Odocoileus virginianus (white-tailed deer): 110134191
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Entry
110134191 CDS
T10722
Symbol
CACNA1B
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B isoform X1
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr04010
MAPK signaling pathway
ovr04020
Calcium signaling pathway
ovr04721
Synaptic vesicle cycle
ovr04723
Retrograde endocannabinoid signaling
ovr04725
Cholinergic synapse
ovr04726
Serotonergic synapse
ovr04727
GABAergic synapse
ovr04728
Dopaminergic synapse
ovr04930
Type II diabetes mellitus
ovr05016
Huntington disease
ovr05020
Prion disease
ovr05022
Pathways of neurodegeneration - multiple diseases
ovr05032
Morphine addiction
ovr05033
Nicotine addiction
ovr05207
Chemical carcinogenesis - receptor activation
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
110134191 (CACNA1B)
04020 Calcium signaling pathway
110134191 (CACNA1B)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
110134191 (CACNA1B)
04725 Cholinergic synapse
110134191 (CACNA1B)
04728 Dopaminergic synapse
110134191 (CACNA1B)
04726 Serotonergic synapse
110134191 (CACNA1B)
04723 Retrograde endocannabinoid signaling
110134191 (CACNA1B)
04721 Synaptic vesicle cycle
110134191 (CACNA1B)
09160 Human Diseases
09161 Cancer: overview
05207 Chemical carcinogenesis - receptor activation
110134191 (CACNA1B)
09164 Neurodegenerative disease
05016 Huntington disease
110134191 (CACNA1B)
05020 Prion disease
110134191 (CACNA1B)
05022 Pathways of neurodegeneration - multiple diseases
110134191 (CACNA1B)
09165 Substance dependence
05032 Morphine addiction
110134191 (CACNA1B)
05033 Nicotine addiction
110134191 (CACNA1B)
09167 Endocrine and metabolic disease
04930 Type II diabetes mellitus
110134191 (CACNA1B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ovr04040
]
110134191 (CACNA1B)
Ion channels [BR:
ovr04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
110134191 (CACNA1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
110134191
NCBI-ProteinID:
XP_070312875
LinkDB
All DBs
Position
2:101787501..101990801
Genome browser
AA seq
2354 aa
AA seq
DB search
MVRFGDELGGRYGGPGGGERARGGGAGGAGGPGPGGLQPGQRVLYKQSIAQRARTMALYN
PIPVKQNCFTVNRSLFVFSEDNVVRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPD
GDKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFVLHKGSYLRNGWNVMDFVVVLTGILA
TAGTDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAII
GLEFYMGKFHKACFPNSTDADPVGDFPCGREAPARLCEGDTECREYWAGPNFGITNFDNI
LFAILTVFQCITMEGWTDILYNTNDAAGNTWNWLYFLPLIIIGSFFMLNLVLGVLSGEFA
KERERVENRRAFLKLRRQQQIERELNGYLEWIFKAEEVMLAEEDKNAEEKSPLDVLKRAA
TKKSRNDLIHAEEGEDRFVDLCAVGSPFARASLKSGKTDSSSYFRRKEKMFRFFIRRLVK
AQSFYWVVLCVVALNTLCVAMVHYHQPQRLTTALYFAEFVFLGLFLTEMSLKMYGLGPRS
YFRSSFNCFDFGVIVGSIFEVVWAAIKPGTSFGISVLRALRLLRIFKVTKYWSSLRNLVV
SLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFQDETPTTNFDTFPAAILTVFQIL
TGEDWNAVMYHGIESQGGVSKGMFSSVYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTK
DEEEMEEAANQKLALQKAKEVAEVSPMSAANISIAAFVKQTRGTVSRSSSVSSVNSPQQN
