Odocoileus virginianus (white-tailed deer): 110135316
Help
Entry
110135316 CDS
T10722
Symbol
MED16
Name
(RefSeq) LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 16
KO
K15159
mediator of RNA polymerase II transcription subunit 16
Organism
ovr
Odocoileus virginianus (white-tailed deer)
Pathway
ovr04919
Thyroid hormone signaling pathway
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
110135316 (MED16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ovr03021
]
110135316 (MED16)
Transcription machinery [BR:
ovr03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Tail
110135316 (MED16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med16_bridge
Med16_N
Med16_C
WD40
Beta-prop_IFT140_1st
Beta-prop_WDR3_1st
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR35_TULP_N
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_HPS5
Beta-prop_EML_2
Beta-prop_RIG_2nd
DSE1_N
WD40_MABP1-WDR62_2nd
Beta-prop_EML
ASA1
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
110135316
NCBI-ProteinID:
XP_020745942
UniProt:
A0A6J0X7T0
LinkDB
All DBs
Position
3:complement(40310625..40326212)
Genome browser
AA seq
829 aa
AA seq
DB search
MDLAYICEWEKWPKSTHCPSGPLACTWSCRNLIAFTTDLRSDDQDLTRMIHILDTEHPWD
VHSIRSEHSEAITCLEWDQSGSRLLSADADGQIKCWSMADHLANSWESPVGSVVEGDPIV
ALSWLHNGVKLALHVEKSGASSFGEKFSRVKFSPSLTLFGGKPMEGWIAVTVSGLVTVSL
LKPSGQVLTSTESLCRLRGRVALADIAFTGGGNIVVATADGSSASPVQLYKVCVSVVNEK
CRIDTELLPSLFMRCTTDLSRRDRLPAITHLKFLARDMSEQVLLCASSQTSSVVECWSLR
KEGLPVNNIFQQLSPAVGDKQPTILKWRILSATNDLDRVSAVALPKLPISLTNTDLKVAS
DTQFYPGLGLALAFHDGSVHIVHRLSLQTMAIFYSSAAPRPVDEPALKRPRTTGPAVHFK
AMQLSWTSLALVGIDNHGRLSMLRISPSMGHSLDVGLALRHLLFLLEYCMVTGYDWWDIL
LHVQPGMVQSLVEKLHEEYTRQKAELQQVLSTRILAMKASLCKLSPCTVTRVCDYHAKLF
LIAISSTLKSLLRPHVLNTPDKSPGDRLTEICAKITDVDIDKVMINLKTEEFVLDMNTLQ
ALQQLLQWVGDFVLYLLASLPNQGSPLRPGHSFLRDGTSLGMLRELMVVIRIWGLLKPSC
LPVYTATSDTQDSMSLLFRLLTKLWICCRDEGPTSEPDEALVDECCLLPSQLLIPSLDWL
PVSDGLVSRLQPKQPLRLHFGKAPALPGGSTGLQLDGLIRAPGQPKMDHLRRLHLGAYPT
EACKACTRCGCVTMLKSPNKTTAVKQWEQRWIKNCLCGGLWWRMPHSYP
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggacctagcttacatctgtgagtgggaaaaatggcccaagagcacccactgcccttca
ggtcccctggcctgcacctggtcctgccgcaacctcatcgccttcaccacggacctgcgc
agcgatgaccaggacctgacccgcatgatccacatcctggatactgagcatccctgggac
gtgcactccatccgctcagagcacagcgaggccatcacctgcctggagtgggaccagtcc
ggctcgcgtctgctgtcagctgatgctgatgggcagatcaagtgctggagcatggctgac
cacctggccaacagctgggagagccccgtgggcagcgtggtggaaggggaccccatcgtg
gccttgtcctggctgcacaacggcgtgaaactggccctgcacgtggaaaagtctggtgcc
tccagcttcggggaaaagttctcccgcgtcaagttctcaccatcgctcacactgttcggg
ggcaagcccatggagggctggatcgctgtcacggtcagcggcctggtcactgtgtccctg
ctcaagcccagcgggcaggtgctcacctcgactgagagcctgtgccggctgcgcggccgc
gtggctctggccgacatcgccttcacaggtggtggcaacatcgtggtggccacagcggat
ggcagcagcgcatcaccggtgcagctgtacaaggtgtgcgtgagcgtggtcaacgagaag
tgccgcatcgacaccgagctcctgccctcgctcttcatgcgctgcaccactgatctcagc
cgccgcgaccggctgcccgccatcacccacctcaagttcctggcccgcgacatgtcagag
caggtgctgctgtgtgcatccagccagacgagcagtgtggtggagtgttggtcactgcgc
aaggaggggctccctgtgaataatattttccagcagctctcaccggctgttggcgacaaa
cagcccacaattctcaaatggcggattctctcggccaccaatgacctggaccgtgtgtct
gctgtggcgctgcccaagctgcccatctcgctcaccaacactgacctgaaggtggccagt
gacacccagttctaccctggcctcgggctggccctggccttccacgacggcagtgtccac
atcgtgcaccggctctcgctgcagaccatggccatcttctacagctccgccgccccgcgc
cccgtggacgagccggctctcaagcgcccccggaccacaggccccgccgtccacttcaag
gccatgcaactctcctggacctccctggccctcgtgggcattgacaaccacggcaggctg
agcatgttacgtatctcgccatccatgggccactcactggatgtggggctggccctgcgg
cacctgctcttcctgctggagtactgcatggtgaccggctacgactggtgggacatcctg
ctgcacgtgcagcctggcatggtgcagagcctggtggagaagctgcacgaggagtacacg
cgccagaaggccgagctgcagcaggtcctgtccacccggatcctggccatgaaggcctca
ctgtgcaagctgtctccctgcacggtgactcgcgtatgcgactaccacgcaaagcttttc
ctcatcgccatcagctccacgctcaagtcactgctgcgcccgcacgtgctcaacacacct
gacaaaagtcctggcgaccggctgaccgaaatctgtgccaagatcacagacgttgacatt
gacaaggtcatgatcaacctcaagacggaagagttcgttctggacatgaacacgctccag
gcactgcagcagctcctgcagtgggtgggcgactttgtgctctacctcctggccagtttg
cccaaccagggctccccgctgcgaccaggccacagtttcctgcgggatggcacatcactg
ggcatgctgcgagagctgatggttgtcatccgcatctggggcctgctgaagcccagctgc
ctgcctgtgtacacggctacctcagacactcaggacagcatgtccctgctctttcgcctg
ctcaccaagctctggatctgctgtcgtgacgagggtcccacaagtgagccagatgaggcg
ctggtggatgagtgctgtctgctgcccagccagctactcatccccagccttgactggctg
cctgtgagtgacggactggtcagtcgcctgcagcccaagcagcccctgcgcctgcacttt
ggcaaggcccctgctctgcctggtggctccaccggcctgcagctggacggcctcatcagg
gcgcctggccagcccaagatggaccacttgcggagactgcacctgggcgcctaccccacg
gaggcctgcaaggcctgtaccaggtgcggttgcgtcaccatgctcaagtcacccaacaag
accaccgccgtcaagcagtgggaacagcgctggatcaagaactgcctgtgtggggggctc
tggtggcgcatgccccacagctacccctga
DBGET
integrated database retrieval system
