Odocoileus virginianus (white-tailed deer): 110136259
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Entry
110136259 CDS
T10722
Symbol
L1CAM
Name
(RefSeq) neural cell adhesion molecule L1 isoform X2
KO
K06550
L1 cell adhesion molecule
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr04360
Axon guidance
ovr04514
Cell adhesion molecule (CAM) interaction
ovr04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
110136259 (L1CAM)
04517 IgSF CAM signaling
110136259 (L1CAM)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
110136259 (L1CAM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ovr04515
]
110136259 (L1CAM)
04090 CD molecules [BR:
ovr04090
]
110136259 (L1CAM)
04091 Lectins [BR:
ovr04091
]
110136259 (L1CAM)
Cell adhesion molecules [BR:
ovr04515
]
Immunoglobulin superfamily
L1 family
110136259 (L1CAM)
CD molecules [BR:
ovr04090
]
Proteins
110136259 (L1CAM)
Lectins [BR:
ovr04091
]
I-type lectins (Siglecs)
110136259 (L1CAM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
Ig_2
ig
Bravo_FIGEY
Ig_VEGFR-1-like_5th
V-set
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
C2-set_2
Ig_5
Ig_PDGFR_d4
Fn3_VIN3
Fn3_ROS1
Ig_C17orf99
Ig_VSIG10L2_N
BiPBP_C
Fndc10
Motif
Other DBs
NCBI-GeneID:
110136259
NCBI-ProteinID:
XP_020747497
UniProt:
A0A6J0XCD1
LinkDB
All DBs
Position
Unknown
AA seq
1343 aa
AA seq
DB search
MPTGPCLWDLESHIGRTGTEKPVAGPGERMGQQVGGAGEAAGEGDTAIRKGMKGELEAQT
LLVSSRHPPATLPSGLSFSRARPALPRRAAGASGKMAMALRYLWPLLLCSPCVLIQIPEE
LMEPPIITEQSPRRVVVFPTDDVSLKCEASGKPEVNFRWTRDGVLFKPREELGVTVNQAP
HSGSFSITGNSSNFAQSFQGTYRCFASNKLGTAMSHEIQLMAEGTPKWPKETVKPVEVEE
GESVILPCHPPPSAEPLRIYWMNSKILHIKQDERVTMGQNGNLYFANVLTSDNHSDYICH
AHFPGTRTIIQKEPIDLRVKATNSMMDRKPRLLFPTNSSSHLVALQGQPLVLECIAEGFP
TPTIKWLRPSGPMPADRVTYQNHNKTLQLLNVVEEDDGEYRCLAENSLGSDRHAYYVTVE
AAPYWLHKPQSHLYGPGETARLDCQVQGRPQPEVTWRINGIPVEELGRDQKYRIHHGALV
LSNLQPSDTMVTQCEARNRHGLLLANAYIYVVELPAKILTPDNETYMAVQGSTAYLLCKA
FGAPVPSVQWLDRDGKTVLQDERFFPYANGTLGIRDLQANDTGHYFCQAANDQSNMTIVA
NLQVKDATRIMQGPRSAIEKRGSRVMFTCRASFDPSLQHSTTWRRDALDLQELGDSDKYF
IEDERLVIHSLDYSDQGNYSCVASTKLDMVESRAELLVVGSPGPVPQLELSDRHLLKQSQ
VRLSWSPADDHNAPIEKYDIEFEDKEMAPEKWYSLGKVPGNQTSTTLKLSPYVHYTFRVT
AINKYGPGEPSPASETVVTPEAAPEKNPVDVKGEGNETNNMVITWKPLRWMDWNAPQVQY
RVQWRPQKMQGAWQEQIVSDPFLVVSNTSTFVPYEIKVQAVNSQGKGPEPQITIGYSGED
YPQASPLLEPVEALNSSTVLVRWQSVDPALVKGHLRGYNVTYWWEGSQRKHSKRHIHKGH