SAKARSVWEQRASQLRLQNLRASCEALYSEMDPEERLRFATSRHLRPDMKTHLDRPLVVE
PGRDGARGPAGGKVRPEGGEAGEGTDPPRRHHRHRDRDRDKAAAPAGEPDRADAPKAEGG
DPGAREERARPRRSRSKEAAGPREARSERGRGLGPDGGRRHHRRGSPEEAAEREPRRHRA
HRHAPEPSREGAPGSKGERRARHRGGARAGPREAESGEEPARRHRARHKAPPAHEEAEKE
AEAEDRDRDKEPRNHQPRESHCDLEATVVIGVGPVHALPSTCLEKVEEQPEDADNQRNVT
RMGSQPSDLSTTVHIPVTLTGPPGETTVAPSGNVDLESQAEGKKEVEADDVMRSGPRPIV
PYSSMFCLSPTNLLRRFCHYIVTMRYFEMVILVVIALSSIALAAEDPVQTDSPRNNVLKY
MDYIFTGVFTFEMVIKMIDLGLLLHPGAYFRDLWNILDFIVVSGALVAFAFSGSKGKDIS
TIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFK
GKFFYCTDESKELERDCRGQYLDYEKEEVEAQPRQWKKYDFHYDNVLWALLTLFTVSTGE
GWPMVLKHSVDATYEEQGPSPGYRMELSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDK
VMSECSLEKNERACIDFAISAKPLTRYMPQNKQSFQYKTWTFVVSPPFEYFIMAMIALNT
VVLMMKFYDAPYEYELMLKCLNIVFTSMFSMECVLKIIAFGVLNYFRDAWNVFDFVTVLG
SITDILVTEIANNFINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIA
MLFFIYAIIGMQVFGNIALDDDTSINRHNNFRTFLQALMLLFRSATGEAWHEIMLSCLSS
RACDELANATECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLD
EFIRVWAEYDPAACGRISYNDMFEMLKHMSPPLGLGKKCPARVAYKRLVRMNMPISNDDM
TVHFTSTLMALIRTALEIKLAPAGTKQHQCDAELRKEISSVWANLPQKTLDLLVPPHKPD
EMTVGKVYAALMIFDFYKQNKTTRDQIHQAPGGLAQMGPVSLFHPLKATLEQTQPAVLRG
ARVFLRQKSSASLSNGGAVQTQEGGIKESVSWGTQRTQEVPCEVRTPLERGHSTEIPVVQ
TGKPAVDVQMQSMALRGPDGEPQPGLESQGRAASMPRLAAETQPPPDASPMKRSISTLAP
QRPHVAHLCNVALDRAPASQAAPHHHHRCHRRRDRKQKSLEKGPSLSADTDGAPYSTAGP
GPPPPPGDGAAGCRRERRQERGRSQERRQPSSSSSEKQRFYSCDRFGGREPPQPKPSLSS
HPTSPTAGQEPGPPRQGSGSVNGSPLLSTSGASTPGRGGRRQLPQTPLTPRPSITYKTAN
SSPVHFAGAQTSLPAFSPGRLSRGLSEHNALLQRDPLSQPLAPSSRIGSDPYLGQRLDSE
AAARTQPEDTLTFEEAVATNSGRSSRTSYVSSLTSQSHPLRRVPNGYHCTLGLSSGGGGR
GRHSYHHPDQDHWC
NT seq
7065 nt
NT seq
+upstream
nt +downstream
nt
atggtccgcttcggggacgagctgggcggccgctatgggggccccggcggcggggagcgg
gcgcggggcggcggggccggcggggcgggaggcccgggccccggggggctgcagccgggc
cagcgggtcctctacaagcagtcgatcgcgcagcgcgcaaggaccatggcgctgtacaac
cccatcccggtcaagcagaactgcttcaccgtcaaccgctcgctcttcgtcttcagcgag
gacaacgtcgtccgcaaatacgccaagcgcatcaccgagtggcctccgttcgagtacatg
attctggccaccatcatcgccaactgcatcgtgctggcgctggagcagcaccttccagac
ggagacaagacgcccatgtccgagcggctggatgacacagagccctacttcatcggcatc
ttctgcttcgaggctgggatcaagatcatcgcgctgggctttgtccttcacaagggctcc
taccttcggaatggctggaatgtcatggacttcgtggtggtccttacggggatcctcgcc
acagctggcactgactttgacctgcgaacgctgcgggctgtgcgtgtgctgaggcccctg
aagctggtgtctgggattccaagtttgcaggtggtgctcaagtccatcatgaaggccatg
gttccactcctgcagattgggctgcttctctttttcgccatcctcatgttcgccatcatt
ggcctcgagttctacatgggcaaattccacaaggcttgtttccccaacagcacagatgca
gatccggtaggtgacttcccgtgtggcagggaagccccagctcggctgtgtgagggcgac
actgagtgccgggagtactgggccggacccaacttcggcatcaccaacttcgacaacatc
ctgttcgccatcctgacggtgttccagtgcatcaccatggagggctggaccgacatcctc
tacaacaccaatgatgcggccggcaacacctggaactggctctacttcctgcccctgatt
atcatcggctccttcttcatgctcaacctggtgctgggcgtgctctcaggagagtttgcc
aaggagcgtgagcgggtggagaaccgccgggcctttctgaagctccgccggcagcagcag
atcgagcgggagctcaacgggtacctggagtggatcttcaaggccgaggaggtcatgctg
gccgaggaggacaagaacgcggaagagaagtcccctctggatgtgttgaagagagcagcc
