Odocoileus virginianus (white-tailed deer): 110132824
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Entry
110132824 CDS
T10722
Symbol
CACNA1H
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H isoform X1
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr04010
MAPK signaling pathway
ovr04020
Calcium signaling pathway
ovr04713
Circadian entrainment
ovr04925
Aldosterone synthesis and secretion
ovr04927
Cortisol synthesis and secretion
ovr04929
GnRH secretion
ovr04934
Cushing syndrome
Brite
Ion channels [BR:
ovr04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
110132824 (CACNA1H)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
110132824
NCBI-ProteinID:
XP_070317051
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Position
33:928035..952720
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AA seq
2244 aa
AA seq
DB search
MLVIMLNCVTLGMFRPCEDVECRSERCGILEAFDDFIFAFFAVEMVIKMIALGLFGQKCY
LGDTWNRLDFFIVMAGMMEYSLDGHNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDT
LPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFLDSTFARNSNLSFLRPYYQPEEGEE
NPFICSSRRDNGMQKCSHIPSRRELRVECTLGWEAYGQPQAEGAGGTGHHTCINWNQYYN
VCRSGDSNPHNGAISFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIV
GSFFMINLCLVVIATQFSETKQRENQLMREQRARYLSNDSTLASFSEPGSCYEELLRYVG
HVCRKLKRRGLRLYARWQSRWRKKADPGSAGPGQGSGRRPRRAGGRPASIHHLVYHHHHH
HHHHYHFSHGSPRRPGPEPGAGDARLVRAGVPASPGRGPPDAESVHSVYHADCHVEGPQE
RARVAHAAATAAAGLKLAAGLGAMNYPTILPSATSSGKGGLGPKAKRPGGPPGAGGHSPL
RLSSPDPCEKIQHLVGEHGLGQAPSRLSGLSVPCPLPSPQAGTLTCELSSCPYCTSALED
PELEFSDSGSGDSDSNGVYEFTQDVRHGDHRDPMQSPPAAEAPGAGGTRRRGPRRAAAGE
QGGLGRIWASFSGKLRRIVDSKYFNRGIMVAILTNTLSMGVEYHEQPDELTNALEISNIV
FTSMFALEMLLKLLACGPLGYIRNPYNIFDGIIVVISVWEIIGQADGGLSVLRTFRLLRV
LKLVRFMPALRRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHLFGCKFSLKTDTGDTV
PDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSSWAALYFVALMTFGNYVLFNLLV
AILVEGFQAEGDATRSDTDEDKTSTHLEEDLDKFRDLRATEMKMYSLAVTPNGHLEGRGS
LPPPLIMRTAATPMPTPKSSPHLDAAPGPLDSRRGSSSSMDPQLGDQKSLSSLRSSPCAP
WGPNSAWSSRRSSWNSLGRAPSLKRRSQCGERESLLSGEGRGSGSTDEEAEDGRPGAGAS
SGTRATPLRRAESLDHRSTLDLRPPRPATLLPTKAHDCNGQVLALPSEFFLRIDSHKEDP
AEFDDDVEDSCCSRLQKVLEPHKPECCRSREPWALYLFSPQNRFRVSCQKIIAHKMFDHV
VLVFIFLNCITIALERPDIDPGSTERVFLSVSNYIFTAIFVAEMMVKVVALGLVSGEHAY
LQSSWNILDGVLVLVSLVDIVVAMASAGGAKILGILRVLRLLRTLRPLRVISRAPGLKLV
VETLISSLRPIGNIVLICCAFFIIFGILGVQLFKGKFYYCEGADTRNISTKAECRAAHYR
WVRRKYNFDNLGQALMSLFVLSSKDGWVNIMYDGLDAVGVDQQPVPNHNPWMLLYFISFL
LIVSFFVLNMFVGVVVENFHKCRQHQEAEEARRREEKRQRRLERKRRSTFPNPEAQRRPY
YADYSPTRRSIHTLCTSHYLDLFITFIIGVNVITMSMEHYNQPKALDEALKYCNYVFTIV
