Odocoileus virginianus (white-tailed deer): 110136101
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Entry
110136101 CDS
T10722
Symbol
PCDH9
Name
(RefSeq) protocadherin-9 isoform X1
KO
K16498
protocadherin delta 1
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr03273
Virion - Lassa virus and SFTS virus
Brite
Protein phosphatases and associated proteins [BR:
ovr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
110136101 (PCDH9)
Cell adhesion molecules [BR:
ovr04515
]
Cadherins
Protocadherins
110136101 (PCDH9)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
110136101
NCBI-ProteinID:
XP_070327695
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Position
8:65991147..67082123
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AA seq
1272 aa
AA seq
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MDLRDFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSA
SLVYRLVSKAGDAPLVKVSSSTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPN
DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYE
LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQV
TVSDVNDNKPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATK
RLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDL
RYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL
LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSE
NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIF
TVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDAD
AGENKAVTLSILNDNDNFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGGKPPRSSTAK
VTINVMDVNDNSPVVISPPSNTSFKLVPLSAIPGSVVAEVFAVDIDTGMNAELKYTIVSG
NNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTAGN
ASYIYDLIRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIVAGAMVVIVVIFVTVLVRCRH
ASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPDDAVHEPI
NGTISLPAELEEQGIGRFDWGPAPPTTFKPNSPDLAKHYKSASPQPAFHLKPDTPVSVKK
HHVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGPLHTRQCNSHNKSD
NIPVTPQKCPSSAGFHIQENEEGHYESQALVGRSVQSLSKRQSLLGKTAESSPTGDRRGG
HSQRRVTFHLPDGSQESCSDSGLGDHEPVGSGTLISHPLPLVQPQDEFYDQASPDKRTEA
DGNSDPNSDGPLGPRGLAEATEMCTQECLVLGHSDNCWMPPGLGPYQHPKSPLSTFAPQK
EWIKKDKLVNGHTLTRAWKEESNRNQFNDRKQYVSTEGHFNNGSHMADIPLANLKSYKQA
GGAIESPKEHQL
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagggatttttacctgttggctgctctgattgcctgtttaaggctggattcc
gcaatagctcaagaacttatttacactattagagaggaattgcctgaaaatgtgcccata
ggaaacataccaaaggatctgaacatttctcacatcaatgctgccacagggaccagcgcc
agccttgtctacagactggtttctaaagctggggatgcccctttggtgaaagtatccagt
agcactggggaaattttcacaacctccaatagaatagacagagaaaaactctgtgctgga
gcctcttatgctgaggagaatgagtgtttctttgaacttgaggtggtgatcctccccaat
gattttttcaggctgatcaaaataaaaataattgtcaaggataccaatgataatgccccc
atgtttccatctcctgtcatcaatatttccatcccagaaaacactttgatcaacagccgc
tttccaattccatcagcaacagatcctgacacaggcttcaatggtgtacagcattatgaa
ttgttaaatgggcagagtgtttttggactggatatcgtggaaactccggaaggagaaaag
tggccgcaattgattgttcagcaaaacttggacagagaacagaaagatacctatgtgatg
aaaatcaaagtagaggatggaggcaccccacaaaagtccagcaccgccatcctgcaggtc
acagtaagtgatgtcaatgacaacaaaccagtatttaaagagggccaggtggaggtgcac
attccagagaatgctcctgtgggcacctctgtaattcagctccatgccactgatgcagat
