Odocoileus virginianus (white-tailed deer): 110134785
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Entry
110134785 CDS
T10722
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1 isoform X1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
110134785 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ovr03021
]
110134785 (POLR1A)
Enzymes [BR:
ovr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
110134785 (POLR1A)
Transcription machinery [BR:
ovr03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
110134785 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_1
Motif
Other DBs
NCBI-GeneID:
110134785
NCBI-ProteinID:
XP_020745108
UniProt:
A0A6J0X5H7
LinkDB
All DBs
Position
2:46479372..46562997
Genome browser
AA seq
1719 aa
AA seq
DB search
MLGSKNMPWRRLQGISFGMYSAEELKKLSVKSITNPRYLDSLGNPSVNGLYDLALGPADS
KEVCSTCVQDFTNCSGHLGHIELPLTVYNPLLFDKLYLLLRGSCLNCHMLTCPRAVVHLL
LCQLRVLEVGALQAVYELERILYRFLEENANPTACEIQEELEQYTVKILQNNLLGSQGAQ
VKNVCESRSKLISVFWKVHMTAKRCPHCKTGRSVVRKEHNSKLTITYPAMVHRRADQKDT
EPQGIEEAQMGKRGYLTPSSAQEHLIALWKNEGFFLNYLFLGLEDVGMESRFNPSMFFLD
FLVVPPSRYRPVNRLGDQMFTNGQTVNLQAVMKDVVLIRKLLALMAQEQELPSEVAAPTT
EEEKDSSMAMDRSFLSQLPGQSLTDKLYNIWIRLQSHVNIVFDSEMDKLMMEKYPGIRQI
LEKKDGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTYPQPVTPWNVQEL
RQAVINGPNVHPGASMVINEDGSRTALSASDLTQREAVAKQLLTPATGAPKPQGTKIVCR
HVKNGDILLLNRQPTLHRPSIQAHRARVLPEEKVLRLHYANCKAYNADFDGDEMNAHFPQ
SELGRAEAYVLACTDQQYLVPKDGQPLAGLIQDHMVSGANMTIRGCFFTREQYMELVYRG
LTDKVGRVKLFPPAILKPFPLWTGKQVVSTLLINIIPEDHIPLNLSGKAKIGGKAWVKEP
PRSVPGFNPDSMCESQVIIRAGELLCGVLDKAHYGSSAYGLVHCCYEIYGGETSGRVLTC
LARLFTAYLQLYRGFTLGVEDILVKPKADVRRHGIIEESTHCGPRAVRAALNLPEAASCD
EVRGKWQDAHLGKDQRDFNMIDLKFKEEVNHYSNEINKACMPFGLHRQFPENNLQMMVQS
GAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAGGFVTGRFLTGIK
PPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYG
EDGLDIPKTQFLQPKQFPFLTSNYEVIMKSKHLHEVLSRADPQKALRHFRAIKKWHSKHS
NTLLRKGAFLNYSQKIQAAVKALNLEGTNQNGRSPETYQMLRMWAELDEQSRRKYQKKAA
PCPDPSLSVWRPDIYFASVSETFEKKMDDYSCEWAAQAERSYEKSGLSLDSLRTLLQLKW
QRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIK
TPMMSVPVFNTKKALKKVKSLKKQLTRVCLGEVLEKIDVQESFCMGEKQNKFRVYQLRFQ
FLPHAYYQQEKCMRPEDILHFMETRFFKIMMEAIRKKNSKASAFRSVNTRRATQRDLDNA
GESERSRGGQEGDEEEEGCIVDAEAEEGDADASDAKRKEKQEEEVDYDSEEEEEEKEEEE
EKEDEDGQEEGASLKEGVQQEQEEGGWVPEENSLPSAPLMRPQKRTLSREPQGAEAVERR
VQAVRECHPFIEDYQYDTQGGLWCQVTLKLPLMKVNFDMSSLVASLAQGAVIYATKGITR
CLLNETTNSKNEKELVLNTEGINLPELFKYAEVLDLRRLYSNDIHAMASTYGIEAALRVI
EKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFGIRSNSSPLQQMTFETSFQFL
KQATLMGSHDELRSPSACLVVGKVVKGGTGLFELKQPLR
NT seq
5160 nt
NT seq
+upstream
nt +downstream
nt
atgttgggctcaaagaacatgccctggcggcggctgcagggcatttccttcgggatgtat
