Odocoileus virginianus (white-tailed deer): 110132493
Help
Entry
110132493 CDS
T10722
Symbol
TPM1
Name
(RefSeq) tropomyosin alpha-1 chain isoform X4
KO
K10373
tropomyosin 1
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr04260
Cardiac muscle contraction
ovr04261
Adrenergic signaling in cardiomyocytes
ovr04814
Motor proteins
ovr04820
Cytoskeleton in muscle cells
ovr05206
MicroRNAs in cancer
ovr05410
Hypertrophic cardiomyopathy
ovr05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
110132493 (TPM1)
04820 Cytoskeleton in muscle cells
110132493 (TPM1)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
110132493 (TPM1)
04261 Adrenergic signaling in cardiomyocytes
110132493 (TPM1)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
110132493 (TPM1)
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
110132493 (TPM1)
05414 Dilated cardiomyopathy
110132493 (TPM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ovr04812
]
110132493 (TPM1)
04147 Exosome [BR:
ovr04147
]
110132493 (TPM1)
Cytoskeleton proteins [BR:
ovr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
110132493 (TPM1)
Exosome [BR:
ovr04147
]
Exosomal proteins
Exosomal proteins of microglial cells
110132493 (TPM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
CLZ
Laminin_II
Crescentin
PUMA_CC
DUF745
ERM_helical
DUF3450
Laminin_I
ATG16
CENP-F_leu_zip
TMF_DNA_bd
NBP1
Lebercilin
DUF16
DUF1664
Fez1
DUF4200
XhlA
Motif
Other DBs
NCBI-GeneID:
110132493
NCBI-ProteinID:
XP_020741527
UniProt:
A0A6J0WUP3
LinkDB
All DBs
Position
6:complement(36089229..36119811)
Genome browser
AA seq
284 aa
AA seq
DB search
MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKATEDELDKY
SEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAE
ERAELSEGKCAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAE
FAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTSI
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggacgccatcaagaagaagatgcagatgctcaagctcgacaaggagaacgccttggat
cgagcggagcaggctgaggccgataagaaggcggcggaggacaggagcaagcagctggaa
gatgagctggtgtcgctgcaaaagaaactcaaggccaccgaagatgaactggacaaatac
tccgaggctctcaaagatgcccaggagaagctggagctggcggagaaaaaggccaccgac
gctgaagccgacgtagcttctctgaacaggcgcatccagctggttgaggaagagttggat
cgtgcccaggagcgtctggcaacagctctacagaagctagaggaggccgagaaggcagca
gatgagagtgagagaggcatgaaagtcattgagagccgagcccaaaaggatgaggagaaa
atggagattcaggagatccagctgaaagaggccaagcacattgctgaggatgccgaccgc
aagtatgaagaggtggcccgtaagctggtcatcattgagagtgacctggagcgtgcagag
gagcgggctgagctctcagaaggcaaatgtgccgagcttgaagaagagttgaaaactgtg
acgaacaacttgaaatcactggaggctcaggctgagaagtactcgcagaaagaagacaaa
tacgaggaagagatcaaggtcctttctgacaagctgaaggaggctgagactcgggctgag
tttgcggagaggtcagtaactaaattggagaaaagcattgatgacttggaagacgagctg
tacgctcagaaactgaagtacaaagccatcagcgaggagctggaccacgctctcaacgac
atgacttccatataa
DBGET
integrated database retrieval system
