Odocoileus virginianus (white-tailed deer): 110134160
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Entry
110134160 CDS
T10722
Symbol
SNAPC4
Name
(RefSeq) snRNA-activating protein complex subunit 4 isoform X1
KO
K09453
snRNA-activating protein complex subunit 4
Organism
ovr Odocoileus virginianus (white-tailed deer)
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ovr03000
]
110134160 (SNAPC4)
03021 Transcription machinery [BR:
ovr03021
]
110134160 (SNAPC4)
Transcription factors [BR:
ovr03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
110134160 (SNAPC4)
Transcription machinery [BR:
ovr03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
snRNA-activating protein complex (SNAPc)
110134160 (SNAPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
HTH_CHD1_Hrp3
Myb_DNA-binding_2
Motif
Other DBs
NCBI-GeneID:
110134160
NCBI-ProteinID:
XP_070311423
UniProt:
A0ABM4H771
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All DBs
Position
2:complement(98912850..98935221)
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AA seq
1346 aa
AA seq
DB search
MCCRRGIMDVDAERERISREIQQLERILEPCCSSLSVDVSESSLDSDSDADSLPDEDSDS
DAAGPLLSEEERWGEASNDEDDPKEKALPEDPETCLQLNMVYQEVVREKLAEVSLLLAQN
REQQEEIMGDLEGVRGPKVKDGRSPPPNLYLGHFMKPYFRDRVTGVGPPANEDTREKAAQ
GIKAFEELLVTKWKTWERVLLRKSVVSDRLQRLLQPKLLKLEYLQKKQNRAASELERQVL
EKQAREAEKEVQDINQLPEEALLGDRLDGHDWDKISNVNFEGGRSTEEIRKFWQNYEHPS
INKQEWSEQEVAQLKAVAAKHGHLDWQRIAEELGTRRSAFQCLQQYQQHNPALKRKEWTE
EEDRVLTRLVQAMRVGSHIPYRRIVYYMEGRDSMQLIYRWTKSLDPGLKKGLWAPEEDAK
LLQAVAKYGEQDWFKIREEVPGRSDAQCRDRYIRRLHFSLKKGRWNPKEVEKLIELIEKY
GVGRWAKIASELPHRSGSQCLSKWKIMVRQRQRQAQRRAPRRAHWSPSSGSSSDSSWEDS
EPEAAPKDAPEEAPAGSPEPPPAPYTVPDMDLWVPARQNPEELWGAGPGGCPRPPEGPDM
APAMAPAPAGQLASRRRSTNPRSIRCLCPAIAQRWSSEGPLGKQERPGSAPGPSPGSSSR
DEARPRVRPPWARTMQQRQGHALQWRLLEHKLLTAVSPWVGEVDLLCVRPRPAVRPRRAD
GIRRQLQGTHLASTPVFALFIQLFQIDTPGCVEVVRERKAWPPALLQAGAWDPPPPQEPS
SAHSDPGCLTQSVPAQGAAKQGTYPEVGRGTQACRTASMPPAPAPAPCRPRPKPKTVSEL
LREKRLREARARRAAQGPAILPARVLVSSPMVLQPLAPPAAPVPSVMLSRPGGPPVTSST
ASGSWVPAKDEQAPTLHAFALGPATSRAPGLVPASCPLSALGQSQTPATSRKQGLPEVPP
FLPAAPSPVQLPIQSLSLMPALGTPTAAGSSLPVTWVLTAQGLLPVPLQAVVSLPTPTGA
PDPTRLSVTLPPSPTETPASRGPRFPEQSRPGPPAASIDSEPEPPCRTASLSKSPTEVAE
AGGLAGLASPGEVLAAGETSAPTTPSQETPLAHHPVTRPPSSSPPPLHGAPGAASGPGEP
RPLDPEEPPLSWLGLENEALDLSLLSQESEAAAREWLWGQRGVTAPTPGSRLAYQPPMLC
SLRALSSLLLRKKDLEHGAAVLAPGGPAGALQASLGRVRERLCDSPAYLLLRARFLAAFT
LPALLATLSPRGVPTTLSVSTGPDPETDSDQLDPEEPELIDSDGDPTQGAPDPGQGSAPS
CPDSPDNPDVLQTRRLRPVRKRRRLQ
NT seq
4041 nt
NT seq
+upstream
nt +downstream
nt
atgtgttgcaggcggggcatcatggacgtggatgctgagagagaaaggatctccagggaa
atccagcagctggagaggatcttggaaccctgctgctcgagcctcagcgtggatgtctcg
gagtccagtcttgactcggattcggatgcagattcactgcccgacgaggactcggactca
gacgccgctggcccactgctgtcggaggaagagaggtggggtgaggccagcaacgacgag
gacgaccccaaggagaaggcgctccctgaagacccagagacctgcctgcagctgaacatg
gtctatcaggaggtggtccgggagaagctggcggaggtcagcctgctcctggcccagaac
cgggagcagcaggaggaaatcatgggcgacctcgaaggtgtcaggggccccaaggtgaag
gacggcaggagcccgcccccaaacctatacctcggacacttcatgaagccctacttcagg
gacagggtcacgggagtggggcctcctgccaacgaggacacgcgcgagaaggctgcccag
ggcatcaaggctttcgaggagctcctggtgaccaagtggaagacctgggaaagggtcctg
ctcaggaagtcggtggtgagtgaccgtctgcagcggctgctccagcccaagttgctcaag
ctggagtacttgcagaagaagcagaacagggccgcgagcgagctggagaggcaggtcctg
gagaagcaggccagggaggcggagaaggaggtgcaggacatcaatcagctcccggaggag
gccctgctaggcgacaggctggacggccatgactgggacaagatctccaacgtcaatttc