tcggccgaagaactcaagaaattaagcgtgaagtccattacgaaccctcggtacctggat
agcctggggaacccctcggtgaatggcctgtatgatttagctctgggccccgctgactcc
aaagaggtgtgctctacctgcgtgcaggacttcaccaactgctctgggcacctgggccac
attgagctcccgctcaccgtgtacaaccctctcctcttcgataaactctacctattgctc
cggggctcctgtttaaactgtcacatgctgacctgcccccgggctgtggttcacctctta
ctctgccaactgagagtcctggaagttggggccctgcaagcagtgtatgagctggagaga
attctctaccggtttctggaagaaaatgctaatcctactgcctgtgaaattcaggaagag
ctagaacaatatacagtcaaaatcctgcagaacaacctcctgggatcccagggtgcacaa
gtgaaaaatgtctgtgagagcaggagcaaactcatctctgtcttttggaaggtacatatg
accgctaagagatgtccccactgcaaaactgggcggtcagtggtccgaaaggagcacaat
agcaaactaaccatcacatatccagccatggtgcacaggagagctgaccagaaggacact
gaaccccagggaattgaggaagctcagatgggaaaacgaggatacctgaccccttccagt
gctcaagaacatctcatagctctttggaaaaatgaagggttctttctgaattaccttttt
ttgggactggaagatgttggcatggagtccaggttcaaccccagcatgttctttctggat
ttcttggtggtaccaccctcaaggtatcgccctgtcaaccgcctcggggaccagatgttc
accaacgggcagacggtgaacctgcaggctgtcatgaaggacgtggttctaatccgaaag
cttctggcactgatggcccaagaacaggagctgccaagtgaggtggcagcacccaccaca
gaagaggaaaaagactcttcgatggctatggaccgatcctttttgagtcagcttccaggg
cagtccctcacagacaaactttacaacatttggattcgccttcagagccacgttaatatt
gtgtttgatagtgagatggacaaattaatgatggaaaagtaccctggcattagacagatc
ctggagaagaaggatggtttgttccgaaagcacatgatggggaagcgtgtagactacgca
gcgcgctcggtcatctgcccggacatgtacatcaacaccaacgaaattggaattcccatg
gtgtttgccacaaagctgacctaccctcaaccagtcaccccctggaatgttcaggaactg
aggcaggcggtcatcaacggccccaacgtgcaccccggagcctctatggtcatcaacgag
gatggcagtcgcacagccctgagcgcctcggacctcacgcagcgggaggccgtggccaaa
cagctcctgacaccagctacgggggcccctaagccccaggggacaaaaattgtgtgccgg
catgtgaagaacggggacattctcctcctgaaccggcagcccaccctgcacaggccctcc
atccaggcgcatcgcgcccgcgtcctccccgaggagaaagtcctgcggctccactacgcc
aactgcaaggcctacaacgccgacttcgatggagacgagatgaacgcccacttcccccag
agtgaactgggccgggccgaggcctacgtcctggcctgcaccgatcagcagtaccttgtt
cccaaggatggccagccattggcggggctgatccaagatcacatggtttcaggagcaaac
atgaccattcgaggctgctttttcacccgggagcagtatatggagctggtgtaccgagga
ctcacagacaaagtggggcgtgtgaagctctttcctcctgccatcctgaagccctttcct
ctgtggacagggaagcaggtcgtgtccacattgctcatcaacataatcccggaggaccat
atccccctgaacttgtcgggaaaggcgaagatcggcggaaaggcctgggtgaaggagcct
cctcggtccgttcccggctttaaccccgactccatgtgtgagtcccaggtgatcatcaga
gctggggagctgctctgcggggtgctggacaaggcgcactacggaagctccgcctacggc
ctggtccactgctgctacgagatctacggtggggagaccagcggcagggttctcacctgc
ctggcccgcctcttcaccgcctacctgcagctctacagaggcttcaccttaggagtagaa
gacattttggtcaagccgaaggcggatgtcaggagacatgggatcattgaagagtccacc
cactgtgggccccgggccgtcagggctgcattaaacctgccagaggcagcatcatgtgat
gaggtccgagggaagtggcaggatgcccatctgggtaaggaccagagggattttaacatg
attgacctgaagttcaaggaggaagtgaaccattacagcaatgagattaacaaggcatgc
