Odocoileus virginianus (white-tailed deer): 110131977
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Entry
110131977 CDS
T10722
Symbol
NCSTN
Name
(RefSeq) nicastrin
KO
K06171
nicastrin
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr04330
Notch signaling pathway
ovr05010
Alzheimer disease
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
110131977 (NCSTN)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
110131977 (NCSTN)
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Gene cluster
GFIT
Motif
Pfam:
Nicastrin
Ncstrn_small
Peptidase_M28
Motif
Other DBs
NCBI-GeneID:
110131977
NCBI-ProteinID:
XP_020740683
UniProt:
A0A6J0WSM5
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Position
5:17444837..17459070
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AA seq
709 aa
AA seq
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MATAGGGSVADPGSRSLLRLLSFCVLLAGLCEGNSVERKIYIPLNKTAPCVRLLNATHQI
GCQSSISGDTGVIHVVEKKEDLQWVLTDGPNPPYVVLLEGTLFTRDVMEKLKGRSGRIAG
LAVSLAKPSPASGLSPSVQCPNDGFGVYSNSYGSQFAHCRAFQWNKVGDGLAYEDFSFPI
FLLEDENETNVVKQCYRDHNLGQNGSAPAFPLCAMQLFSHMHAVISTVTCMRRSFIQSSF
SINPEIVCDPLSDYNVWSMLKPINVSGTLEPGDRVVVAATRLDSRSFFWNVAPGAESAVA
SFVTQLAAAEALQKAPDVTTLPRNVMFVFFQGEIFDYIGSSRMVYDMENGKFPVQLENIE
AFVELGQVALRNSLELWMHTDPMSQKNETVLNQVEALLSTLEKSGAAVPAVVLRRLNQSQ
PLPPSSLQRFLRARNISGVVLADHSASFHNLYYQSVYDTAENINVTYPEGQSPEEDLNFV
TDTAKALADVATVLARALYQLAGGTSFSDTIEADPHTVTRLLYGFLVRANNSWFQSILRP
DLRPYLGDGPLQHYIAVSSPTNTTYVVQYALANLTGKVIDLTREQCQDPSQVPTEDKDLY
EYAWVQGPLDANETDRLPRCVRSTARLARALSPAFELKQWGSTEYSTWTESRWKDIRARI
FLIASKELEFITLIVGFGILVFSLIVTYCINAKADVLFITPREPGSVSY
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgctgggggcggctctgtggccgacccgggaagtaggagtcttcttcgcctt
ctgtctttctgcgttctactggcaggtttgtgcgaaggaaactcagtggagaggaagatc
tacatccccttaaataaaacagctccctgtgtccgtctgcttaatgctacccatcagatt
ggctgccagtcttccattagtggggacacaggggttatccacgtagtagagaagaaagag
gacctgcagtgggtgttgactgacggccctaaccccccttacgtggttctgctagagggc
acactctttaccagggatgtgatggagaagctgaaggggagatccggccgaattgctggt
cttgcagtgtctttagccaagcccagtcctgcctcaggcttgtctcccagtgtgcaatgc
cccaatgatgggtttggtgtttactccaactcttacgggtcacagtttgctcactgcaga
gcctttcagtggaacaaggtgggcgacggcttggcttatgaagacttcagtttccccatt
tttcttcttgaagatgaaaatgaaactaatgtcgttaagcagtgctaccgagatcacaac
ctgggtcagaacggctcggcgccggccttcccactgtgtgccatgcagctcttctcacac
atgcacgccgtcatcagcaccgtcacctgcatgcgacgcagcttcatccagagctcattc
agcatcaacccagagatcgtctgtgacccactgtccgactacaacgtgtggagcatgctg
aagcctataaatgtatctgggacgctggagccgggcgacagggttgtggtggctgccacc
cgactggacagtcgttcttttttctggaatgtggccccaggggctgaaagcgcagtcgcc
tccttcgtcacgcagctggctgcagccgaagctctgcagaaggcacctgatgtgaccacc
ttgccccgcaacgtcatgtttgtcttcttccaaggggaaatctttgactacatcggcagc
tcgaggatggtctacgacatggagaatggcaagttccctgtgcagctcgagaatattgaa
gcgtttgtggagctgggacaggtggccttaagaaactcactagagctttggatgcacaca
gaccccatgtctcagaaaaatgaaactgtactaaaccaggtggaggcgctcctgagcacc
ctggagaagagtggcgctgctgtccctgccgtcgtcctcaggaggctgaaccagtcccag
cctctgccaccatcttctctgcagcgatttcttcgagctcgaaacatctctggcgttgtt
cttgctgaccactctgcttccttccataacctctattaccaaagcgtttacgacaccgcg
gaaaacattaacgtgacctaccctgaagggcagagtcctgaggaggacctgaactttgtg
acagacacggccaaggctctggcagatgtggccacagtgctggcacgcgcactgtaccag
ctcgcaggaggaaccagcttcagtgacaccatagaggctgatccccacacggttacccgc
ctgctctatgggttcctggttagagccaacaactcgtggttccagtctattctcaggccg
gacctaaggccctacttgggtgatgggcctcttcagcattacatcgccgtctccagcccc
accaacaccacttacgttgtacagtacgccttggccaacttgactggcaaggtgatcgac
ctcacccgggagcagtgccaggacccaagtcaagtccccactgaagacaaggatctgtac
gaatatgcctgggttcagggccctttggacgccaatgagacggaccggctcccccggtgc
gtgcgctccacggcacgcctggccagggccttgtcccctgcctttgagctgaagcagtgg
ggctccaccgagtactcgacatggaccgagagccgctggaaagacatccgcgcccggata
tttcttatagccagcaaagagctggagtttatcaccctgatagtgggcttcggcatcctc
gtcttttctctcatcgtcacctactgcatcaatgccaaagccgatgtccttttcatcact
ccccgggagccaggatctgtgtcttactga
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