gagggaggccgcagcacggaggagattcgcaagttctggcagaactacgagcacccgagc
atcaacaagcaggagtggagcgagcaggaggtggcccagctgaaggccgtcgcggccaag
cacggccacctggactggcagaggatcgccgaggagctggggacacgccgcagcgccttc
cagtgcctgcagcagtaccagcagcacaacccagccctgaagcgcaaggagtggacggag
gaggaggaccgcgtactcacgcggctcgtgcaggccatgcgcgttggcagccacatcccc
taccggaggattgtctactacatggaggggcgggactccatgcagctcatctaccgctgg
accaagagcctggaccccggcctgaagaaggggctctgggccccagaggaggacgcgaag
ttgctgcaagcagttgccaagtatggggagcaagattggtttaaaatccgggaagaggtg
ccaggtaggagcgatgcccagtgccgagatcgatatatcagaaggttacatttcagcttg
aaaaagggacgatggaatcctaaagaggtggagaagttaattgaattgatagaaaaatac
ggtgtcggtcgctgggcaaaaatagcctctgagctaccccatcggtcaggctcccagtgc
ctgagcaaatggaagatcatggtcaggcagcggcagcggcaggcccagcggcgggcccct
cgcagggcgcactggagccccagcagcgggagcagcagtgacagcagctgggaggactca
gagcccgaggcggccccgaaggacgccccggaggaggccccggcgggcagcccggagcca
ccgccagctccgtacactgtgccggacatggacctgtgggtgcccgcccggcagaacccc
gaggagctgtggggagcaggccctgggggctgcccacgccctcctgagggccccgacatg
gccccggccatggccccggcccccgcagggcagctggcctccaggaggcggagcaccaac
ccaaggagcatcaggtgcctctgcccagccatcgctcagcgctggagctccgaggggccg
ctgggcaagcaggagaggcctggctcagccccgggacccagccctggcagcagcagcagg
gacgaggccaggccccgcgtgcggccaccatgggccaggaccatgcagcagcgccagggg
cacgctctgcagtggaggctcctggagcacaagctgctgacggccgtgagtccgtgggtg
ggagaggtcgacctgctgtgcgtgcgcccaaggcccgccgtgcggccgcgtcgagctgat
ggcatcaggagacagctgcagggcacccacttggccagcaccccagtgttcgccctcttc
attcagctgttccagattgacacgcctggctgtgtggaggtggttcgagagaggaaggcc
tggccgcctgccctgctccaggctggggcctgggacccgccgcccccgcaggaaccctcg
agtgcccacagcgacccaggctgcctcacccagagcgtgccggcccaaggggccgcaaag
cagggcacctaccctgaggtgggcagagggacgcaggcctgccgcacagcgtccatgccc
ccagcacccgccccggccccgtgcagaccccggcccaagcccaagacggtgtctgagctg
cttcgggagaagcgtctgcgggaggcccgagccaggagggccgcgcagggccccgccatc
ctcccggcccgcgtgcttgtctcctcgcccatggtcctccagccgctggcccccccagct
gccccagtccccagcgtcatgctatccaggcctggaggccctccggtgaccagttccact
gcttcaggctcctgggtgccagccaaggatgagcaagccccgactctgcacgcctttgcc
ctcggcccggccacctccagggcccccggtctggttcctgcgagctgcccgctgagtgct
cttggacagtctcagacccctgccacgtcccggaagcagggcctgcccgaagtgcccccc
tttctgcccgcagcccccagccctgtccagctgcccatccagtccctcagcctgatgcca
gcgctgggcacgcccacggcagccggcagctctctgcctgtcacctgggttctcacagca
caggggctgctccccgtacccctgcaggccgtggtgagcctgccaacgccgacgggggct
cctgaccccacacggctgtcggtgaccctgccgccctcgcccactgagaccccagccagc
cggggccccaggttcccagagcagagccgtcctgggccgccagcagccagcatagactcg
gagccagagcctccctgcaggacggcgtccttgagcaagagccccacagaggtggccgag
gccggtggccttgcgggactcgcctcccctggggaggtcctggcggctggggagacgtct
gcacccacgaccccctcccaggaaacacccctggcccaccacccggtgaccaggccccct
agctccagcccaccgcctctgcacggggccccaggggctgcctcagggcctggggagccc
cggcctctggacccggaggagcccccgctctcctggctggggctggagaatgaagccctg
gacttgagcctcctttcccaggagagcgaggccgctgcgcgggagtggctatgggggcag
cgaggggtgaccgcacccaccccggggagccggctggcctaccagccacccatgctgtgc
agcctgcgggcgctgtccagcctcctgctgcgcaagaaggacttggagcacggggccgcg
gtcctggcgcccggcgggccggccggcgccctgcaggcctcgctggggcgggtgcgcgag
cggctctgcgacagcccggcctacctgctgctgcgggcgcgcttcctggccgccttcacc
ctgccagcgctcctggccaccctgtccccccgcggcgtccccaccaccctgtcggtgagc
accgggcctgaccccgagacagacagtgaccaacttgacccggaggagccagagctcatc
gacagtgacggggaccccacccagggagccccggaccccggccagggctctgccccttcc
tgcccggacagccccgacaacccagacgtgctgcagacacggcgcttgaggcccgtccgc
aagcggcggcggctgcagtga
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