atgcccttcggcctgcacagacagttcccagagaataatctgcagatgatggtgcagtct
ggagccaaaggttcaacagtgaacaccatgcagatctcgtgcctgctgggccagatcgaa
ttggaaggccggagaccccctctcatggcatctggcaagtcgttaccctgctttgagcct
tatgaattcacccccagggctggtggcttcgtcactggcaggttcctcactggcatcaag
cctccggagttcttcttccactgcatggccgggcgagagggtctggtggacactgctgtg
aagaccagccgttccggctacctccagaggtgcatcatcaaacacctggaggggctggtg
gtccagtacgacctgacagtccgcgacagcgacggtagcgtggtgcagttcctgtacggg
gaggacggcctggacatccccaagacacagttcctgcagcctaagcagttccccttcctc
accagcaactatgaggtgataatgaaatcgaagcatctccatgaagttttatccagagcg
gatccccagaaagctctccgtcacttccgagccatcaaaaaatggcacagcaagcattcc
aacaccctcctgaggaaaggtgccttcttgaattactcccaaaaaattcaggcggccgtg
aaagccttgaaccttgagggcacaaaccagaacggccgcagccctgagacttaccagatg
ctgaggatgtgggctgagttagatgaacaaagccggaggaagtaccagaagaaggcggct
ccttgtcccgaccccagtctgtctgtctggcgcccggacatctactttgcatctgtgtca
gagacatttgaaaagaagatggacgactacagctgtgagtgggcagctcaggcagagagg
agttacgagaaatcagggctttctctcgacagtttgaggactctgctgcagctcaagtgg
cagcgctcactatgtgacccgggtgaggctgtgggcctgctggccgcccagagcatcggg
gagccctccacacaaatgaccctgaacaccttccactttgccggcagaggcgagatgaac
gtcaccctgggcattccgaggttgcgggagatcctcatggtggccagcgccaacatcaag
acgccgatgatgagtgtacctgtgttcaataccaagaaagcgctgaagaaagtgaaaagc
ctgaagaagcaactcaccagagtgtgtctcggggaggtgttggagaaaattgatgttcag
gagtccttctgtatgggggagaaacagaacaagttccgggtataccagctgcggtttcag
ttcctgccacacgcgtactaccagcaggagaagtgcatgaggcccgaggacatcttacac
ttcatggaaaccaggttctttaaaattatgatggaagccatcaggaagaagaacagtaaa
gcatcggctttcagaagtgtgaacacgcggagagccacccagcgggatctagacaatgct
ggcgagtcggagaggagtcggggagggcaggagggcgatgaggaagaggaggggtgcatt
gtggacgctgaagctgaggagggagatgctgacgcctcggatgccaaacgcaaggaaaaa
caagaggaggaggttgactatgacagcgaggaggaggaggaggagaaggaggaggaagag
gagaaggaggacgaggacggtcaggaggaaggggccagcctcaaagaaggcgttcagcag
gagcaggaggaaggtggctgggtccctgaggagaactcgctccccagcgcccccctgatg
cggccacagaagcgcaccctaagccgggagccccagggggctgaggcggtggagcgccgg
gtacaggccgtgcgcgagtgccacccgttcatagaggactaccagtacgacacacagggc
ggcctgtggtgccaggtgacactgaagctccctctcatgaaggtcaactttgacatgagc
tccctggtagcatccttggcccaaggagccgtaatctatgcaaccaagggtatcacaagg
tgcctcctgaatgagaccaccaacagtaagaatgagaaggaacttgtcttaaacacagaa
ggaatcaacctcccagagctattcaagtatgccgaggttctagatctgcgccgtctctat
tccaatgacatccatgccatggccagcacgtatggcatcgaggctgcactgcgcgtgatc
gagaaagagatcaaggatgtgtttgctgtatatggcatcgccgttgacccccgccacctc
tccctggtggctgattacatgtgctttgagggcgtttacaagcccctgaaccgctttgga
atccggtcaaactcctcgccactgcagcagatgacgtttgagaccagcttccagtttctg
aagcaggccaccctcatgggatcccatgacgaactgaggtccccatcagcctgcctcgtg
gtcgggaaggtcgtcaagggtgggaccggcctcttcgagctcaagcagccactgagatag
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integrated database retrieval system
