Odocoileus virginianus (white-tailed deer): 110135333
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Entry
110135333 CDS
T10722
Symbol
SBNO2
Name
(RefSeq) protein strawberry notch homolog 2 isoform X1
KO
K26273
protein strawberry notch
Organism
ovr Odocoileus virginianus (white-tailed deer)
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ovr03036
]
110135333 (SBNO2)
Chromosome and associated proteins [BR:
ovr03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
110135333 (SBNO2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
110135333
NCBI-ProteinID:
XP_070321385
UniProt:
A0ABM4I0P0
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Position
3:complement(40491257..40531787)
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AA seq
1381 aa
AA seq
DB search
MLAVGPAMDGELPSHEPPPAGSVLYSPPPLQTPLCGPSVQDTMLHYPWWNSFSPTTYPAF
SSESHQFMNSSFIMGQPCMDTSYGPAATAPSFPPKSSDFPQPVFQDSSYLDDLSNASIFS
SSVDSLSDIADTPDFPHADSLSQVPTIWDVSTGPSAHDKLFPPSGPFTGLEDPVSSLPST
PLLISYQAQSQPEEDDEAEEDEAEELGHAETYADYVPSKSKIGRQHPDRVVETSTLSSVP
PPDITYTLALPSSDSGALSALQLEAITYACQQHEVLLPSGQRAGFLIGDGAGVGKGRTVA
GVILENYLRGRKKALWFSVSNDLKYDAERDLRDIAAPGIAVHALSKIKYGDNTTSEGVLF
ATYSALIGESQAGGQHRTRIRQILEWCGEAFDGVIVFDECHKAKNASSTKMGKAVLDLQN
KLPLARVVYASATGASEPRNMIYMSRLGIWGEGTPFRTFEEFLHAIEKRGVGAMEIVAMD
MKVSGMYIARQLSFSGVTFRIEEIPLTPAFERIYNRAALLWAEALGVFQQAADWIGLESR
KSLWGQFWSAHQRFFKYLCVAAKVHRLVELAQEELAQDKCVVIGLQSTGEARTREVLGEK
EGQLDGFVSAAEGVFLSLIQKHFPSTKRRRERGAGSKRKRRPRGRGAKAPRLACEAAGVI
RISDDSSTESDGGLDSDFHSSPESLLDDDVVIVDAIGLPADDRGPLCPPQRDLHGPGVLE
RVERLKQDLLAKVQALGRELPVNTLDELIDQLGGPECVAEMTGRKGRVVSRPDGTVAFES
RAEQGLSIDHVNLREKERFMSGEKLVAIISEASSSGVSLQADRRVQNQRRRVHMTLELPW
SADRAIQQFGRTHRSNQVSAPEYIFLISELAGERRFASIVAKRLESLGALTHGDRRATES
RDLSKYNFENKYGARALSCVLTTILSQTESKVPLPQGYPGGDATFFRDMKQGLLSVGIGG
RESRSGCLDVEKDCSISKFLNRILGLEVHKQNALFQYFSDTFDHLIAADKREGKYDMGIL
DLAPGIDEIYEESQQVFLAPGHPQDGQVVFYKISVDRGLKWEEAYARSLELTGTHDGFYL
SYKVRGNKPSCLLAQQNRGKLFTVYKPNIGRQSQLESLDSLSRRFHRVTAEEAREPWESS
YTFSLTHCSHTTWNRHCRLVQEGKDCAQGLRLRHHYMLCGALLRVWGRIAAVMADVTSSS
YLQIVRLKTKDKKKQVGIKIPEVCVRRVLQELRLMDADVKRKQACTRGLLAPPPTPRPLA
LPFGPGEVLDLTYSPPAQAFPTPSPFTFPALGPGLGPGPGSGGQLLGAPDTPDAPADPVA
LLHQGCEINFKEVLEDMLRSLNAAPPPEPPGPLGAGAAGAPAGGAPERQSVIQFSPPFPN
S
NT seq
4146 nt
NT seq
+upstream
nt +downstream
nt
atgctggcagtggggcccgccatggacggggagctcccttcgcacgagcccccgccagct
ggcagcgtcctgtacagtccgccgcccctgcagaccccgctgtgtgggcccagcgtccag
gacaccatgctgcactacccctggtggaacagcttctcgcccacgacatacccagccttc
tccagtgaaagccaccagttcatgaattcctccttcatcatgggccagccctgcatggac
accagctatggccctgcggccaccgcccccagcttcccaccaaagagcagtgattttcct
cagcctgtcttccaggactcctcatacctcgatgacctctccaacgcttccatcttctcc
tcgtccgtggactccctctcggacatagccgacacgcctgacttcccgcacgctgacagc
ctcagccaggtgcctaccatctgggacgtgagcaccggcccctccgcccatgacaagctg
ttcccgcccagtgggccatttacaggcctcgaggaccctgtgtcctccctccccagcacc
ccacttctcatcagctaccaggctcagagtcagcctgaggaggacgacgaggccgaggag
gatgaggcagaggagctgggccacgcggagacgtacgctgactacgtgccatccaagtcc
aagattgggaggcagcacccggaccgtgtggtggagaccagcacgctgtccagcgtcccg
ccgccggacatcacctacaccctcgccctaccctcctcggacagcggggccctgtccgcc
ttgcagctggaggccatcacctatgcctgtcagcaacatgaggtcctgctccccagcggg
cagcgcgcgggcttcctcatcggagatggcgcgggtgtgggtaagggccgcacggtggcc
ggtgtcatcctggagaactacctgcggggcaggaagaaggccttgtggttcagcgtctcc
aatgatctcaagtacgacgcggagcgcgacctccgggacatcgccgcccccggcatcgcg