VVVPANATSAILGGLRPYSSYRLEVQAFNGRGLGPASRVTFNTPEGVPGHPESLHLECQS
DTSLLLHWQPPLSHNGVLTGYVLSYQPLNDGSKEQLSFDLPDPELRTHNLTNLSPRLRYR
FQLQATTKEGPGEAIVREGGTMALSGMPDFGNISAMAGENYSVVSWVPKEGQCNFGFQIW
FKALGDEKLVARLPPQYVSYNQSSYTQWDLQPDTDYEIQLLKEQVLLHQMAVKTNGTGRV
RLPPTGFATEGWFIGFVSAIVVLLLVLLILCFIKRSKGGKYSVKDKEDTQVDSEARPMKD
ETFGEYSDNEEKAFGSSQPSLNGDIKPLGSDDSLADYGGSVDVQFNEDGSFIGQYSGKKE
KEAAGGNDSSGATSPVNPAGTLE
NT seq
4032 nt
NT seq
+upstream
nt +downstream
nt
atgcccacaggcccctgcttatgggaccttgagtcacacatcgggaggacgggcacagag
aagcctgtggcaggcccaggggagcggatggggcaacaagttggtggtgccggagaggca
gctggtgaaggagacacggccatcaggaagggaatgaaaggcgaactggaggcccagact
ctgctggtctcttccaggcacccaccagccacccttccctccggcctgagctttagccga
gcccggccggctttgccgcgccgagccgccggcgcctccgggaagatggccatggcgctg
cggtacttgtggcctctcctcctctgcagcccttgcgtgctcatccagatccccgaggaa
ttgatggaaccccccatcatcacggagcagtctccccggcgtgtggtcgtcttccccaca
gatgacgtcagcctcaagtgtgaggccagcggcaaacccgaagtgaactttcgctggact
cgggatggcgtcctcttcaaacccagagaggaactgggcgtgaccgtgaaccaggcaccc
cattctggctccttcagcatcacgggcaacagcagcaacttcgcccagagcttccagggc
acctatcgctgctttgccagcaacaagctgggcactgccatgtcccacgagatccagctc
atggctgagggtacccccaagtggccaaaggagacagtgaaacctgttgaggtcgaggaa
ggggagtcggtgattctcccttgccacccgccccccagtgcagagccgctccggatctac
tggatgaacagcaagatcttgcacatcaaacaggatgagcgggtgaccatgggccagaat
ggcaacctctactttgccaacgtgctcacctcagacaaccactcagactacatctgccat
gcccacttccctggcactcgaaccatcattcaaaaggaacccattgacctccgggtcaaa
gccaccaacagcatgatggacagaaagccacgcctgctcttccccaccaactctagcagc
cacctggtggccctgcaggggcagcccttagtcttggagtgcatcgctgagggattcccc
acgcccaccatcaagtggctgcgcccaagcggccccatgccagccgaccgggtcacctac
cagaaccacaacaagacgctgcagttgctgaacgtggtcgaggaggatgacggcgagtac
cgctgcctggctgagaactcgctgggcagtgaccgccacgcctactacgtcaccgtggag
gctgcgccatactggctacacaagccccagagccatctgtacgggccaggggagactgcc
cgcctggactgtcaagtgcagggcaggccccaaccggaggtcacctggagaatcaacggg
atccctgtggaggagctgggcagggaccagaagtaccggatccaccatggagccctggtc
ctgagcaacctgcagcccagtgacactatggtgacccagtgtgaggcccgcaaccgccac
gggctcctgctggccaatgcctacatctatgttgtggagctgccggccaagatcctgacc
ccagacaatgagacatacatggcagtccaaggcagcaccgcctaccttctgtgcaaggcc
ttcggagcccctgtgcccagcgtccaatggctggacagggacggaaagacagtgctgcag
gacgagcgcttcttcccctatgccaatgggaccctgggcatccgagacctccaggccaat
gacactgggcactacttctgccaggctgctaacgaccaaagcaacatgaccattgtggct
aacctgcaggtcaaagatgccactcggatcatgcaggggccccgcagtgcaatcgagaag
