Odocoileus virginianus (white-tailed deer): 110131826
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Entry
110131826 CDS
T10722
Symbol
SUPT6H
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
ovr Odocoileus virginianus (white-tailed deer)
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ovr03021
]
110131826 (SUPT6H)
03036 Chromosome and associated proteins [BR:
ovr03036
]
110131826 (SUPT6H)
Transcription machinery [BR:
ovr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
110131826 (SUPT6H)
Chromosome and associated proteins [BR:
ovr03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
110131826 (SUPT6H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
110131826
NCBI-ProteinID:
XP_020740427
UniProt:
A0A6J0WWF0
LinkDB
All DBs
Position
17:18957172..18987618
Genome browser
AA seq
1726 aa
AA seq
DB search
MSDFVESEAEESEEEYNDEGEVVPRVNKKFVEEEDDDEEEEEENLDDQDEQGNLKGFIND
DDDEEEGEEDEGSDSGDSEDEVSHKKRKRTSFDDRLEDDDFDLIEENLGVKVKRGQKYRR
VKKVSDDEDDEEEEYGKEEHEKEAIAEEIFQDGEGEEGQEAVEAHMAPPEEEEEDDEESD
IDDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEELEEEY
EYEDDEAEGEIRVRPKKTTKKRVSRRSIFEMYEPSELESSHLTDQDNEIRATDLPERFQL
RSIPVKGAEDDELEEEADWIYRNAFATPTISLQESCDYLDRGQPTSSFSRKGPSTIQKIK
EALGFMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLRIRKENLTRLFEKM
QAYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQN
AAKASRKKLKRVREEGDEEGDGEEAEDEEQRGPELKQASRRDMYTICQSAGLDGLAKKFG
LTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARYMVALQIAREP
LVRQVLRQTFQERAKLNISPTKKGRKDVDEAHYAYSFKYLKNKPVKELRDDQFLKICLAE
DEGLLTIDISIDMKGVEGYGSDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERALQQF
LYVQMAKELKNKLLAEAKEYVIKACSRKLYNWLRVAPYRPDQQVEEDDDFMDENQGKGIR
VLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKKAQDIETLKKFL
LNKKPHVVTVAGENRDAQMLIEDVKRIVHELDQGQQLSSIGVELIDNELAILYMNSKKSE
AEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFHPLQEHVVKEELLNALYC
EFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKILKQNNTRLESRTQLVTM
CHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESA
EDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTA
YRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPF
CQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVG
MTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPKDTYYDFDAEAADHKQEEDLKRKQ
QRTTYIKRVIAHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSDGIYQH
VDVREEGKENAFSLGATLWINSEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCSGGDR
KKLEELLIKTKKEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQV
FPTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMT
SQMFNAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFPTPAQQPVATPLMTPS
YSYTTPSQPITTPQYHQLQASTTPQSAQAQPQPSSSSRQRQQQPKSNSHAAIDWGKMAEQ
WLQEKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattttgtggaaagcgaggccgaggagtccgaggaagagtacaatgatgaagga
gaagtggtgccccgggtcaacaagaaatttgtagaagaggaggatgacgatgaggaggag
gaggaggagaacctggatgatcaggatgaacaaggaaacctgaaaggctttatcaatgat
gatgacgatgaagaggaaggggaggaggatgagggtagtgactctggagattcggaagat
gaagttagccacaagaagagaaaacgcacatcttttgacgaccgcctggaggatgatgat
tttgatctcattgaggagaatttgggtgtcaaagtcaaaagaggacaaaaataccgacgt
gtcaaaaaagtctctgatgatgaggacgacgaggaggaggaatatggcaaggaagaacat
gaaaaagaagctatcgcagaggagatctttcaggatggggaaggggaagaagggcaggag
gccgtggaggcccacatggctcctccagaagaggaggaggaagatgatgaagagtcagac
attgatgactttattgtggacgatgatggacaacctctgaaaaaacctaagtggcggaaa
aagcttcctggatacactgatgcggctctgcaggaagcccaggagatttttggtgtggac
tttgactacgatgaatttgagaaatacaatgagtacgacgaagaactggaggaagagtat
gagtatgaggacgatgaggctgagggtgagatccgagtgcgccccaagaagaccaccaag
aaacgtgtgagccgcaggagcatcttcgagatgtatgagcccagtgagctggaaagcagc
cacctcacggatcaggacaatgaaatccgagccactgacttgcctgagagattccagctc
cgttccatccccgtcaagggggctgaagatgatgaactggaagaagaggcagactggatc
tacaggaatgcctttgccacaccaaccatttctctgcaggaaagctgtgattacctagac
cgagggcagccaaccagcagcttcagtcgaaaagggcccagcacaattcagaagattaaa
gaggccctgggcttcatgcgaaatcagcattttgaggtgcctttcattgctttctaccgg
aaggagtatgtggagcctgagttgcatatcaacgacctgtggagggtgtggcagtgggat
gaaaagtggacccagctgaggattcgtaaggagaacctaacacggctgtttgagaagatg
