Odocoileus virginianus (white-tailed deer): 110134026
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Entry
110134026 CDS
T10722
Symbol
SMC1B
Name
(RefSeq) structural maintenance of chromosomes protein 1B
KO
K06636
structural maintenance of chromosome 1
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr04110
Cell cycle
ovr04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
110134026 (SMC1B)
04114 Oocyte meiosis
110134026 (SMC1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ovr03036
]
110134026 (SMC1B)
Chromosome and associated proteins [BR:
ovr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
110134026 (SMC1B)
Meiosis-specific proteins
Cohesin complex and associated proteins
110134026 (SMC1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
Ca_chan_IQ
Motif
Other DBs
NCBI-GeneID:
110134026
NCBI-ProteinID:
XP_020743947
UniProt:
A0A6J0X1V3
LinkDB
All DBs
Position
23:complement(12363064..12439109)
Genome browser
AA seq
1235 aa
AA seq
DB search
MGRLEVLLVENFKSWRGRQVIGPFKRFTCIIGPNGSGKSNVMDALSFVMGEKIANLRVKN
IQELIHGAHIGKPVSSSASVKIVYLEESGEEKTFARTIRGGCSEYCFNDNPVSRSAYITE
LEKIGIIVKARNCLVFQGTVESISMKKPKERTQFFEEISSSGELIGEYEEKKRKLQKAEE
DAQFNFNKKKNVAAERKHAKLEKEEADRYQNLLEELKINKIQLQLFRLYHNEKKINFLYT
ELERVNKNLSVTKESLSHHENIVKAKKKEHGMLSRQLQQTEKELKSLEALLNQKRPQYIK
AKENTSHHIKKLDGAKKSIKDSEKQCSKQEDDIKALETELVDLDGAWRSFEKQIEEEMLH
KGRDIELEAGQLVQYKELKEQVRKKVAIMTQQLEKLQWEQRSDEERWAFEKRRHGEVQEN
IKQIKEQIEDHKKRIEKLEEYIKTCTNCLKEKKEQEENLVNEIEKTKSRMSEVNEELNLI
RSELQNAGIDTHEGKRQQKRAEILEHLKRLYPDSVFGRLLDLCHPIHKKYQLAVTKLFGR
YMVAIVVASEKVAKDCIRFLKEERAEPETFLALDYLDIKPINERLREIKGCKMVIDVIKT
QFPQLKKVIQFVCGNGLVCETLEEARHIAFAGPERRKTVALDGTLFLKSGVISGGSSDLK
SKARCWDEKELKNLRDRRTQLIQELKDLMKIVRKEADLKQIQALIQGTTTRLKYAQSELE
IIKKKHLAALHREQSQLQSELLNIESQCAMLSEGIKERQQRIKEFQRKIDKVEDDIFQHF
CEEIGVENIREFENKHIKQQQEADQKRLEFEKQKTRLNIQLEYSRNQLKKKLNKINTLKE
TIQKGREDIDNLKKVEENCLKIVDELMEKQQQLKDEFVAQNTNVEKAQAQIEEERKKFLA
VDREVGKWQKEVVILQSSLEQNRLEKHNMLLDCKVQDIEIVLLLGSLDDIIEVELGTEAE
STQATTDIYEKEAAIEVDYSSLREDLKALQSDKEIEAQLRLLLQQVASQEDILLKTAAPN
LRAMENLKTVRDKFQESTDAFEASRKEARICRQEFEQVKKRRYDLFNQCFEHISISIDQI
YKKLCRNNSAQAFLSPENPEEPYLEGISYNCVAPGKRFMPMDNLSGGEKCVAALALLFAV
HSFRPAPFFVLDEVDAALDNTNIGKVSSYIKEQTQEQFQMIIISLKEEFYSKADALIGIY
SEHDDCMFSRVLTLDLSQYPDTEGRESSRRQRKSL
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atggggcgtttggaagtgctgcttgtggagaactttaagtcgtggcggggccgccaggtc
ataggccccttcaagaggttcacctgcatcatcggccccaacggctccgggaaatctaat
gtaatggatgcacttagttttgtaatgggagaaaaaatagctaatttaagagtgaaaaat
attcaagaacttattcatggagcacacattggaaaacctgtttcttcttctgcaagtgta
aaaattgtatatttggaagaaagtggagaagagaagacatttgcaaggactatccgagga
ggatgctcagaatattgttttaatgataatcctgttagtcgttctgcttatatcacagag
ctggaaaagataggcataatagtcaaagcacggaactgtctggtttttcagggaactgtg
gagtcaatttcaatgaaaaaacccaaagaaagaacccagttttttgaggaaatcagcagt
tcaggagagcttataggagaatatgaggaaaagaaaagaaagttacagaaagccgaagaa
gatgcacaatttaattttaataagaaaaaaaatgtagctgcagagcgcaaacatgcgaaa
ttagagaaagaagaggcagaccgttaccagaatctccttgaagaactgaaaattaacaag
atacaactgcagcttttcagactgtatcacaatgagaaaaaaattaattttttatatact
gagttagagcgtgtgaataagaatttgagtgtcacaaaagagtctctttctcatcatgaa