agaggctcccgagtgatgttcacgtgccgggcctcctttgacccctccctgcagcacagc
accacctggcgcagggatgctctcgacctgcaggagctgggggacagtgacaagtacttc
atagaagacgagcgcctggtcatccacagcctggactacagcgaccagggcaactacagc
tgcgtggccagtaccaagctggacatggtggagagccgggcagagctgctggtggtgggg
agccccggacccgtgccccagctggagctgtctgatcgccacctgctgaagcagagccag
gtgcgcctgtcttggagcccggctgatgaccacaatgcccccattgagaagtatgacatt
gaatttgaggacaaggagatggcgcctgagaagtggtacagcctgggcaaggtgcccggg
aaccagacctccaccaccctcaagctgtcgccttatgtccactatacctttcgagtcact
gccatcaacaaatacggccctggggagcccagcccagcctctgagactgtggtcacaccg
gaggcagccccggagaagaaccccgtggacgtgaagggggaaggaaacgagaccaacaac
atggtcatcacttggaagccgctacggtggatggactggaatgccccccaggttcagtat
cgagtgcagtggcgcccccagaagatgcagggggcctggcaggaacagatagtcagtgac
cccttcctggtggtgtccaatacatctacttttgtgccgtatgagatcaaagtccaggcc
gtcaacagccagggcaagggccccgagccccagatcaccatcggctactctggggaggac
tacccccaggcaagccctctgctggaacctgtcgaggccctcaattcaagcactgtgctg
gtcaggtggcagtctgtggacccagccctggtcaagggccacctccggggatacaatgtg
acatactggtgggaaggcagtcagaggaagcacagcaagaggcacatccacaaaggccac
gtggtggtgccagccaatgccaccagtgccatcctgggaggcctgcggccctacagctcc
taccggctggaagttcaggcctttaatgggcggggactggggcctgccagcagggtgacc
ttcaacacccctgagggagtgcctggacaccccgagtcgttgcacctggagtgccagtca
gacaccagcctgctgctgcactggcagcctccactcagccataacggcgtgctcacgggc
tacgtgctctcctaccaacctctgaacgacgggagcaaggagcagttgtcctttgacctt
ccggaccctgagctgcggacacacaacctgaccaatctcagcccccgcttgcggtaccga
ttccagctgcaggccactacgaaggagggcccgggggaggcgattgtgcgggaaggaggc
accatggccttatctggaatgccggactttggcaacatctccgccatggctggcgagaat
tacagcgtggtctcctgggtccccaaggagggccagtgcaacttcgggttccagatctgg
ttcaaagccctgggggacgagaaactggtggctcgtctcccgccacaatacgtcagctac
aaccagagctcctacacgcagtgggaccttcagcctgacactgactatgagatccagctg
ctcaaggagcaggtgctcctgcaccagatggcggtgaagaccaacggcactggccgagtg
agactgcctcccactggctttgccaccgagggctggttcatcggctttgtcagcgccatc
gtcgtcctgcttcttgtcttactcatcctgtgcttcattaagcgcagcaagggtggcaag
tactcggtgaaggacaaggaggacacccaggtggactcggaggcccggcccatgaaggac
gaaaccttcggagagtacagtgacaacgaggagaaggcctttggtagcagccagccatca
ctcaacggagacatcaagcccctgggcagtgatgacagcctagccgactacggaggcagc
gtggatgtccagttcaatgaggatggctccttcatcggccagtacagcggaaagaaggag
aaggaggcagcagggggcaatgacagctccggggccacatcccctgtcaaccctgccggg
accctggagtag
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integrated database retrieval system
