Odocoileus virginianus (white-tailed deer): 110135465
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Entry
110135465 CDS
T10722
Symbol
SHANK1
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 1 isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
110135465 (SHANK1)
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
SAM_1
Ank_5
SH3_2
SAM_2
PDZ_6
PDZ
SH3_1
SH3_9
FERM_f0
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
110135465
NCBI-ProteinID:
XP_070306528
UniProt:
A0ABM4GT85
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All DBs
Position
20:5083084..5133798
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AA seq
2178 aa
AA seq
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MTHSPASSEDEERHSASECPEGGSESDSSPDGPGRGPRGTRGRGSGAAGSLASIRGLQGR
SMSVPDDAHFSMMVFRIGIPDLHQTKCLRFNPDATIWTAKQQVLCALSESLQDVLNYGLF
QPATSGRDANFLEEERLLREYPQSFEKGVPYLEFRYKTRVYKQTNLDEKQLAKLHTKTGL
KKFLEYVQLGTSDKVARLLDKGLDPNYHDSDSGETPLTLAAQTEGSVEVIRTLCLGGAHI
DFRARDGMTALHKAACARHCLALTALLDLGGSPNYKDRRGLTPLFHTAMVGGDPRCCELL
LYNRAQLGIADENGWQEIHQACQRGHSQHLEHLLFYGAEPGAQNASGNTALHICALYNKE
TCARILLYRGANKDVKNNSGQTPFQVAVIAGNFELGELIRNHREQDVVPFQESPKYAARR
RGPPGTGLTVPPALLRANSDTSMALPDWMVFAAPGTSSTGAPGPTSGPQGQAQPAAPSAK
LSSGTLRSASSPRGARARSPSRGRHPEEAKRQPRGRPSSSGTPREGPAGGTGGSGGPGGS
LGSRGRRRKLYSAVPGRSFMAVKSYQAQAEGEISLSKGEKIKVLSIGEGGFWEGQVKGRI
GWFPSDCLEEVANRSQEAKQESRSDKAKRLFRHYTVGSYDSFDAPSLMDGIGPGSDYIIK
EKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGD
FLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMVTRHPDMDEAVHKKAPQQAKRLPPP
TISLRSKSMTSELEEMVSPWKKKSEYEQPPPPVPSMEKKRTVYQMALNKLDEILAAAQQT
ISASESPGPGGLASLGKHRPKGFFTTESSFDPHHRSQPSYERPSYLPPGPGLMLRQKSIG
AAEDDRPYLAPPAMKFSRSLSVPGSEDIPPPPTTSPPEPPYSTPPAPSSSGRLTPSPRGG
PFNPSSGGTHPASSPASFDGPAPPDTRIGSREKSLYHSGPLPPAHHHPPHHHHHHAPPPP
PHHHHAHPPHPPEMETGGSPDDPPPRLALGPQPSLRGWRGGGPSPTPGALSPSHHGSGGG
AGGPSQAPALRYFQLPPRAASAAMYVPARSGRGRKGPLVKQTKVVEGEPQKGGGLTPAPS
PTSPASPQPPPPPPPAAAAPSEKNSIPIPTIIIKAPSTSSSGRSSQGSSTEAEPPSQPEA
AGGGGGSSAPSPAPAVSPVPPSPSPVPTPASPSGPATLDFTSQFGAALVGAARREGGWQN
EARRRSTLFLSTDAGDEDGGDSSLGPGAPPGPRLRHSKSIDEGMFSAEPYLRLESAGASS
GSGYAGYAAGGRAYGGSSAFTSFLPPRPLVHPLTGKALDPASPLGLALAARERALKESSE
GGGPPQPPPRPPSPRYEAPPPTPHHHSPHAHHEPVLRLWGASPPDPARRELGYRAGLGSQ
EKSLPASPPAARRSLLHRLPPTAPGVGPLLLQLGPEPPAPHPGVSKPWRSGAPPEEPERL
PLHVRFLENCQPRAGGAGGRGPPSEDGPGVPPPSPRRSAPPSPTSPRGSEENGLPLLVLP
PPAPSVDVEDGEFLFVEPLPPPLEFSNSFEKPESPLTPGPPHPLPDPPTPTTPLPPVPPP
AVAAAPPTLDSTASSLTSYDSEVATLTQGAPTAPGDPPPPGPPAPAAPAPPAPQPGPDPP
