Odocoileus virginianus (white-tailed deer): 110132958
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Entry
110132958 CDS
T10722
Symbol
TRIM38
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM38
KO
K12014
tripartite motif-containing protein 38 [EC:
2.3.2.27
]
Organism
ovr Odocoileus virginianus (white-tailed deer)
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ovr04121
]
110132958 (TRIM38)
Enzymes [BR:
ovr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110132958 (TRIM38)
Ubiquitin system [BR:
ovr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
110132958 (TRIM38)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-B_box
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
RING_XB3-XBAT31
zf-C3HC4_2
zf-RING_2
zf-RING_6
Trm112p
TMCO5
Fib_alpha
zf-RING_5
U-box
RDM
zf-RING_10
DUF1664
PsbQ
FapA
Motif
Other DBs
NCBI-GeneID:
110132958
NCBI-ProteinID:
XP_020742266
UniProt:
A0A6J0WX12
LinkDB
All DBs
Position
27:17475213..17490055
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AA seq
456 aa
AA seq
DB search
MASKKMREEATCSICLHLMTNAVSINCGHSYCQACIVSCYQMQPWQNTFSCPQCRAPFNM
ASLRPNKQLGNLIEVIKEMDQEMSCEEHGEKLHLFCEDEGQLICWLCDRGPQHKGHATVL
VEEACQGYKEKLQQAVTNLRQLGEECMNLQMFTAEQITKWNEKIEVQKQKIQSDFKTLQS
FLHEEEKSYLWKLEEEKEQTLRRLRDNKASLEQKNRELQNHILELENKCQGSAQKLLQDV
KDTLSRSWAVKLEQPEALSLDLHTVCNVSELYFDVKKMLRRHQVSVTLDPDTAHYELILS
EDGRQVTRGCPQEKLDNSSRRFSALPCILGCEGFTSGKHYFEVDVGEGTGWDLGVCMENV
QRDTIMLPTPQSGFWAIRRCKEGYVALTSPLTSIQLTEQPLVVGIFLDFEVGVVSFYNMT
TGSHIFTFPKASFSDTLRPYFQVYQYSPLFLPPPDE
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggcctcaaagaagatgagggaggaagccacctgctccatctgcctgcacctgatgact
aacgcagtgagcatcaactgtggacacagctactgccaagcgtgcatagtgagctgctac
cagatgcagccatggcagaatacattctcctgtccccagtgtcgagcaccatttaatatg
gcgagcctccgacccaacaagcagctgggaaatctcattgaagtcatcaaggagatggac
caggaaatgtcatgtgaggaacatggagagaagctccacctgttctgtgaagacgagggc
cagctcatctgctggctctgtgatcgtggaccacagcacaaagggcatgccacagttctg
gtggaagaagcatgccaaggctacaaggaaaagctccaacaagctgtgacaaacttgagg
caactgggagaggaatgtatgaacctgcagatgttcacggcagagcaaataaccaaatgg
aatgagaagatagaggttcagaaacaaaaaatccagtctgactttaagactctccagagc
ttccttcatgaggaagagaaatcttatctatggaaactggaggaagaaaaagagcaaact
ctgaggagactgagggacaataaggccagtcttgaacagaagaaccgtgaactccagaac
cacatcctggaactagagaataaatgtcagggctcagcccagaaattgcttcaggatgtg
aaagatactttgagcaggagttgggctgtgaagctagaacaaccagaggccctctctttg
gaccttcatactgtgtgcaatgtatcggagctttactttgatgtaaagaaaatgttaagg
agacatcaagtcagcgtgactctggatccagatacagctcattatgaactaattctgtct
gaggatgggagacaagtgactcgtggatgccctcaggagaagcttgataattcttctagg
agatttagtgccttgccctgtatcctgggctgtgaaggcttcacttcagggaaacattac
tttgaagtagatgtgggagaaggaactgggtgggatttaggagtctgtatggaaaatgtt
cagagggacactatcatgctgccgacgcctcagtctggattctgggccatcagacggtgc
aaggaaggctatgtagctcttacttctcccctaacttccattcaactgacagagcagccc
ctggttgtggggatttttctggactttgaagttggagttgtgtccttttacaatatgacc
actggctctcacatcttcaccttcccaaaggcctccttctctgacactctccggccctat
ttccaggtctatcagtattctcctttgttcctgcctcccccagatgagtaa
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