caggcttatcagtacgagcaaatctctgctgatcctgacaagccccttgctgatggcatc
cgggctctggacaccacggacatggagaggctcaaggatgttcaatcaatggatgaactg
aaagatgtctacaatcattttctgctctattacggtcgtgacatccctaagatgcagaat
gccgccaaggccagccgcaagaagctaaagcgtgtaagggaagagggagatgaggaaggt
gatggtgaggaggcagaagatgaagagcagagagggccagagctcaagcaggcttctcga
cgagacatgtacaccatctgccagagcgctgggctagatggcctagccaaaaagtttggg
cttactcctgagcaatttggggaaaacctccgggacagctaccagcggcatgagacggag
cagtttccagcagagcccttggaactggcaaaggactatgtttgcagccagttccctacc
ccggaagccgtgctggaaggtgcccgctacatggtagccctgcagattgcccgagagccc
ctcgtccggcaggtgctgagacagactttccaggaaagggccaagctcaatataagcccc
actaagaaaggtagaaaggatgtggatgaggcccactatgcttactccttcaagtactta
aagaacaagcctgttaaggaactgagagatgaccagttcctcaagatctgcctggctgaa
gatgaagggctgctcaccattgatatcagcattgatatgaagggagtagaaggctatggc
agtgaccagacgtatttcgaagaaatcaaacaattttactaccgagatgagttcagccat
caggtgcaggagtggaaccggcagcgcaccatggccatcgagcgagctttacagcaattc
ttgtatgtgcagatggccaaagagctcaagaacaagctgctggctgaagccaaagaatat
gtcataaaggcctgcagtcgaaagctctacaactggttgagggtggcgccctacaggcca
gatcaacaagtagaagaagacgacgactttatggatgagaaccaagggaagggcatccgg
gtcctaggcattgctttctcctctgccagagatcaccctgtgttctgcgccttggtcaat
ggtgaaggagaagtgacagacttcctccggctgcctcattttaccaaacggcgaactgca
tggagagaggaagagcgggagaagaaggctcaagacattgaaactctgaagaaattcctt
ctgaacaaaaagcctcacgtggtgacagttgcaggagagaacagggatgcccagatgttg
attgaggatgtgaagcgcatcgtgcatgagctggaccaaggtcagcagctgtcctctatt
ggggtggagctgattgacaacgagttggccatcctctatatgaacagcaagaaatcagag
gcagagttccgggattaccctcctgtgctgagacaggccgtctccctggcccggcgcatc
caggaccctctgattgagtttgcccaggtgtgcagctcagatgaagacatcctgtgcctc
aagtttcaccccttgcaggagcatgtggtgaaagaagagctactcaatgccctgtactgt
gaattcatcaaccgagtcaatgaggttggagttgatgtcaaccgtgccattgcgcacccc
tacagccaggccttgattcagtatgtctgtggcctgggacctcgaaaagggacccatctt
ctgaagattctgaaacagaacaacaccaggctcgagagccggactcagctggtcaccatg
tgccacatgggtcccaaagtcttcatgaattgcgctggcttcctcaagattgacaccgcc
tccctgggggacagcactgactcatacattgaagtccttgatggttcccgagttcaccct
gagacttatgagtgggccaggaagatggcagtggatgctctagaatatgatgaatcagct
gaggatgccaaccctgcgggagcccttgaagaaatcttggaaaacccagagcgactcaag
gacctagaccttgatgcctttgcagaagaactggagaggcagggctatggtgacaaacac
atcacgctgtacgacatccgagcggagctgagctgtcgatataaggacctccggaccgcc
taccgctctcctaacacagaggaaatcttcaatatgttaaccaaagaaacaccagagacc
ttctacattggaaagctcattatctgcaacgtcaccggcatcgcccacaggcgtccacag
ggtgagagctacgaccaggcaatccgcaacgatgagacggggctgtggcagtgccctttc
tgtcaacaggacaatttcccggaactaagcgaggtctggaaccactttgacagcggttca
tgcccaggccaggccatcggtgtcaaaacacggctagacaatggtgtcactggcttcatc
cccaccaaattcctcagtgacaaagtggtaaagcggccagaggaacgagtgaaggtggga
atgactgttcattgccgcatcatgaagattgacatcgagaagtttagtgcagacctgacc
tgccgcacctcggacctcatggataggaacaacgagtggaagctgcccaaggacacctac
tatgactttgatgccgaagcagcagaccacaagcaggaagaggacctgaagcggaagcag
caacggaccacatatatcaagcgagtgattgcacatccatccttccataatataaatttt
aagcaagcagaaaaaatgatggaaaccatggaccagggtgacgtgatcatccgaccgagc
agcaagggcgagaatcacctgacagtgacctggaaggtcagtgacggcatctaccagcac
gtggatgtgcgggaagagggcaaggaaaacgccttcagcctgggagccaccctgtggatc
aacagtgaggagtttgaagacttggatgagattgttgcccgctatgttcagcctatggca
tcctttgcccgggaccttctaaaccacaaatattatcaggactgcagtggtggggaccgt
aagaaattagaggagctgctcatcaaaactaagaaggagaagcccaccttcattccctat
ttcatctgtgcctgcaaggaactgcccggcaagttcctactgggataccagccccggggt
aaacccaggatagaatatgtaactgtgactccagaaggattccggtaccggggccaagtc
tttcccactgtgaacggccttttcagatggtttaaggatcactatcaggatcctgtacca
ggcatcacccccagtagcagcagcaggacccgaacacctgcttctatcaatgctacgcca
gccaacatcaaccttgcagatctcacgcgggctgtgaacgccctgccccagaacatgacc
tcgcagatgttcaatgccattgctgccgtgacaggccagggccagaaccctaatgctacc
ccggcacagtgggcctccagccagtatggctatggtggcagcggagggggcagtagcgct
taccatgtattcccaacaccagcccagcagccagtggccacaccactaatgacccccagc
tactcctacacaacacccagccaacccatcaccacgccacagtaccaccagctgcaggcc
agcactaccccacagtctgcccaggcccagccccagccctcctccagctcccggcaacgg
cagcagcagccaaagtccaacagccatgcagccatcgactggggcaagatggcagagcag
tggttgcaggagaaggaggcggagcggcggaaacagaagcagcggctgacccctcggccc
tcccccagccctatgatcgaaagcacccccatgtctattgctggcgatgccaccccactc
ctggacgagatggatcggtag
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integrated database retrieval system