ataggcagtaatgctgaaatccggtacatttttggtgcccaggtcgcgcctgcaaccaaa
agactctttgctttaaataatactactgggctgattacagttcagaggtccttagaccga
gaggagacggccattcacaaagtgacagtactggctagtgatggcagctctactcctgct
agagcaacagttaccatcaatgtcactgatgtaaatgacaaccctccgaacatagacctc
aggtacatcataagtcccatcaatggcaccgtgtatttgtctgagaaagatcctgtcaat
acaaagattgccctcattacagtttcagataaggacacagatgtgaatggcaaagtgatc
tgttttattgaaagagaggtcccatttcatttgaaggcagtatatgacaaccaatatttg
ttagagacctcttctttgttggactatgagggcaccaaagaattcagctttaaaatcgtt
gcctctgattctgggaagcccagtttaaatcaaactgctctggtaagggttaagcttgag
gacgaaaatgacaacccaccaattttcaaccagcctgtaattgagctgtcagtttctgaa
aacaaccgacgtgggttatacttaacaactattagtgccacagatgaagacagtgggaaa
aatgcagatattgtttatcagcttgggccgaatgcctccttctttgatctggaccgaaag
acaggagttttgacagcctctagagtctttgacagagaagaacaagaacgattcattttt
acagtaactgccagggacaatgggacccctcccctccaaagtcaagcggctgtgatagtt
accgttctggatgagaatgacaatagccccaagtttactcataaccattttcaatttttt
gtgtctgagaatctgccaaagtatagtactgtgggggtaatcacagtgacagatgcagat
gctggagagaataaagctgtgactctttccattctaaatgacaatgataattttgtgttg
gatccctattccggagtcataaagtcaaatgtctcatttgacagagagcagcagagttcc
tacacttttgatgtcaaagccactgatgggggaaaaccaccccgttcctctaccgcaaaa
gtaactataaatgtcatggatgtcaatgacaatagccctgttgttatttcaccgccttct
aatacttcttttaagttggtgcctctctcagccattcctggctcagtggtagcagaagtt
tttgcagtggatattgacactgggatgaacgctgaacttaagtatacaattgtgagtggt
aacaacaaaggcttgtttcggattgatccggtaacaggcaacatcaccctggaagaaaag
ccagcaccaactgatgtgggcttgcaccgattggtggtcaacataagtgacttggggtac
cccaagtctctgcacaccctcgtacttgttttcctttatgttaatgacaccgcgggcaat
gcttcctatatctatgacttgattcgcaggactatggagaccccgttggacagaaacata
ggggatagcagccaaccctatcaaaacgaggactatctcaccatcatgatcgccatcgtc
gcaggcgccatggtggtcatcgtcgtgatctttgtcaccgtgctggtgcgctgtcgccac
gcatcaagattcaaagcagctcaaaggagcaagcaaggtgccgaatggatgtccccaaac
caggagaacaaacagaacaagaaaaagaaaaggaagaaacgaaaatctcccaagagctct
cttttgaactttgtcaccatcgaagagtccaagcccgacgatgcagttcacgaacccatc
aatgggacaataagcctgccggctgagctggaggagcagggcataggaagatttgactgg
ggcccggcccctccaaccaccttcaagcccaacagccctgacctggccaagcactacaag
tccgcttctccgcagcccgctttccatcttaaaccagacactccggtttcggtgaaaaag
catcacgtgattcaggagctgccgttggacaacacctttgtcgggggttgtgacaccctt
tccaaacgctcttccactagttcagatcacttcagtgcctcagagtgcagttcccaaggc
ggcttcaagacaaagggccccttacacaccagacagtgtaactcacacaacaaaagtgac
aatattcctgtcactcctcagaaatgtcccagctctgcgggtttccatattcaggagaat
gaagaaggccattacgagagccaagccttggtggggaggtctgtccagtccttgagtaag
aggcaaagtttgttaggaaagacagctgaaagcagcccgactggggacagaagaggaggc
cattcgcagcgccgggttacctttcacctccccgacggctcccaggaaagctgcagtgac
agtggtcttggagaccatgagccggtgggtagtggaaccctgatctcacaccctcttcct
ctggttcagccacaggacgaattctatgaccaggcctctccggacaagaggaccgaagca
gacggcaactctgaccccaactctgatgggcctctgggcccccgaggattagctgaagct
acagagatgtgcactcaagagtgcttggttttgggtcactctgataattgctggatgcct
cctggcttgggtccatatcaacaccctaaatctcctctctcaacctttgcaccccaaaaa
gaatggatcaagaaggacaagcttgtgaatgggcacaccctgaccagagcctggaaagaa
gagagcaacaggaaccagttcaatgaccgtaagcagtatgtctccactgaaggccatttc
aacaatggcagccacatggcagacattcctttggcaaatctgaagtcttataagcaagca
ggaggtgctattgagagtcctaaggagcaccaactctaa
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integrated database retrieval system
