Odocoileus virginianus (white-tailed deer): 110132421
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Entry
110132421 CDS
T10722
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM47-like
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr04064
NF-kappa B signaling pathway
ovr04622
RIG-I-like receptor signaling pathway
ovr05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
110132421
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
110132421
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
110132421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ovr04121
]
110132421
Enzymes [BR:
ovr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110132421
Ubiquitin system [BR:
ovr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
110132421
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRIM_CC
SPRY
zf-RING_UBOX
zf-C3HC4_4
zf-B_box
RING_XB3-XBAT31
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_5
TRAF3_RING
Sina_RING
EGF_integrin
Motif
Other DBs
NCBI-GeneID:
110132421
NCBI-ProteinID:
XP_020741453
UniProt:
A0ABM4J7Q6
LinkDB
All DBs
Position
17:complement(53444965..53451821)
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AA seq
599 aa
AA seq
DB search
MQRVSQPVQDQAPALQPTAKLSGPPQGRFLMDDSSLCTLEDQVLCPVCLEVFRNPVTTAC
GHNFCMSCLQGFWDYQATMGEPLYCPQCREGFPTRPRLCKNVILEEMVTCFTQAKGQTLG
SSLSLAGPRDVPCDFCAPEKLKSIKSCLQCMASLCEKHLRSHFEDQVFHGHQLLEPVWDL
KSRLCRKHRKLRRLYCRTEGCCVCGACLLEEHKNHDTIPLEEERAHKEVEVRKVQANVEN
QMLIITSDSQKHRGQVAFLSKLIQTTREEVNACFSEIIQEIKQMQMKVLDFVEKEEAAAL
GKLGGSIQQSHNRLLKLEGDSIWLRSLLANRSDQQFLQELPRLKHFPACMEPLMGTNCEE
KQSFLQLPETLTELRTRLVDMGLSFINQLLLKGIKMNSYEVLPPDVDRKTLLKCYCNLNF
DPTTASEELFLFKETHSVLNLGILLEPFAAGSLFPGFKQWPQVLCSRGLAEGRHYWEADV
SNSWVCLGVTYRRSPPLGGRPRRNIVYLLGRNPYSWCLEWDSLKFSVWHNNTQTVLHGGY
HRTLGVALDCAAGCLSFYGVAGGVSLLYRFLASFLEPLYPAVMVSSGASVTLKQHPSEA
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgcagagagtttcacagccagtccaggaccaagccccagccctgcagcccacggccaag
ctctcgggacctccgcaaggccggttcctgatggacgacagcagtctctgcacgctggag
gaccaagtcctctgtcccgtttgcctggaggtgttccgcaacccggtcaccaccgcctgc
gggcacaacttctgcatgagctgcctccagggtttctgggactaccaggccaccatgggc
gagcccctctactgcccccagtgccgggagggcttccccacgcggcctcgcctctgcaag
aacgtcatcctggaggagatggtgacctgcttcacccaggccaagggccagaccttgggg
tcctcactgagcctggccgggcccagggacgtgccctgcgacttctgtgcccccgagaag
ctcaagtccatcaagtcgtgcctgcagtgcatggcctccctgtgcgagaagcacctgcgc
agccactttgaggaccaggtgttccacgggcaccagctgctggagcccgtgtgggacctc
aagagccggctgtgccggaagcaccgcaagctccggcggctgtactgccgcaccgagggc
tgctgcgtgtgcggggcctgcctgctggaggagcacaagaaccacgacaccatcccgctg
gaggaggagcgggcgcacaaggaggtggaggttcggaaggtccaggccaacgtggagaac
cagatgctgatcatcacctctgacagccagaagcaccggggccaggtggcttttctctcg
aaattgatccagacaacgcgggaagaggtgaacgcctgcttctcagagatcatccaggag
atcaaacagatgcagatgaaggtgctggatttcgtggagaaagaggaggctgctgccctg
gggaagctgggtggctccatccagcagagtcacaaccggctcctgaagctcgagggggac
agcatctggctccgcagcctgctcgccaaccgcagtgaccagcagtttctgcaggagttg
cccaggctgaagcacttccctgcctgcatggagcccctgatgggtaccaactgtgaggag
aagcagagcttcctccagttgccagagaccttgacggagctccggacccggctggtggac
atgggtctcagcttcatcaaccagctcctcctgaagggcattaagatgaactcctatgag
gtgctgcccccagatgtggacaggaaaacccttctcaagtgttactgcaacctgaacttc
gaccccacgacggccagcgaggagctcttcctgttcaaggagacccactcggtgctgaac
ctgggcatcctcctggagcccttcgcggcgggcagcctcttcccgggcttcaagcagtgg
ccgcaggtgctgtgctcgcggggcctggccgagggccgccactactgggaggccgacgtg
tccaactcgtgggtgtgcctgggtgtcacctaccgccgcagccccccgctcggcggccgc
ccgcgccgcaacatcgtctacctgctgggccgcaacccctactcgtggtgcctggagtgg
gactcgctcaagttctccgtgtggcacaacaacacgcagacggtgctgcacggcggctac
caccgcacgctgggcgtggcgctcgactgcgcggccggctgcctctccttctacggcgtg
gcgggcggcgtgagcctcctctaccgcttcctcgcctccttcctggagccgctctacccc
gccgtcatggtcagcagcggcgcctcggtcacgctcaagcagcacccctccgaggcctag
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