Odocoileus virginianus (white-tailed deer): 110136397
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Entry
110136397 CDS
T10722
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X2
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr03250
Viral life cycle - HIV-1
ovr04623
Cytosolic DNA-sensing pathway
ovr05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
110136397 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
110136397 (SAMHD1)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
110136397 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ovr03400
]
110136397 (SAMHD1)
DNA repair and recombination proteins [BR:
ovr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
110136397 (SAMHD1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
HD_assoc_2
SAM_2
PDEase_I
Motif
Other DBs
NCBI-GeneID:
110136397
NCBI-ProteinID:
XP_020747736
UniProt:
A0A6J0XFH4
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Position
9:complement(61413429..61475548)
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AA seq
613 aa
AA seq
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MQSADSQNPPKRSRRDGSPKTPPNSPPADAETSPSHDLHPDHRTWGPKQVCSFLRLCGFS
DSELLKRCREKKMTDSLLPFLDESHPEDLEISSCGKKMKLLNCIQHTMKVINDPIHGHIE
FHPLLIRIIDTPQFQRLRYIKQLGGGYYVFPGASHNRFEHSLGVGYLAGRLVRELSEKQP
ELQISERDILCVQIAGLCHDLGHGPFSHMFDGRFIPLARPGMKWTHEQGSVMMFEHLINS
NGLRDVMKHYGLIPEEDILFIKEQITGPPASPIKDSSKWLYKGRPKEKSFLYEIVANKRN
GIDVDKWDYFARDCHHLGIQNNFDYKRFIKFARVCEVDNMKHICTREKEVGNLYDMFYTR
NCLHRRAYQHKVGNIIDTMITDAFLKADPYIEILGSEGKNYHISTAIDDMEAFTKLTDNI
FLEILYSTDPRLEAARTILKKIESRNLYKFVGETQPMKQRIQKEDYKHLPKEVASAKPSD
VQLEAELKAEDLIVDVINMDYGMEDKNPIDHVRFYCKSDLSKAIMITRDQVSQFLPGRFA
EQLIRVYCKKTDEKTLFAARQHFVHWCLINDFTKPQDGDVVAPLITPRKLEWNTAGIQEG
SKVKTQLFPDDSM
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgcagagtgccgactctcagaatccccccaagcggtcccggcgcgacggcagcccgaaa
acgccgccaaactcccctcccgcagacgcagagacgtccccgagccacgacctgcacccg
gaccaccgaacctggggcccgaagcaggtgtgctccttcctaaggctctgtggcttcagc
gattcggaactgctgaaacgctgccgagagaagaaaatgacagattcattactgcccttt
cttgatgagtcacatcctgaagatcttgaaataagttcctgtgggaagaaaatgaagctg
cttaattgtatccaacatacaatgaaggtgattaatgatcctatccatggccacattgaa
tttcaccctctcctcatccgaatcatcgacacacctcaatttcagcgcctgcgatacatc
aagcagttgggaggcggttactatgtttttccaggagcgtcacacaatcgatttgagcac
agtctaggtgtggggtatctagcaggacgtctagttcgtgaactgagtgaaaaacaacca
gagctgcagataagtgaacgagatatcctctgtgttcagatcgctggtctttgtcatgat
cttggtcatgggccattttctcatatgtttgatggaagatttattccacttgctcgacca
gggatgaaatggacgcatgaacagggctcagttatgatgtttgagcacctcatcaattct
aacgggctccgagatgtcatgaaacactatggtctcatccctgaagaagatattttgttt
atcaaggaacaaattacaggaccacctgcatcacccatcaaagattcttcaaagtggctc
tataaagggcgtcctaaagaaaaaagcttcctttatgagatagtggccaataaaagaaat
ggcattgatgtggacaaatgggattattttgccagggactgccatcatcttggaatccaa
aataactttgattacaagcgctttattaagtttgcccgtgtctgtgaagtagataatatg
aagcatatttgtactagagaaaaggaggttggaaacctgtatgacatgttctatacacgc
aactgtttgcaccgcagagcttatcaacacaaagttggcaacatcattgatacaatgatt
acagatgccttcctcaaagcagatccttacatagagatattaggttctgaaggaaaaaat
taccacatttctacagcaattgatgacatggaagccttcactaagctgacagataacatt
tttctggagatcttatactccactgatcccagattggaggctgcacgaacgattttaaag
aaaattgaatcccgtaatctatacaagtttgtgggtgagactcagcccatgaaacaaaga
attcaaaaggaagactacaaacaccttccgaaagaggtcgccagtgctaaacccagtgat
gtacagttagaagctgaactgaaggctgaagacttgatagtggatgttatcaacatggat
tatgggatggaagacaagaatcctattgatcatgttcgcttctattgtaagagtgacctc
agcaaggcaatcatgattactagagaccaggtttctcagtttttgccagggagatttgct
gagcagctgattcgagtttactgtaagaagacagatgaaaagactctgtttgctgcacga
cagcatttcgtccattggtgtttaatcaatgacttcaccaagccacaggatggtgacgtt
gtagcgccgcttataacacctcggaaattggagtggaatacagctggcatccaggaaggg
tccaaagtcaaaacccagcttttcccagatgactcgatgtga
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