PGTDSGIEEVDSRSSSDHPLETISSASTLSSLSAEGGGGAGAGTGGVGGSGGASVAGGPE
LLDTYVAYLDGQAFGGSGTPGPPYPPQLMTPSKLRGRALGAGGGLRPGPGGGLRDPVTPT
SPTVSVTGAGTDGLLALSGCPGSSTAGVAGGPVAVEPEGPPVPLPSASSLPRKLLPWEEG
PGPPPPPLPGPLAQPQASALATVKASIISELSSKLQQFGGSSAAGGALPWARGGSGGSGD
SHHGGASYVPERTSSLQRQRLSEDSQSSILSKPVSSLFQNWSKPPLPPLPTGTAVSPSAA
AAPGATSPSASSSSTSARHLQGVEFEMRPPLLRRAPSPSLLPASEHKVSPAPRPSSLPIL
PSGPLYPGLFDIRGSPTGGAGGSADPFAPVFVAPHPGMSGGLGGALSGASRSLSPTRLLS
LPPDKPFGAKPLGFWTKFDVADWLEWLGLAEHRARFLDHEIDGSHLPALTKEDYVDLGVT
RVGHRMNIDRALKFFLER
NT seq
6537 nt
NT seq
+upstream
nt +downstream
nt
atgacccacagccccgcgtcaagcgaggacgaggaacgccacagtgccagcgagtgtccc
gaggggggctcagagtccgacagctccccagacgggcccgggagaggcccccgggggacc
cggggccggggcagcggtgcagctggtagcctggcctccatccgaggcctccagggccgc
tccatgtccgtcccagacgacgcccacttcagcatgatggtttttaggatcggcatccct
gacctccaccagacaaaatgcctgcgcttcaacccggatgccaccatctggaccgccaag
cagcaggtgctctgcgccctgagcgagagcctccaggacgtgctcaactatggcctgttc
cagccagccacctcgggccgggacgccaacttcctggaggaagagcggctgctgcgggag
tacccccagtccttcgagaagggggtgccctacctggagttccgatacaagacccgtgtt
tacaagcagaccaacctggatgagaagcagctggccaagttgcacacgaagacggggttg
aagaagttcctggagtacgtgcagctcgggacatccgataaggtggcacggctgctggac
aaggggctggaccccaattatcacgactcggattcaggagagacccccctgacgctggct
gcccagaccgaaggctccgtagaggtgattcgaaccctgtgcctgggcggggcacacatc
gacttccgggcccgggatggcatgaccgcgctacacaaggctgcctgtgcccgccactgc
ctcgctctgacggcactcctggatcttgggggctcccccaactacaaggaccgccgaggg
ctgactcccctgttccacacggctatggtggggggtgacccccgctgctgtgagctgctc
ctgtacaacagggcccagctgggcatagctgatgagaacggctggcaggagattcatcag
gcctgccagcggggtcattctcagcatctggaacatctgcttttctatggagctgagcct
ggtgcccagaacgcctcggggaacacggccctgcacatctgtgccctctacaataaggag
acgtgtgctaggatccttctctatcgaggggccaacaaggatgtcaagaataacagtgga
cagacccccttccaggtggcagtgatcgctgggaattttgaacttggggagctgatccga
aaccatcgagaacaggacgtggtgcccttccaggagtcccccaagtatgcagcccggcgc
cggggacccccgggcacagggctgacggtgccccccgcgctgctgcgggccaacagtgat
accagcatggccctgcccgactggatggtgttcgccgccccggggacctcgtccacgggg
gcccccggccccacctcagggccccagggccaggcacagcccgccgcccccagtgccaag
ctcagcagcgggaccctgcggagtgccagcagcccccggggcgcccgggcccgctcccca
tcccgcgggaggcaccccgaggaggccaagcgtcagcctcgtggacggcccagctccagc
gggacaccccgggaagggccggccgggggcacggggggctccgggggccccgggggctcc
ctgggcagccgcgggagacgcaggaagctctactcagccgtccctggacgctccttcatg
gccgtgaagtcctaccaggcccaagccgagggggagatctccctgagcaaaggcgaaaag
atcaaagtgcttagcatcggggaaggaggcttctgggaaggccaggtcaaaggtcgcatt
