Odocoileus virginianus (white-tailed deer): 110136916
Help
Entry
110136916 CDS
T10722
Symbol
CNTN6
Name
(RefSeq) LOW QUALITY PROTEIN: contactin-6
KO
K06761
contactin 3/4/5/6
Organism
ovr Odocoileus virginianus (white-tailed deer)
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ovr04515
]
110136916 (CNTN6)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ovr00537
]
110136916 (CNTN6)
Cell adhesion molecules [BR:
ovr04515
]
Immunoglobulin superfamily
Contactins
110136916 (CNTN6)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ovr00537
]
Others
110136916 (CNTN6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
Sp38
Pur_ac_phosph_N
C2-set_3
V-set_CD47
Tissue_fac
Motif
Other DBs
NCBI-GeneID:
110136916
NCBI-ProteinID:
XP_070311754
LinkDB
All DBs
Position
26:complement(22426029..22736454)
Genome browser
AA seq
1030 aa
AA seq
DB search
MRLLWKLVILMSLINISAGDGGLSPPIFIQEPEDAIFPLDLSKSEIILNCAANGYPSPHY
RWKQNGADIDFTMSYHYRLDGGSLAISSPRTDQDIGTYQCLATNSLGTILSQKAKLQFAY
IEDFETKTRSTVSVREGQGVVLLCGPPPHFGDLSYAWTFNDNPLYVQEDNRRFVSQETGN
LYIAKVEPSDVGNYTCFITNKEAQKSVQGPPTPLVQRTDGVMGEYEPKIEVRFPETMQAA
KDSSVKLECFALGNPVPDISWRRLDGSPLPGKVKYSKSQAILEIPNFQQEDEGFYECIAS
NLRGRNLAKGQLIFYAPPQWEQKIQNTYLSIYDSLFWECKASGKPDPWYTWLKNGERLNP
EERIQIENGTLIITMLNVSDSGIYQCAAENKYQIIYANAELRVLASAPDFSKTPLKKYSV
VQVGGDIVIECKPNAFPRATISWKRGIESLRQSKRVFLLEDGSLKIYNVTRSDAGLYTCI
ATNQFGVAKNTGSLIIKERTVITVPPSKMDVTVGESIVLPCQVSHDPSIEVAFVWSFNGD
VIDFKKGVAHFERIGGESVGDLMIRNIQLNHSGKYLCTVKTSLESLSADGDIVVRGPPGP
PEDVRVKHISSATCQLSWRAGSDNNSPIQIFSVQARTPFSVGWQAVSTVPEILNGKTFNA
TVVGLNPWVEYEFRVVAGNSIGIGEPSKPSELLRTKASVPAVAPTNINGGGGSRSELIIT
WESIPEELQNGEDFGYIVMLRPVGSTTWTRERVPSVETSRFIYRNENIIPLSPFEVKVGV
YNKEGEGPLSTVSIIYSGEDEPQLAPRGTSVQSFSASEMEVSWNAIAWNRNTGRVLGYEV
LYWTDDSKESMIGKIRVSGNVTTKNITGLKANTVYFASVRAYNTAGTGPSSPPVNVTTKK
SPPSQPPANIAWKLTNSKLCLNWEHVKTMENESEVLGYKILYRQNRQSKTHILETNNTSA
ELLVPFEEDYLIEIRTVSDGGDGSSSEEIRIPKMSSLSSRGISVLEPSVHFLSVVVTIFV
VLLFSHLYEE
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgaggttgctatggaaactggtaattctgatgtcactcataaacatttctgcaggtgat
ggtggcttgagccctcctatttttatccaggaaccagaagatgctatttttcctttggat
ttgtcaaaatcggaaataattctgaattgtgctgctaatggttacccgtcaccccattat
aggtggaagcaaaatggcgcagatattgattttaccatgagctatcactacaggttggat
ggaggcagtttggcaatcagcagccctcgcacagatcaagatattggcacgtaccagtgc
ctggccaccaattctctgggaacaattctgagtcagaaggcaaagctccaatttgcatat
atcgaagactttgaaaccaaaacaagaagcacagtgtccgtccgagaaggtcagggtgtg
gtgcttctctgcggcccacccccacactttggagatttatcttatgcatggaccttcaat
gataaccccttatatgttcaagaggacaacagacggtttgtatcacaagagacagggaac
ttgtacattgccaaagtggagccatcagatgttggcaactacacttgcttcataacaaac
