Odocoileus virginianus (white-tailed deer): 110136226
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Entry
110136226 CDS
T10722
Symbol
SF1
Name
(RefSeq) splicing factor 1 isoform X3
KO
K13095
splicing factor 1
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110136226 (SF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ovr03041
]
110136226 (SF1)
Spliceosome [BR:
ovr03041
]
Complex A
Other components
Complex A specific factors
110136226 (SF1)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
zf-CCHC_5
zf-CCHC_3
KH_NusA_1st
Motif
Other DBs
NCBI-GeneID:
110136226
NCBI-ProteinID:
XP_020747432
UniProt:
A0A6J0XC71
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Position
28:complement(36905325..36919233)
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AA seq
639 aa
AA seq
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MATGANATPLDFPSKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYIVQLQIED
LTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREFRTRKKLEEERHNLITEMVALN
PDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGK
GSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILKQGIETPEDQNDLR
KMQLRELARLNGTLREDDNRILRPWQSSETRSITNTTVCTKCGGAGHIASDCKFQRPGDP
QSAQDKARMDKEYLSLMAELGEAPVPASVGSTSGPATTPLASAPRPAAPANNPPPPSLMS
TTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGP
PPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPP
PPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGS
IPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPPPPPGSAGMMYAPP
PPPPPPMDPSNFVTMMGMGVAGMPPFGMPPAPPPPPPQN
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaggagcgaacgctacgccgctggacttccccagtaagaagcggaagaggagc
cgctggaaccaagacaccatggaacagaagacggtgattccaggaatgcctacagtcatc
ccccctggacttactcgggaacaagaaagagcttatatagtgcaactgcagatagaagac
ctgactcgtaaactgcgcacaggagacctgggcatcccccctaaccctgaggacaggtcc
ccttcccctgagcccatctacaatagtgaggggaagaggcttaacactcgcgagttccgt
acccgcaagaaacttgaggaggaacggcacaatctcatcaccgaaatggttgccctcaac
cctgatttcaagccacctgcagattacaaacctccagcaacacgtgtgagtgataaagta
atgatcccacaagatgagtatccagaaatcaattttgtggggctgctgattgggccaaga
gggaacaccttgaagaacatagagaaggagtgtaatgccaagatcatgatccgggggaag
ggttctgtgaaagaaggaaaagttgggcgcaaagatggccagatgctgccaggagaagat
gagccgcttcacgccctggtcactgccaataccatggagaatgtgaagaaagccgtagaa
cagataagaaacatcctgaagcagggtatagagacccctgaggaccagaacgacctacgg
aagatgcaacttcgagagttggctcgcttgaatggaacccttcgggaagatgataacagg
atcttaagaccttggcagagctctgagacccgcagcattaccaataccacagtgtgtacc
aagtgtggaggggctggccacattgcttccgattgcaagttccaaaggcctggtgacccc
cagtcagctcaggataaagcacggatggataaagagtacttgtccctcatggctgaactg
ggggaggcccctgtgcccgcatctgtgggctccacatctgggcctgctaccacaccactg
gccagtgcacctcggcctgctgctcctgccaacaacccacctccaccgtctctcatgtcc
actacccagagccgcccaccctggatgaattctgggccatcagagagtcggccctaccat
ggcatgcacggaggtggccctggtgggcccggaggtggcccccacagcttcccacacccg
ctacccagcctcacaggtgggcatggtggacatcccatgcagcacaaccctaacggaccc
ccgcccccgtggatgcagccgccgccgccaccgatgaaccagggcccccacccacctggg
caccatggccctcctccaatggatcagtacctgggaagtacgcctgtgggctctggggtc
tatcgcctgcatcaaggaaaaggtatgatgccgccgccacctatgggcatgatgccgccg
ccgccgccgcctcccagtgggcagcctccgccccctccctctggtcctcttcccccatgg
caacagcagcagcagcagcctccgccaccccctccgcccagcagcagtatggcttccagt
acccccttgccatggcagcaaaatacgacgactaccaccacgagcgctggcacagggtcc
atcccgccatggcaacagcagcaggcggctgccgcagcttctccaggagcccctcagatg
caaggcaaccccactatggtgcccctgcccccaggggtccagccgcctctgccgcccggg
gcccctccccctccgccgcctccgccgcctggttccgccggcatgatgtatgccccgccc
cctcctcctccgcctcccatggacccttctaactttgtcaccatgatgggcatgggggtg
gcgggcatgccacccttcgggatgcctccagctcccccaccgcctccaccacagaactag
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