggtgtggctgagcaccgtggccccc
agccccggcagcgtggaggcaggcactgtgttgggcacgcacgcagagacagccccagcc
agcaccacacccaggaagagggagcgctttaaagggttgaacgggcgccacttccagcaa
caggaaccccagcaagggctgaagggggcacttgaggccagcgtccaacccccgacccca
gaggctactgggaattatgtggagcctcccatgaccactggagccacagacgccttgggg
agtggccagagccagagcccctgggctgtgctgacaaatgaggtggaaatgcccagagct
ggttcccttggtggcaggagcccccaagatccctggctgtggcccccaaccgtggtcccg
cccatcatcccagaccccagcagagcccttgacctggaactaggagaagccaagcgcttt
agtgtgagaccagtcacctccgacctgccctggtccccctcggagaccactcccaacccc
tccagtggccccagccctgccccctgggaggcttctcccacggtcatttctccagacctc
cctgtgatggccatgcttcgcgcccccaaactgtggcttctatcacaggagcctcctaca
ccgctccccactgaggccagtggagtcaaggggcgtagtgtggccatggccactgccccg
ccctcccctgcctcggaaatggaagccagtccacaggatcccatccatccagaagtgtat
tccctgccctcctcctctggcctggcaggacaagatggagagtccacatccctgtctctc
agcggccacggaggaggaagtcctccggccccttcacaggcagccatagacacacaagct
ggagccagtcctaattcccctggagtagactttggagaaacgaggggggccagccctact
gagctcagcaaagctgagcaccccggatccagcccacaggcctctgtggacgggaatgtg
ggggcagatatcactgtttctgagactgccactgagcccctgggagccagaggcgtctcg
gagtctgagtcaggggtcttcaacacagcagagagtcccacctccagcttgcaggcctcc
atggataagacgcagggaacatgggcctcactgcacaggggagggctggacccccactcc
ctatctgcacccttgggggtccctgaagtctccttgatgcccaaggtcaccaccccacat
tcggggccttgggctgctacaggtggaggagtcacagtggatcctatggattccacagtc
acactggacaccagcgatgctgtcgggtattgggaacctggatcccacatgattgaggga
gccaaaagctccaccttgagccctcagatggctgtggatacaagtgtggtgacatccctc
acgtccttggacctgggggacaaggtcggggtcctgtccccgttcacagtggcctcctca
agctcccggccccacccagagccagagggccagctggtgacccagggaacactgggagcc
gtggagcctccacaggagggcagccactcgggggaccccattcttcctccctggacgtcg
acagcagccaacaaggacgagcccatttcagtttcctcaggggagactacagtgccgtgg
gactcccccagcaccctgctgcctgcctccctgggcccagaggaatttgagctggaggtc
ctggtggggagcccaggtgtggagagcttctgggaggaggcagcaagtggagaggagccc
gccctgccagggactcctgcaaatgggagtgcggaggaggtccccctggatccctgtgag
aacaacccttgcctgcatggcggcacctgtagggccaatggcactatgtacggctgcagc
tgtgaccagggctttgctggagagaactgtgagatcgatattgacgattgcatctccagc
ccctgtgagaacggtggcacctgcatcgacgaggtcaacgcctttgtctgcctttgcctt
cccagctatgggggaagcctctgcgagaaagacacagagggctgtgaccacggctggcac
aagtttcagggccattgctaccgctactttgcccaccggcgggcatgggaggacgccgag
agggactgccgccgacgagccggccacctgaccagcatccactcaccggaagaacacaac
ttcattaacagttttgggcgtgagaacatgtggatcggcctgaacgacaggatcgtggag
agggatttccagtggaccgacaacacagggctgcaatttgagaactggcgggaaaatcag
ccggacaatttcttcgcgggtggggaggactgtgtggtgatggttgcacatgagagcggg
cgctggaacgacgttccctgcaactacaacctcccctatgtctgtaagaagggcacagtg
ctgtgtggtccccctccagcagtagcgaacgcctcgcccattggcgcccgcaaggccaag
tacaatgtccatgccacagtacgctaccagtgcgacgaaggatttgcccagcaccacgtg
gccatcatccggtgccggagcaatggcaaatgggaccggccccaaatcgtctgcaccaaa
cccagacggtcccacaggatgcggcgacaccaccatcaccaccagcatcaccaccagcat
cgccaccacaaatctcgcaaggagcgcagaaaacacaagaagcacccagcagaggactgg
gagaaggaagaagggaatttctgttga
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