FVVEAVLKLVAFGFRRFFKDRWNQLDLAIVLLSIMGITLEEIEMNAALPINPTIIRIMRV
LRIARVLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGRLECSED
NPCEGLSRHATFSNFGMAFLTLFRVSTGDNWNGIMKDTLRECAREDKHCLTYLPAISPIY
FVTFVLVAQFVLVNVVVAVLMKHLEESNKEAREDAELDAELEMEMAQGSPARPRPAAPQS
PGASPDSPNVLVVRKVSVSRMLSLPNDSYMFRPVAPAAAAHPNPLQEVEMETYAGASGRV
ITAHSPPVEPCASLQVPSAVSSPARGGDTLCALPPRGAARSPSVSRLLCRQEAVRTESLE
GQVDGTGASSPYWGEPGGKTPVRQASLGPSMRSPPRSPRPASIRTRKHTSGQHCLSSRLP
APGGEETEAPDPADEEVSHITSSARSPSASPTARGMVGGEPDLHRLYSVDTRGFLDQPGR
VDEQRRPSGEPGIGDSRPEAGEAKPRALEAELALGARRKKKMSPPCISIEPPAEDEGAAR
APAAEGSSTTLRRRTPSCEAVPHRDPLEPADGAGLDAAAKGERRGQAPCRTEHLTVPNFA
FEPLDVGGPSGDLFTDGGHGAAPEPRPSLGTTAPPEPQETEPPVPSGDPPEEGWGLHLTV
PESPLKRVSPPAVPVPGDSVDEPV
NT seq
6735 nt
NT seq
+upstream
nt +downstream
nt
atgctggtcatcatgctcaactgcgtgaccctgggcatgttccggccctgcgaggacgtc
gagtgccgctcggagcgctgcggcatcctggaggcgtttgacgacttcatcttcgccttc
ttcgcggtggagatggtcatcaagatgatcgccctggggctgtttgggcagaagtgctac
ctgggagacacgtggaacaggctggacttcttcatcgtcatggcgggtatgatggagtac
tccttggacggacacaacgtgagcctctcggccatccgaacggtgcgagtgctgcggccc
cttcgtgccatcaaccgtgtgcccagcatgcggatcctggtcacgctgctgctggacaca
ctgcccatgctcggcaacgtcctcctgctctgcttctttgtcttcttcatcttcggcatc
gtgggcgtccagctttgggccggcctgctgcgcaaccgctgcttcctggacagcaccttc
gccaggaacagcaacctcagcttcctgcggccgtactaccagccggaggagggcgaggaa
aacccgttcatctgctcctctcgccgggacaacggcatgcagaagtgctcgcacatcccc
agccgccgcgagctgcgcgtggagtgcacgctgggctgggaggcctacgggcagccgcag
gccgagggcgccggtggcactggtcaccacacctgcatcaactggaaccagtactacaac
gtgtgccgttcgggcgactccaacccgcacaacggggccatcagcttcgacaatattggc
tacgcctggatcgccatcttccaggtgatcacgctggagggctgggtggacatcatgtac
tacgtcatggacgcccactccttctacaacttcatctacttcatcttgctcatcatcgtg
ggttccttcttcatgatcaacctgtgcctggtggtcatcgccacgcagttctcggagaca
aagcagcgggagaaccagctgatgcgggagcagcgggcccgttacctgtccaacgacagc
acgctggccagcttctccgagccgggcagctgctacgaggagctcctccggtacgtgggc
cacgtgtgccgcaagctaaagcgccgtggcctgcgcctctacgcccgctggcagagccgc
tggcgcaagaaggcggaccctggcagtgccgggcccggccagggctcagggcggcggccg
cggcgggcgggcgggcgccccgcctccatccaccatctcgtgtaccaccaccaccaccac
caccaccaccactaccacttcagccacggcagcccccgccggccaggccccgagccaggg
gccggcgatgccaggctggtgcgggccggagtgccagcctcacccgggcgcgggccccct
gacgccgaatcggtgcacagcgtgtaccacgctgactgccatgtggaggggccgcaggag
agggcccgcgtggcgcacgccgcggccactgctgccgccgggctcaagctggccgcgggg
ctgggagccatgaactaccccaccatcctgccctcggccacgagcagtggcaaaggcggc
ctcgggcccaaggcgaagcggcctggtggccccccgggagctggggggcacagccccctg
aggctgagcagcccggatccctgcgagaagatccagcacctggttggggagcatggactg
ggccaggcccccagccgcctgtcgggcctgagtgtgccgtgccctctgcccagcccccag
gcgggcacgctgacctgtgagctgagcagctgcccgtactgcaccagcgccctggaggac