aaagaggcccagaaaagtgttcaaggaccacctactccattggtacagcgcactgatggt
gtgatgggggaatatgaaccaaagattgaagtgcgttttcctgaaactatgcaagctgca
aaggattcatctgtaaaactggaatgttttgcccttggaaatcccgtccctgatattagt
tggaggaggttggatggaagcccattgccggggaaagtcaaatacagcaaatcccaagct
atccttgaaatcccgaactttcaacaggaagatgaaggcttctatgagtgtattgcaagt
aaccttcgaggaagaaaccttgcaaagggtcaactcattttctatgcccctccacaatgg
gaacaaaaaatccaaaatacatacttgtctatctacgacagcttattttgggaatgcaaa
gccagtggaaagccagacccttggtacacctggttaaagaatggtgaacgcctcaatccg
gaggaaagaattcaaatagaaaatgggacactcatcataactatgctgaatgtgtcagat
tctggtatctaccaatgtgctgcagaaaacaaatatcagataatttatgcaaatgcagaa
ttgagagtattagcctcagctcctgatttctccaaaactcctcttaaaaaatattcagtt
gttcaagttggtggggatattgtgattgaatgcaaaccgaatgctttccccagggccact
atttcttggaaaagaggaatagaaagcctgagacaaagcaaaagagtgtttctcttggag
gacggtagcctcaaaatatataatgttaccaggtcggatgccggattatatacttgcata
gctacaaatcagtttggtgttgcaaagaacactggcagcctcatcataaaagagcggact
gttattaccgttccaccttccaaaatggatgttacagttggcgagagtatagtcctaccc
tgccaggtgtcccatgacccctccattgaggttgcatttgtatggtctttcaatggagat
gtcatagactttaaaaaaggagtggctcattttgagaggattggaggagaatctgttggg
gatttgatgataaggaatattcagttaaatcattcaggaaaatatctatgcacggtaaaa
acatctcttgaaagtttatctgctgatggtgatatcgttgtgagaggtcccccagggccc
ccagaggatgtaagagtgaaacatatttccagtgctacttgtcaactaagctggagagca
ggctcagataataacagccccatccaaatatttagtgttcaggctcggacaccattttct
gtgggttggcaggctgtttctacagttccagaaattctcaatggtaagacattcaatgca
acagtggttggtttgaatccttgggttgaatatgaatttcgtgtagttgctgggaacagc
attgggattggagaaccaagcaagccatcagaattgttaagaacaaaagcatcagtccct
gcagtggcaccaacaaacatcaatggaggaggaggaagtcggtctgaactcatcattact
tgggagtcaattccagaagaactacagaatggagaggactttggatacatcgtcatgctg
cggccagtaggttcaacaacctggaccagggaaagagtgccgtctgtagagacatcaagg
tttatttacagaaatgaaaacatcatccctctctctccctttgaagtcaaagtgggtgta
tataataaggaaggagaaggacccctgagtactgtgtccattatctactctggggaagat
gaacctcaactggccccaaggggaacttctgttcaaagcttttctgcttcagaaatggag
gtttcatggaatgctattgcctggaatagaaacactggaagagttctgggctatgaggtt
ttatactggacagatgattccaaagaatccatgataggcaaaatcagggtcagtggaaat
gtcacaaccaaaaacatcacaggcctgaaagctaacaccgtctactttgcttctgtgaga
gcttataacactgctgggacagggccctcaagccctccagtcaacgttaccactaagaag
tcccctccaagccaaccaccagctaacattgcctggaagttgacaaactctaagttatgc
ctaaactgggagcatgtaaaaactatggagaatgagtctgaagtgttaggctacaagatt
ctgtaccggcaaaacagacagagtaaaactcatattttggaaacaaacaacacatctgct
gagcttctggttccctttgaagaggactacttgattgaaataagaacagttagtgatggt
ggggatggaagcagcagtgaggaaattaggattccaaaaatgtcaagtttgagttccaga
ggaatttcagtcttagaacctagcgtccatttcctgtcagttgtcgtcacaatttttgtt
gttttgctattcagccacttatatgaagaataa
DBGET
integrated database retrieval system
