Odocoileus virginianus (white-tailed deer): 110135178
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Entry
110135178 CDS
T10722
Symbol
CASC3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr03013
Nucleocytoplasmic transport
ovr03015
mRNA surveillance pathway
Brite
Messenger RNA biogenesis [BR:
ovr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110135178 (CASC3)
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GFIT
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NCBI-GeneID:
110135178
NCBI-ProteinID:
XP_020745749
UniProt:
A0A6J0XC12
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Position
17:38675783..38698281
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AA seq
703 aa
AA seq
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MADRRRQRASQDTEDEESGASGSDSGGSPARGGGSCSGSAGGGGSGSLPSQRGGRTGALH
LRRVESGGAKSPEESECESEDGIEGDAVLSDYESAEDSEGDDGEYSEEENSKVELKSEAN
DAANSSAKDEKGEEKPDTKGAVTGERQSGDGQESTEPVENKVGKKGPKHLDDDEDRKNPA
YIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALY
GYDIRSAHNPDDIKPRRIRKPRFGSSPQRDPNWIGERPSKSHRHQGLGGTLPPRTFINRN
AAGTGRMSAPRNYSRSGGFKEGRTGFRPMEAGGQHAGRSGETVKHETSYRSRHLEQTPVR
DPSPEADVQVLGSPEKEEVAPEIPNPAPDTAPPAPDRPVEKKSYSRARRTRIKAGDAGKV
AEEAPPPPEGLTPAPPIPEATSPTPAKTGNWEAPVDSTTGGLEQDVAQLNITEQNWSPGQ
PSFLQSRELRGMPNHMHIGAGPPPQFNRMEEMGVQGGRAKRYSSQRQRPVPEPPAPPVHI
SIMEGHYYDPLQFQGPIYTHGDSPAPLPPQGMIVQPEMHLPHPGLHPHQTPAPLPNPGLY
PPPVSMSPGQPPPQQLLAPTYFSAPGVMNFGNPSYPYAPGALPPPPPPHLYPNTQAPSQV
YGGVTYYNPAQQQVQPKPSPPRRTPQPVTIKPPPPEVVSRGSS
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcggcggcagcgcgcttcgcaggacaccgaggacgaagaatctggtgcc
tccggctcagacagtggcggttccccggcgcggggcggtgggagctgcagcggtagcgct
ggaggcggcggcagcggctctctgccttcccagcgcggaggccgaactggggcccttcat
ctgcggcgggtggagagcgggggcgctaagagccctgaggagtcggagtgtgaaagtgaa
gatggcatcgagggcgatgctgttctctcggattatgaaagtgcagaagactcagaaggt
gatgacggcgagtacagtgaagaggaaaactccaaagtggagctgaaatcagaagccaat
gatgctgctaattcttcagcaaaagatgagaagggagaggagaaacctgacaccaaaggt
gctgtgactggagagaggcagagcggggatggacaggaaagcacagagcctgtggagaac
aaagtcggtaaaaagggccctaagcatttggatgatgatgaagatcggaagaacccagca
tacataccccggaaagggctcttttttgagcatgatcttcgagggcagactcaggaggaa
gaagtcagacccaagggacgtcagcgaaagctgtggaaggatgagggtcgctgggagcat
gacaagtttcgggaagatgaacaggctccaaagtcccgacaggagctcattgctctttat
ggctatgacatccgctcagctcacaatcctgatgatatcaaaccccgaagaatccggaaa
cctaggtttgggagttctccgcaaagagatccaaactggattggtgagcggccaagtaag
tctcatcgccaccagggtcttgggggcaccctaccgcccaggacatttatcaacaggaat
gctgcaggtactggccgcatgtcagctcccaggaattactctcgatctggaggcttcaag
gagggtcgtactggttttcggcccatggaagctggtggacagcatgctggccgatctggt
gagactgttaaacatgagactagttaccggtctcggcacttggagcagactcctgtaagg
gatccatctccagaagcagatgttcaagtgcttggcagtcctgagaaggaagaggtagcc
cccgagataccaaatcctgctcctgatactgcaccaccagctcctgacaggcctgttgaa
aagaaatcctattcccgggcaagaagaaccagaatcaaagctggagatgcaggcaaggtt
gcagaggaggcaccccctccacccgaagggctgaccccagcacctccaatcccagaagct
acatctcctacgcctgctaagactggaaactgggaggctccagtggattctactacaggg
ggtcttgaacaagatgtggcacaactaaatataacagaacagaattggagtccagggcag
ccttccttcctgcaatcacgggagcttcggggtatgcccaaccacatgcacataggagca
ggacctccacctcagttcaaccggatggaagaaatgggtgtccagggtgggcgagccaaa
cgctattcatcacaacggcaaagacctgtgccggagccccctgcccctcctgtgcatatc
agtatcatggagggacattactatgatccactgcagttccagggaccaatctatacccat
ggtgacagccctgccccactgcctcctcagggcatgattgtacagccagaaatgcacctt
ccccatccaggtttacatccccaccagacaccagcgcctctgcccaatccaggcctctat
cccccaccagtatccatgtctccagggcagccaccacctcagcagttgcttgctcctact
tacttttctgctccaggcgtcatgaactttggtaatcccagttacccttatgctccaggg
gcattgcctcccccaccacctcctcatctgtatcctaacacacaggccccatcgcaggta
tatggaggagtgacctactataaccccgcccagcagcaggtgcagccaaagccctcccca
ccccggaggactccccagccagtcaccatcaagcccccaccgcctgaggttgtaagcagg
ggttccagctaa
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