cctgagctggagttcagtgactcgggcagtggagactcagacagcaacggggtctacgag
ttcacgcaggacgtgcggcacggggaccaccgcgaccccatgcagtcgccccccgcggca
gaggcaccaggcgcgggcggcacacggcggagggggccacggcgggcggcggcgggcgag
cagggcgggctgggccgcatctgggcctccttcagtggcaagctgcgccgcatcgtggac
agcaagtacttcaaccggggcatcatggtggccatcctcaccaacacgctgagcatgggc
gtcgagtaccacgagcagcctgacgagctgaccaacgccctggagatcagcaacatcgtg
ttcacaagcatgtttgccttggagatgctgttgaagctgctggcctgcggcccactgggc
tacatccggaacccctacaacatctttgatggcatcattgtggtcatcagcgtgtgggag
atcatcgggcaagcggacggcgggctgtcggtgctgcgcaccttccggctgctgcgggtg
ctcaagctggtgcgcttcatgcccgcgctgcggcgccagctggtggtgctcatgaagacc
atggacaacgtggccaccttctgcatgctgctcatgcttttcatctttatcttcagcatc
cttggcatgcatctcttcggctgcaaattcagcctgaaaacagataccggagacacagtc
cccgaccgaaagaactttgattccctgctgtgggccattgtcaccgtgtttcagatcctc
acccaggaggactggaatgtcgtcctgtacaacggcatggcctccacgtcctcctgggcc
gccctgtacttcgtggccctcatgacctttggcaactacgtgctcttcaacctgctggtg
gccatcctggtggagggtttccaggccgagggcgatgccaccaggtccgacacagatgaa
gacaagacatccacccacttggaggaagacttggacaagttccgagacctcagggctaca
gagatgaagatgtattcgctggcggtgacacccaacgggcacctggagggccggggcagc
ctgccccctccccttatcatgcgcacggcagccacgcccatgcccacccccaagagctcc
ccacacctggacgcggcccctgggcccctggactcgcgccgtggcagcagcagctccatg
gaccctcagctaggggaccagaaatctctgtctagcctccgaagctcgccctgtgccccc
tggggccccaacagtgcctggagcagccggcgctccagctggaacagcctgggccgcgca
cccagcctcaagcgcaggagccagtgtggggagcgagagtcgctgctctctggtgagggc
aggggcagcggcagcacggacgaggaagccgaggatggccggcccggggcgggggcctcg
tcgggcacacgggccacgccgctgcggcgcgccgagtccctggaccaccgcagcacgctg
gacctgcggcccccacggccggccaccctgctgcccaccaaggcccacgactgcaacggg
caggtgctggccctgcccagcgagttcttcctgcgcatcgacagccacaaggaggatccg
gccgagtttgacgacgacgtggaggacagctgctgctcacggctgcagaaggtgctggag
ccgcacaagccagagtgctgccggagccgcgagccctgggccctgtatctcttctccccg
cagaacaggttccgtgtctcctgccaaaagatcattgctcacaagatgttcgatcacgtc
gtcctcgtcttcatcttcctcaactgcatcaccattgccctggagagacccgacatcgac
cccggcagcaccgagcgcgttttcctcagcgtctccaactacatcttcacagcgatcttc
gtggcggagatgatggtgaaggtggtggccctgggcctcgtctcgggtgagcacgcctac
ctgcagagcagctggaacatactggacggggtcctggtcctggtgtccctggtggacatc
gtcgtggccatggcctcggctggcggcgccaagatcctgggcatcctgcgtgtgctgcgc
ctgctgcggaccctgcggccgctgagggtcatcagccgtgcgccgggcctcaagctggtg
gtggagactctgatatcgtccctcaggcccatcgggaacatcgtcctcatctgctgtgcc
ttcttcatcatcttcggcatcctcggggtgcagctcttcaaggggaagttttactactgc
gagggcgccgacaccaggaacatttccactaaggccgagtgcagggccgcacactaccgt
tgggtgcgacgcaagtacaacttcgacaacctgggccaggcgctgatgtcgctgttcgtg
ctctcgtccaaggacggctgggtgaacatcatgtacgacgggctggatgccgtgggcgtg