ggctggttcccctctgactgcctggaagaggtggccaaccgctcccaggaagcaaagcaa
gaaagccgaagtgacaaggcaaagagactcttccggcattataccgtgggctcctacgac
agctttgatgccccaagcttgatggatgggattggcccagggagcgattacatcatcaaa
gagaagacagttctgctgcagaagaaggacagtgaggggtttgggttcgtgctccggggg
gccaaggcgcagacccccatcgaggagttcacccccaccccagccttcccggcactgcag
tatctggagtcggtggacgagggcggtgtggcatggcgggctggactgcgaatgggagac
ttcctcatcgaggtgaatgggcagaacgtggtgaaggtcggccaccggcaggtggtgaac
atgatccgccaagggggcaacacgctgatggtcaaggtggtgatggtcaccaggcacccg
gacatggatgaagctgttcataagaaagcgccccagcaagctaagcggctcccgccccca
accatctccttgcgttccaagtctatgacttccgagctggaggagatggtctccccctgg
aagaagaagagtgagtacgagcagccgccgccgccggtgcccagcatggagaaaaagcgg
accgtgtatcagatggctctcaacaaactggatgaaatcttggcggcagctcagcagacc
atcagtgcaagcgagagtcctgggcctggtggcctggcttccctgggcaaacaccgaccc
aaaggcttctttaccactgagtcaagctttgatccccaccaccgctcccagccaagttac
gaacgtccttcctacctgcctcctggacccgggctcatgctccggcaaaaatctattggg
gctgcagaagacgatagaccctacctagcacccccagccatgaagttcagccgcagtctg
tctgtgcctggttcggaggacatccccccgccgcccaccacgtccccaccagagcccccc
tacagcacacctccagccccgtcctcctctggccgcctcactccctctccccggggtggg
cccttcaaccccagctcaggtggcacccacccggcctcatccccggcgtccttcgatggg
cccgccccccctgacacccggatagggagccgagagaagagcttgtatcacagcgggccc
ctgccccctgcccatcaccacccgccccaccatcaccaccaccacgccccgccccccccg
ccccaccaccaccacgcccacccgcctcaccccccggagatggagaccggcggctccccc
gacgaccccccaccccgcctggctctggggccccagcccagcctgcgaggctggcggggc
ggcgggcccagcccgaccccgggggccctgtccccgtcgcaccacggcagcgggggcggc
gcgggcggcccctcccaggccccggcgctgcgctacttccagctgcctcctcgggcggcc
agcgcggccatgtacgtgcccgcccgttccggccgcgggcgcaagggcccgctggtcaag
cagaccaaagtcgtcgaaggcgagccccagaagggcggcggcctcacgcccgccccctcg
cccacgtccccagcgtccccgcagccgccgccgccgccgccgccggccgcggccgccccg
tcggaaaagaactccatccccatccccaccatcatcatcaaggcgccgtccaccagtagc
agcggccgcagcagccaggggagcagcaccgaggcggagcccccgagccagcccgaggcc
gcgggcggcggcggcggctcttccgcgcccagccccgccccggccgtgtcgcccgtgccg
ccgtccccctcgcccgtgcccacccccgcctcgcccagtggcccggccaccctggatttc
accagccagttcggagcggccctggtgggggcggctcggagggaagggggctggcagaac
gaagcccgccggcgatccacgctcttcctctccaccgatgcgggcgacgaggacggcggc
gacagctcgctgggcccaggggcgcccccgggcccccggctgcgccactccaagtccatc
gacgaaggcatgttttcggccgagccctacctccggctggagtcggcgggtgccagcagc
ggcagcggctacgcgggctacgcggccgggggccgagcctacgggggcagcagcgccttt
accagcttcctgccgccgcgacccctggtccacccgctgaccggcaaggccctggacccg
gcctccccgctcgggctggccctggccgcccgggagcgggcgctgaaggagtcctcggag
ggcggtgggcccccccagccccctccaaggcccccatcgccccgctacgaggccccgccg