accaagaagagccgaaacgacctgatccacgcggaggagggagaggaccgctttgtagac
ctctgtgctgtggggtcccccttcgctcgagccagcctcaagagtgggaagacggacagc
tcgtcatacttccgcaggaaggagaagatgttccggttcttcatccggcgcctggtgaag
gcccagagcttctactgggtggtgctgtgcgtggtggccctgaacacactgtgcgtggcc
atggtgcactaccaccagccgcagcggctcaccacggcgctgtactttgcagagtttgtt
ttcctgggtctcttcctcacagagatgtccctgaagatgtatggcctggggcccaggagc
tacttccggtcctccttcaactgcttcgattttggggtcattgtggggagcattttcgag
gtggtctgggcagccatcaagccaggaacctccttcggcatcagtgtgctgcgggcgctg
cggctgctgagaatcttcaaagtcacaaagtactggagctccctgcggaacctggtggtg
tccctgctcaactccatgaagtccatcatcagcctgctcttccttctcttcctcttcatc
gtggtcttcgctctgctgggcatgcagctctttggggggcagttcaacttccaggatgag
actccgacaaccaactttgacaccttccctgctgccatcctcactgtcttccagatcctg
accggggaggactggaacgcggtgatgtaccatgggatcgaatcgcaaggtggagttagc
aaaggcatgttctcgtccgtgtacttcatcgtcctgacgctgtttgggaactataccctg
ctgaacgtcttcctggccatcgccgtggacaaccttgccaatgctcaggagctgaccaag
gacgaagaggagatggaagaagcagccaatcagaagcttgctctgcaaaaggccaaagaa
gtggctgaagtcagccccatgtctgctgcgaacatctccattgccgcttttgtaaagcaa
actcgaggtactgtatctcgcagctcatctgtctccagcgtaaactcaccgcagcagaac
tcggccaaggcgcgctcggtgtgggagcagcgggccagccagctgcggctgcagaacctg
cgggccagctgtgaagcgctgtatagcgagatggaccctgaggagcggctgcgcttcgcc
acttcccgccacctgcggcccgacatgaagacgcacctggaccggccgcttgtggtggag
ccaggccgggatggcgcgcgggggcccgcggggggcaaggtccggcccgagggcggggag
gccggcgagggtactgacccgccacgcaggcaccaccggcaccgcgacagggacagggac
aaggctgcggccccggcgggggagccggacagggcggatgccccgaaggcggagggcggg
gacccgggggcccgggaggagcgggcacgacctcgccgcagccgcagcaaggaggccgcg
ggcccccgcgaggccaggagcgagcgaggccgcgggctgggcccggacggcggccggcgc
caccaccggcggggctccccggaggaggcggcggagcgcgagccccggcgccaccgcgca
caccggcacgcgccggagccgagcagggagggcgcgcccgggagcaagggcgagcggcga
gcgcgccaccgcggtggcgcccgggccggcccccgggaggctgagagcggggaggagccc
gcccggcggcaccgagcgcgacacaaggcgccacccgcacacgaggaggcggagaaggag
gccgaggcggaggacagggacagggacaaggagccccggaaccaccagcccagggagtcg
cactgtgacctggaggccactgtggtaattggtgtgggccctgtgcatgccctgcccagc
acttgtctagagaaggtggaagaacagccagaggatgcagacaatcagcggaatgttact
cgtatgggcagtcagccctcggatctgagcaccactgtgcatattccagtgacgctgacc
gggcctcccggggagaccacggttgctcccagtggtaatgtggatctggaaagccaagca
gaaggaaagaaggaggtggaagctgatgatgtgatgaggagcggcccccgacccattgtc
ccgtacagctccatgttctgcttaagccccaccaacctgctccgccgcttctgccactac
attgtgaccatgcggtacttcgagatggtcattcttgtggtcattgccctgagtagcatt
gccctggccgctgaggaccctgtgcagacagactcacccaggaacaacgtgctgaagtac
atggactacatcttcacgggtgtcttcacctttgagatggtgataaagatgatcgatttg
ggactgctgctgcaccctggtgcctacttccgggatctgtggaacattctggacttcatt
gtggtcagtggggccctggtggcgtttgccttctcaggctccaaagggaaagacatcagc
accatcaagtccctgagggtcctgcgtgtgctgaggccactcaagaccatcaagcggctg
cccaaactcaaagctgtgtttgactgtgtggtgaactccctgaagaacgtcctcaacatc
ctgatcgtctacatgctcttcatgttcatatttgctgtcatcgcggtgcagctcttcaag
gggaagtttttctactgcaccgatgagtccaaggagctggagcgggactgcaggggccag
tatttggactatgagaaggaggaggtggaagctcagccacggcagtggaagaaatacgac
ttccactacgacaacgtgctctgggccctgctgactctgttcactgtgtccacgggtgaa
gggtggcccatggtgctgaaacactcagtggatgccacctacgaggagcagggcccaagc