gtgcacgcactgagcaagatcaagtacggcgacaacactacctcagagggcgtcctcttc
gccacctattccgccctgatcggtgagagccaggccggtgggcagcaccgcacgcgcatc
cggcagatcctggagtggtgcggggaggccttcgacggcgtgattgtgtttgatgagtgc
cacaaagccaagaacgcaagctccaccaagatgggcaaggctgtgctggatctgcagaac
aaactgcccctggccagggtggtctatgccagcgccacaggtgcctctgagccccggaac
atgatctacatgagccgcctgggcatctggggtgagggcacacccttccggaccttcgag
gaatttctgcatgccatcgagaagaggggtgtgggcgccatggagattgtggccatggac
atgaaggtcagtggcatgtacatcgctcgccaactcagcttctctggtgtcaccttccgt
atcgaggagatcccgctgaccccggccttcgagcgcatctataaccgggcagccctgctg
tgggccgaggccctgggcgtgttccagcaggcagccgactggatcggcctggagtcgcgc
aagtccctgtggggccagttctggtcagcccatcagcgcttcttcaagtacctgtgtgtg
gccgccaaggtgcaccggctggtagagctggcccaggaggagctggcccaggacaagtgt
gtggtcatcgggctgcagtccacaggtgaggcgcggacccgggaggtgctgggcgagaag
gagggacagcttgatggcttcgtgtccgccgccgaaggcgtctttttgtcgctaattcag
aagcactttccttcaaccaagagaaggcgagagagaggagcaggcagtaagagaaagcgg
cggccacggggccgtggggccaaggcgcccaggctggcgtgtgaagcggcgggtgtgatc
cgcatcagtgatgacagcagcacggagtcagatggcggcctggacagtgacttccactcc
tcccccgagtccctgctggacgacgatgtggtcatcgtggatgccatcgggctcccggcc
gatgaccgcggccccttgtgccccccacagcgggacctgcatggccccggtgtcctggag
cgggttgagcggctgaagcaggacctgctggccaaggtgcaggcgctgggccgggagctg
ccagtcaacaccctggacgagctcatcgatcagttagggggcccagagtgcgtggccgag
atgaccggcaggaagggccgcgtagtgtccagacctgacgggacagtggcgttcgagtca
cgagcggagcagggtctctccattgatcacgtgaacctcagggagaaggaacgcttcatg
agtggggagaagcttgtggccatcatctcagaggcctccagctctggtgtctccctccaa
gctgaccgccgcgtccagaaccagcggcgccgggtgcacatgacgctggagctgccctgg
agtgctgaccgagccatccagcagtttgggcggacccaccgctccaaccaggtctctgcg
ccggagtacatcttcctcatttcggagctggcgggggagcgtaggtttgcttccatcgtg
gccaagcggctggagagcctgggggctctgacccacggggaccgccgtgccactgagtcc
cgggacctgagcaagtacaactttgagaacaagtacggcgcccgggcactcagctgcgtc
cttaccaccatcctaagccagacggagagcaaggtgccactgccccagggctaccccgga
ggggatgccaccttcttccgcgacatgaagcaagggctgctgtcagtgggcattggcggg
cgtgagtcccggtccggctgcctggacgtggagaaggactgctccatcagcaagttcctg
aaccgcatcctggggttggaggtgcacaaacagaacgcactcttccagtacttctctgac
acctttgaccacctcatcgctgccgacaagagggagggcaaatacgacatgggcatcctg
gacctggcccctggcatcgatgagatctacgaggagagccagcaggtgttcctggcgccc
gggcacccgcaggacggacaggtggtcttctacaagatcagtgtggaccgcggcctaaag
tgggaagaggcctatgcccggtcgctggagctgacgggcacccacgacggcttctacctc
tcctacaaggtccgcggcaacaagcccagctgcctgctggcccagcagaaccgcggcaag
ctcttcaccgtgtacaagcccaacatagggcggcagagccagctagagtccttggatagc
ctgagccggaggttccaccgggtgacggcagaggaggccagggagccctgggaaagcagc
tacacgttctcgctgacgcactgcagccacaccacgtggaaccggcactgccggctggtg
caggagggcaaggactgcgcacagggcctgcggctgcgccaccactacatgctgtgcggg
gccttgctgcgcgtgtggggccgcatcgccgccgtcatggccgatgtcaccagcagcagc
tacctgcagatcgtgcgcctcaagaccaaggacaagaagaagcaagtcggcatcaagatc
ccagaggtttgcgtgcgccgagtcctgcaggagctgcggctgatggacgctgacgtgaag
cgcaagcaagcgtgcactcggggtctccttgcaccgccgcccaccccacgcccgcttgct
ttgcccttcggccctggggaggtcctggacctcacgtatagcccgccggcccaggccttc
cccacgccctcacccttcaccttcccggccctgggcccgggcctgggcccaggccccggc
tccggcggccagctgctaggcgcccccgacacccccgacgccccagctgaccccgtggca
cttctgcaccagggctgtgaaatcaactttaaggaggtgctggaggacatgctgcgctcg
ctcaatgccgcgccgccccctgaaccccccggccctctgggtgcgggagcggcgggggca
ccggccggtggagcaccagagcggcagagcgtcatccagttcagccccccgtttcccaac
tcctag
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