cccaccccacaccaccactcgccccacgcccaccacgagccagtgctgcgcctctgggga
gcctcgcccccggacccggcccgccgggagctggggtaccgggcagggctgggcagccag
gagaagtcccttccggccagccctccggcggcccgacgctccttgctgcaccgcctgcct
cccacagctcccggggtcgggcccctcctgctgcagctggggcccgagccccccgccccg
caccccggggtgagcaagccctggagatccggcgcccccccggaggagcccgagcggctg
cccctccacgtgcggttcctggagaactgccagccccgggccgggggggcgggtggaagg
ggacccccctcggaagacgggccgggggtcccgccgcccagtccgcgccgctcggcgccg
ccctcgccgacctccccgcggggcagtgaagagaacgggctccccctgctggtcctgcca
ccgcccgccccctcagtggacgtggaagacggcgaattcctctttgtggaaccgctgccc
ccacccctcgagttttccaatagcttcgagaagccggagtcgcccctcacgcccgggcct
ccccacccgctgccggacccacccaccccgaccacccccttgccccctgtgccacccccg
gccgtggcagccgcccctcccaccctggactcaaccgcatccagcctgacttcctatgat
agcgaggtggcaacgctgacccagggggcccccacggctcccggggacccccctccgcca
ggccctccagccccagccgccccggctcccccagccccccaacctggcccagaccctccg
ccgggcacggattctggtattgaggaggtggacagtcggagcagcagcgaccaccccctg
gagaccatcagcagcgcctccacgctgagcagcctgtccgctgaaggcgggggcggcgca
ggggctggaaccgggggcgtcggaggcagtggcggcgccagcgtggccggtgggccggag
ctcctggacacctacgtggcctacttggacggccaggccttcgggggcagcggcactcct
ggccccccgtaccccccgcagctcatgactccctctaagctccggggccgggcgcttggg
gccggaggaggcctgcggccgggccccggcgggggactccgagaccctgtcactcccacc
agccccactgtctctgtgacgggggcgggaaccgatgggctgctggccctcagcggttgc
ccgggatcctcgacggcaggcgtggctggcggccctgtagctgtagagccggaaggtccg
ccagtgcccttgccgtcggcctcctccctgcctcggaagctgctgccatgggaggagggc
ccgggcccgccgccgcccccgctgccggggcccttagcccagcctcaggcctcagccttg
gccactgtaaaagccagcatcatcagtgaactcagctccaagcttcaacagtttgggggc
tcctcggcagctggtggcgctctgccctgggcccggggaggcagcgggggaagcggggac
agccaccacgggggagccagctacgtcccggagcggacttcctccctgcagcggcagaga
ctctccgaagactcccagtcctcgatcctctccaaacctgtgagcagcctgtttcagaac
tggtccaaaccacctctgccaccactccccacaggaaccgcggtgtccccttcagccgct
gcagccccgggggccacctccccatccgcttcctcctcctccacgtccgcccgccacctc
cagggcgtggagttcgagatgcgcccacctttgctccgccgggcccccagcccctcgctg
ctgcccgcctcggagcacaaggtcagccctgcgccccggccctcgtccctccctatcctg
ccttccggacccctctacccgggcctctttgacatccgcggctcccccaccggaggagca
ggaggctcggccgaccccttcgcccccgtctttgtggcgccccaccccgggatgtccggg
ggtctcggcggggccttgtcaggggcctcccgctccctctcaccgacccgcctgctttcc
ctgcccccggacaagccgttcggcgctaaacctctgggcttctggaccaagttcgatgtg
gctgactggctagagtggctgggcttggccgaacaccgagcccggttcctggaccacgag
atcgatggctcccacctgcccgccttgaccaaggaggactacgtcgatttgggggtgacc
agggtgggacaccgcatgaacatcgaccgggctctcaagtttttcctggagaggtga
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