KEGG   Odocoileus virginianus (white-tailed deer): 110133061
Entry
110133061         CDS       T10722                                 
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
ovr  Odocoileus virginianus (white-tailed deer)
Pathway
ovr03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ovr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    110133061
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ovr03021]
    110133061
   03036 Chromosome and associated proteins [BR:ovr03036]
    110133061
Transcription machinery [BR:ovr03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     110133061
   Coactivators
    SAGA/TFTC/STAGA complex
     110133061
Chromosome and associated proteins [BR:ovr03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     110133061
    STAGA complex
     110133061
    TFTC complex
     110133061
    SAGA complex
     110133061
    SLIK complex
     110133061
SSDB
Motif
Pfam: WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_Prp19 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd WD40_CDC20-Fz WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 TFIID_NTD2 Beta-prop_TEP1_2nd EIF3I WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_1st CFAP251_N Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_WDR41 ANAPC4_WD40 Beta-prop_Aladin WDR90_beta-prop_4th DSE1_N Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_SCAP PAC11 NBCH_WD40 Beta-prop_RIG_2nd WD40_RFWD3 ASA1 Beta-prop_SPT8 Beta-prop_VPS8 Beta-prop_HPS5 Beta-prop_NOL10_N Beta-prop_DCAF4 RMC1_N Beta-prop_WDR75_2nd Tricorn_2nd PEP5_VPS11_N Beta-prop_WDR19_1st Beta-prop_Vps41 eIF2A Beta-prop_NWD2_C TRM82_WD WDR54 Ge1_WD40 Beta-prop_WDR35_TULP_N Beta-prop_ACSF4 Beta-prop_DCAF12 YfmQ
Other DBs
NCBI-GeneID: 110133061
NCBI-ProteinID: XP_070318714
UniProt: A0ABM4HT55
LinkDB
Position
Unknown
AA seq 586 aa
MERSPTDQMQTAVSGYLKRRQYWGNDGPPKKIRRLSQNIQDMAASLAVQSESGCANTVSV
APGQAEPQQYEVQFGRLRNFLTDSDSQHSHEVMPLLYPLFVYLHLNLVQNSPKSTVESFY
SRFHGMFLQNASQKDVIEQLQATQTSQDIMSNFQLRAFLDSKYVVRLSEDSYNYLLHYLH
SDNNTALFRVLTCHIHLDVQPAERMDSQLYASSDPSSGEGSGLESTDLPKYILQKEEELD
ILQETIKCVQDGPPSLITIYSYAFYNTAQQLNTAEASPDSKLLAAGFDNSCIKLWSLTSK
KFKPNPHQVDASRIDLTYDIPEDDDEDKAAKELKVLRGHCGPVYGTRFLPDSSALLSCSE
DTSIRYWDLGSFTNTVRYQGHAYPVWDLDISPHNLFFASASRDRTAKLWSFDRTYPLRIY
AGHLADVDCVRFHPNSNYLATGSTDKTVRLWSTQQGNLVRLFTGHHGTVRSLAFSPNGKY
LVSAGEDQLLKLWDLASGTLYKELQGHTDDITSVTFNPDSSLIASASMDNSVRIWDINKQ
SSTPADGSSSELLGVYTSQMNTVLNVQFMTCNLLLVTGIREEKQEH
NT seq 1761 nt   +upstreamnt  +downstreamnt
atggaacggtcccccaccgaccagatgcagaccgccgtgtccggctacctcaaacgccgg
cagtactggggcaacgatggcccaccgaagaaaatccggcgactgtcacagaacatccag
gatatggctgccagcctcgcagtccagtcagaatctggttgtgccaacacagtgtctgta
gcccctggccaggcagagccccagcagtatgaagtacagttcggacggctgcggaatttt
ctcaccgattctgactcccagcacagccacgaagtgatgcctctcctctaccctctcttt
gtctacctccatctcaacctggtccagaacagtccgaagagcacagtggaaagcttttac
agccgcttccatggaatgtttctgcagaacgccagccagaaggacgtcatcgagcagctc
caggccacccagaccagccaagacatcatgtctaacttccagctgcgggccttcctggac
agtaagtacgtggttcgtctgtcagaagacagctacaactaccttctccactacctccat
agtgacaacaacaccgcgctgttcagagtcctcacctgtcacatccacctggacgtgcag
cctgccgagaggatggactcccagctctacgccagcagcgacccctccagtggtgagggc
agcggcctggagtccaccgacctgcccaagtacatcctgcagaaggaagaggagctggac
atccttcaggagaccatcaagtgcgtccaggatggccccccctccctcatcaccatctac
tcctacgccttctacaacactgcgcagcagctgaatacggcggaggcctccccggacagc
aagctgctcgccgcgggctttgacaactcctgtataaaactgtggagtctgacttccaag
aagtttaaacccaacccccatcaagtagacgcgtcccgcatcgacttgacttatgatatc
cccgaggacgacgatgaggacaaggcagccaaggagctgaaggtcctgcggggacactgc
gggccagtgtacggcaccaggttcctcccggacagctctgcgctgctctcctgctctgaa
gacacgtccatcaggtactgggacctgggcagcttcaccaataccgtgcggtaccagggc
cacgcctaccccgtgtgggacctggacatcagcccgcacaacctgttctttgccagtgca
tcccgtgaccgcacggcgaagctgtggtcgtttgatcgtacgtacccactgcgaatctat
gccgggcacctggcggatgtggactgcgtcaggttccaccccaattcaaactatttagcc
acgggctcgacagacaagacggtgcggctgtggagcacccagcaggggaacttggtgagg
ctcttcaccggccaccacggcaccgtgcgctccctggccttttcccccaacggtaagtac
ctggtgtcggcgggcgaagaccagctgctgaagctgtgggacctggcgtctgggaccctt
tacaaagagctacagggccacacggatgacatcaccagtgtcaccttcaacccggacagc
agcctgatcgcgtcagcatccatggataactcagtgcgtatctgggacatcaacaagcaa
agcagcacgcccgccgatggctcgtccagtgagctcctaggcgtttacaccagccagatg
aacactgtgctgaatgtgcagttcatgacctgcaacctcctgctggtgactggaatcaga
gaagaaaagcaggaacactga

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