gaccagcagcccgtgcccaaccacaacccgtggatgctgctctacttcatctccttcctg
ctcatcgtcagcttcttcgtgctcaacatgttcgtgggcgtcgtggtggagaacttccac
aagtgccggcagcaccaggaggccgaggaggcgcggcggcgcgaggagaagcggcagcgt
cgcctggagaggaagcgcaggagcactttccccaacccagaggcccagcgccggccctac
tatgcggactactcgcccacccgccgctccatccacactctgtgcaccagccactacctg
gacctcttcatcaccttcatcatcggcgtcaacgtcatcaccatgtccatggagcactac
aaccagcccaaggctctggacgaggccctcaagtactgcaattacgtgttcaccatcgtc
tttgtcgtggaggccgtgctgaagttggtggcctttgggttccggaggttctttaaggac
aggtggaaccaactggacctggccatcgtcctgctgtccatcatgggcatcacgctggag
gagatagagatgaacgcggcactgcccatcaaccccaccatcatccgaatcatgcgtgtc
ctccgcatcgcccgcgtcctgaagctgctcaagatggccacgggcatgcgggccctgctg
gacacggtggtccaggcactgccccaggtagggaacctcggcctgcttttcatgctcctg
ttttttatctatgctgccctgggagtggagctgttcgggaggctcgaatgcagtgaggac
aacccctgcgagggcctgagcagacacgccaccttctctaacttcggcatggccttcctc
acgctgttccgcgtgtccaccggggacaactggaatgggatcatgaaggacacgctgcgc
gagtgcgcccgagaggacaagcactgcctcacctacctgccggccatctcgcccatctac
ttcgtcaccttcgtgctggtggcccagttcgtgctggtcaacgtggtggtggccgtgctc
atgaagcacctggaggagagcaataaggaggcccgcgaggacgccgagctggacgcggag
ctcgagatggagatggcgcaggggtcccctgcccggcccaggcccgcggccccgcagagc
cccggcgcctcgccagactcccccaatgtgctagtcgtgcgcaaggtgtcggtgtccagg
atgctctcgctgcccaacgacagctacatgttccggcccgtggcgcctgcggcagccgct
caccccaacccgctacaggaggtggagatggagacctacgcgggcgcttcgggccgggtc
atcaccgcccactcgccgcctgtggagccctgcgcctccctccaggtcccttcggctgtg
tcctccccggctaggggcggcgacaccctctgtgccctgcccccgcggggggcagcccgc
tcgcctagtgtcagccggctgctctgcagacaggaggccgtccgcacggagtccctggaa
gggcaggttgatggcactggggccagcagcccatactggggagagcccggtgggaaaacc
cccgtgaggcaggcatccctggggccctccatgcggtccccgccccggtccccgcggccc
gccagcatccgcacccgcaagcacacttctggacagcactgcctctccagccggctgccg
gccccaggcggggaggagaccgaggccccagacccagccgatgaggaggtcagccatatc
accagctctgcccgtagcccttcggcctcgcccactgcccgtgggatggtgggcggcgag
ccagatctgcacaggctctacagcgtggacacccggggcttcctggaccagccgggccgg
gtggacgagcagaggcgaccctcgggggagccgggcatcggagacagccgtccagaggcc
ggggaggcaaagccccgggccctggaggccgagctggccttgggggcgcgcaggaagaag
aagatgagccccccctgcatctccatagagccccccgcggaggacgagggtgcagccagg
gcccctgcggcagagggtagcagcaccaccctgcggcggcgaaccccatcctgtgaggct
gtgccccacagagaccccctggagcccgcagacggcgcagggctggacgctgctgccaag
ggggagcggcggggccaggccccctgccgcacagaacacctgactgtcccgaactttgcc
tttgagccgctggacgtggggggccccagtggggacctgttcacggatgggggacatggg
gctgccccagaacccagaccctccttgggcaccacagcccctcctgaaccccaggagacg
gagcccccagtgccctcaggagaccccccagaggaggggtggggtctgcacctcaccgtc
cctgagagccctctgaagagagtgtcccccccggctgtgccagtcccgggtgacagcgtg
gatgagcccgtgtag
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