aatatagttaaagccaagaaaaaggaacatggaatgttgagcagacaactacaacaaaca
gaaaaagaattaaaatctcttgaagcactgttaaatcagaagaggcctcaatacattaaa
gctaaagaaaatacttctcaccacatcaagaaattagatggggctaaaaaatcaataaag
gacagtgaaaaacaatgttctaaacaggaggatgacataaaagccttagagacagagctg
gttgatttagatggtgcatggagaagttttgaaaagcagattgaggaagaaatgttacat
aaagggcgagacattgaactagaagctggtcagctggttcagtataaagaacttaaggaa
caagtaagaaagaaagtggctataatgacccaacagttggaaaagctgcagtgggaacag
aggtctgatgaagaaagatgggcatttgaaaagaggagacatggtgaagttcaggaaaat
ataaaacaaataaaggaacaaatagaagatcataaaaagcgaatagagaagttggaggag
tatataaaaacatgcacgaattgcttgaaagaaaaaaaagagcaggaggaaaacttagtg
aatgaaatagaaaaaacaaaatcaagaatgtctgaagttaatgaagagctgaatcttatt
agaagtgaattgcagaatgctggaattgatacccatgaaggaaaacgtcagcaaaagaga
gcagagattctggaacaccttaagagactttacccagattcagtgtttggaagactactt
gacctgtgtcatcctattcataagaaataccagctggctgttactaaactttttggtcgg
tacatggttgccattgttgtagcctctgaaaaggtagcaaaagattgtattcgatttctg
aaggaggaaagagctgaacctgagacattccttgcactagattaccttgatatcaaacca
atcaatgaaagattaagggagattaaaggctgtaaaatggtgattgatgtcataaagact
cagtttcctcagctgaagaaagtaattcagtttgtgtgtggaaatggccttgtctgtgag
actctggaagaagcaaggcatattgccttcgctggacctgaaagacggaaaacagtagct
cttgatggaacattatttttaaaatctggagtgatctctggagggtcaagtgacttaaaa
tccaaggctagatgctgggatgagaaagagttaaagaatttaagagacaggaggacccaa
ctaatccaagaattaaaggatttaatgaagatagtgcgcaaggaagcagatttgaaacaa
atacaggctctaatacaaggaactactacacgactcaaatatgcacaaagcgaactagaa
atcattaaaaagaagcaccttgctgctcttcaccgggaacaatctcagctacaaagtgaa
ctactaaatattgaatctcaatgtgccatgttgagtgaaggaatcaaagaacgacaacaa
agaattaaagaatttcaacgaaaaatagataaggttgaagatgatatttttcaacacttc
tgtgaagaaatcggcgtagaaaatattcgtgaatttgagaacaagcatattaaacagcaa
caggaagctgatcaaaaaagattagaatttgagaaacaaaaaactcggcttaatatccaa
cttgaatatagtcgcaatcagctgaagaagaaactgaataagataaacacattaaaagaa
actatccagaaaggtagagaagacattgataacctaaagaaggttgaagaaaattgtctg
aaaattgtggatgaactcatggaaaaacagcagcagcttaaggatgaatttgtcgctcag
aataccaatgttgagaaagcccaagctcaaattgaagaggaacgaaagaagtttttggcc
gttgatagggaagtgggaaaatggcaaaaagaagttgtgatccttcagagttctctggaa
cagaatcgattagagaagcataacatgttgcttgactgcaaagttcaagacattgaaata
gttcttttgttggggtcactggatgacatcattgaagtggagttgggaactgaagcagaa
agcacccaggcaacgactgatatatatgagaaagaagcagccattgaggtggactacagc
tctctaagagaggatttgaaggctctacaatctgataaagaaattgaggcccaacttaga
ctcctcctacaacaagtagcatcccaagaagatatcctgttgaagacagcagccccaaac
ctaagagccatggagaacctgaagactgtcagagacaagtttcaggagtccacagatgct
tttgaggccagcagaaaggaagccagaatatgtaggcaagagtttgaacaggtgaaaaaa
aggagatacgatcttttcaaccagtgttttgagcacatctcaatctcaattgatcaaatc
tacaagaagctctgcagaaacaacagtgcccaagcatttcttagcccagagaacccagaa
gagccttacttggagggaattagctataactgtgtggccccaggcaaacggttcatgccg
atggataacttgtcagggggagagaagtgcgtggccgcgttggcactcctgtttgctgtg
cacagttttcggcctgctccattctttgttttagatgaagtagatgcagccctggacaat
actaacattggcaaagtgtcaagttacattaaagagcagactcaggaacagtttcagatg
ataatcatttccctgaaagaggagttctattccaaagctgatgcactgataggcatctat
tcagagcacgatgactgcatgttcagccgagttttgaccctagatctttctcagtatcca
gatactgaaggcagagaaagcagcaggagacagcgcaagtccctgtag
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