cctgggtaccgcatggaactgtccattttctacgtggtctacttcgtggtcttccccttc
ttctttgtgaacatctttgtggccttgatcatcatcaccttccaggagcagggggacaag
gtcatgtctgagtgcagcttggagaagaacgagagggcttgtatcgacttcgccattagc
gccaaaccgctgacgcggtacatgccccagaacaagcagtcgttccagtacaagacgtgg
acgttcgtggtctcaccaccctttgagtatttcatcatggccatgatagccctcaacaca
gtggtgctgatgatgaagttctatgatgcaccctacgagtatgagctgatgctgaagtgt
ctgaacatcgtgttcacatccatgttctccatggagtgcgtactcaagatcatcgccttt
ggagtgctgaactatttcagagacgcctggaatgtctttgactttgtcactgtgttggga
agtattactgatattttagtaacagagattgcgaacaacttcatcaaccttagcttcctc
cgcctcttccgtgctgccagactcatcaagctgctccgccaaggctacaccatccgcatc
ctgctctggaccttcgtccagtccttcaaggccctgccctatgtgtgcctgctcatcgcc
atgctgttcttcatctacgccatcatcggcatgcaggtgtttggaaacatcgctctggat
gatgacaccagcatcaaccgtcacaataactttcggacgtttctgcaagccctgatgctg
ctcttcaggagtgccaccggggaggcctggcatgagatcatgctgtcctgcctcagcagc
cgggcctgtgacgagctcgccaatgccacggagtgtgggagtgacttcgcctacttctac
tttgtctccttcatcttcctttgctcctttctgatgttgaacctctttgtggctgtgatc
atggacaattttgagtaccttacgcgggactcttccatcctagggcctcaccacctggac
gaattcatccgggtctgggctgagtacgacccggctgcgtgtgggcgcatcagttacaat
gacatgtttgagatgctgaaacacatgtccccgcccctggggctggggaagaaatgccct
gctcgcgttgcatacaagcgcctggttcgtatgaacatgcccatctccaatgacgacatg
accgtccacttcacatccacgctgatggccctcatccggacggcactggagatcaagctg
gctccagctggcacgaagcagcatcagtgcgacgcagagctgaggaaggagatctcctcc
gtgtgggccaacctgccccagaagaccctggacttactggtgcctccccataaacccgac
gagatgacggtggggaaggtgtacgcagctctgatgatattcgacttctacaaacagaac
aaaaccaccagagaccagattcaccaagctcccggaggcctggcccagatgggccccgtg
tccctgttccaccccctgaaggccacgctggagcagactcagccggctgtgctccgagga
gcccgcgttttccttcggcagaagagctcagcctccctcagcaacggtggggcagtacaa
acccaagagggcggcatcaaggagtctgtctcctggggcactcagaggacccaggaggta
ccctgtgaggtgaggacacccctggagcgtggccactccacagagatcccggtggtgcag
acaggaaaaccggctgtggacgtccagatgcagagcatggccctgagaggccctgacggg
gagccccaacccgggctggagagccagggccgagcggcctccatgccccgcctggcagca
gagactcagccacccccagatgccagccccatgaagcgctccatctccacactggcaccc
cagaggccccatgtggctcatctctgcaacgtggccctggaccgcgctccagccagccag
gctgccccccaccaccaccaccgctgccatcgccgcagggaccggaagcagaagtccctg
gagaaggggcccagcctgtctgcagatacagatggtgcaccctatagcaccgcggggccg
gggcccccgccgcccccaggggatggggcagcaggctgccgacgggagcgcaggcaggag
cggggccggtcccaggaacgaaggcagccctcctcctcctcctctgagaagcagcgcttc
tactcctgcgaccgctttggaggccgtgagcccccacagcccaagccctctctcagcagc
catccgacatcgcccacggctgggcaggagccaggacccccgagacagggtagtggctcc
gtgaacgggagccccctgctgtcaacatctggtgctagcaccccgggccgcggcgggcgg
aggcagctcccccagaccccgctgacgccccgtcccagcatcacctataaaacagccaac
tcctcgcctgtccactttgccggggctcagaccagcctccctgccttttcccccggccgg
cttagccgtggcctttcagaacacaacgccctgctccagagagaccccctcagccagccc
ctggcccccagctctcggattggctctgacccttacctggggcagcgtctggacagcgag
gccgcagcccgcacccagcctgaggacacgctcaccttcgaggaggctgtggccaccaac
tcgggccgctcctcccggacttcttacgtgtcttccctgacctcccagtcccaccccctc
cgccgggtgcccaatggctaccactgcactctggggctcagctcgggcgggggcggccgg
gggcggcacagctaccaccaccccgaccaagaccactggtgctag
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integrated database retrieval system