Odocoileus virginianus (white-tailed deer): 110137051
Help
Entry
110137051 CDS
T10722
Symbol
MYO5C
Name
(RefSeq) unconventional myosin-Vc
KO
K10357
myosin V
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
110137051 (MYO5C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ovr03019
]
110137051 (MYO5C)
04131 Membrane trafficking [BR:
ovr04131
]
110137051 (MYO5C)
03029 Mitochondrial biogenesis [BR:
ovr03029
]
110137051 (MYO5C)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ovr04812
]
110137051 (MYO5C)
Messenger RNA biogenesis [BR:
ovr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
110137051 (MYO5C)
mRNA cycle factors
P-body specific factors
110137051 (MYO5C)
Membrane trafficking [BR:
ovr04131
]
Others
Actin-binding proteins
Myosins
110137051 (MYO5C)
Mitochondrial biogenesis [BR:
ovr03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
110137051 (MYO5C)
Cytoskeleton proteins [BR:
ovr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
110137051 (MYO5C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_13
AAA_22
AAA_16
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
110137051
NCBI-ProteinID:
XP_070325367
LinkDB
All DBs
Position
6:46525798..46639584
Genome browser
AA seq
1742 aa
AA seq
DB search
MAVAELYTKYNRVWIPDSEEVWKSAEITKDYRVGDKVLQLLLEDGTELDYSIDPECLPPL
RNPDILVGENDLTALSYLHEPAVLHNLRIRFAESKLIYTYSGIILVAMNPYKQLPIYGDA
IIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNKNQSIIVSGESGAGKTVSARYAMRYFAT
VSKSSSNAHVEDKVLASNPITEAVGNAKTTRNDNSSRFGKYTEISFDERNQIIGANMRTY
LLEKSRVVFQSENERNYHIFYQLCASAQQSEFKHLKLGSAEEFNYTRMGGSTVLEGVNDR
ADMIETQKTFTLLGFKEDFQMDVFKVLAAILHLGNVQITAVGNERSVINEDDGHLEVFCE
LLGLESGRVAQWLCNRKIVTTSETVVKPMTRPQAVNARDALAKKIYAHLFDFIVERINQA
LHFSGKQHTFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEDI
PWTLIDFYDNQPVIDLIEAKMGILELLDEECLLPHGTDENWLQKLYNNFVNRNSLFEKPR
MSNTSFIIQHFADKVEYKCEGFLEKNRDTVYDMLVEILRASKFHLCANFFQENPVPSSPF
GSAITVKSAKPVIKPNNKHFRSTVGSKFRSSLYLLMETLNATTPHYVRCIKPNDEKLPFE
FDSKRIVQQLRACGVLETIRISAQSYPSRWTYIEFYSRYGVLMTKQELSFSDKKEVCKVV
LHRLIQDSNQYQFGKTKIFFRAGQVAYLEKLRLDKLRQGCIVIQKHIRGWLQRKKFLRER
RAAVIIQQYFRGQKTVRKAVTATALKEAWAATVIQKCCRAYLVRNLYQLIRVATITIQAY
TRGFLARRRYQKMLKEHKAVILQKYARAWLARRRFQNIRRFVLNIQLTYRVQRLQKKLED
QNKENHGLVEKLTCLAALRASDVEKIQKLESELDRAATHRQNYEEKGMRYRASVEEKLAK
LQKHNSELEIQKEQIQQKLQEKTEELKEKMDNLTKQLFDDVQKEEQQRILLEKSFELKTQ
DYEKQIRSLREEIKALKDEKMQLQRQLEEERVASDGLKGEVARLSKQAKTISEFEKEIEL
LQTQKIDVEKHVQSQKREMREKMSEITRQLLESYDIEDVRNRLSLEDLEHLNEDGELWFA
YEGLKKATRVLENHFQSQKDCYEKEIEALNFKVVHLSQEINHLQKLFREENDINESIRHE
VTRLTSENMMIPDFKQQISELEKQKQDLEIRLNEQTETMKGKLEELSNQLNHNQEEEGAQ
RKTIEAQNEIHTKEKEKLMDKTEEMQEASEHLRKQFETENEVKSSFRQEASRLTMEKRDL
EEELDMKERVIKKLQDQVKTLTKTIEKANDVHLSSGPKEYLGMLQYKREDEAKLIQNLIL
DLKPRGVVVNMIPGLPAHILFMCVRYADSLNDADMLKSLMNSTISGIKQVVKEHLEDFEM
LSFWLSNTCHFLNCLKQYSGEEEFMKHNSPHQNKNCLNNFDLSEYRQILSDVAIRIYHQF
IIVMENNIQPIIVPGMLEYESLQGISGLKPTGFRKRSSSIDDTDAYTMTSVLQQLSYFYS
TMCQNGLDPEIVRQAVKQLFFLIGAVTLNSLFLRKDMCSCRKGMQIRCNISYLEEWLKDK
NLQNNLAKETLEPLSQAAWLLQVKKTTDSDAKEIYERCTSLSAVQIIKILNSYTPIDDFE
KRVTPSFVRKVQALLNSREDSSHLMLDTKYLFQVTFPFTPSPHALEMIQIPSSFKLGFLN
RL
NT seq
5229 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggccgagctatacacaaagtacaacagggtttggattcctgattctgaagaa
gtttggaagtctgctgaaataacaaaggactatagagttggtgacaaagtcttgcaactc
ctgctggaggatggaacggagctggattattctattgatcctgaatgtctgcctccactt
cggaatcctgacatccttgtgggtgagaacgacctcacagccctcagctacctccacgag
cctgcagtgctccacaatctcagaattcgttttgcagaatccaaactcatttacacctac
agcggaatcatcttggtggccatgaatccttacaagcagctgccgatatatggagatgcc
atcatccacgcctacagtgggcagaacatgggcgacatggacccacacatatttgctgtg
gcagaagaggcatacaagcagatggccagaaacaataaaaaccagtcaataattgtaagt
ggggagtctggtgctggaaagacagtgtctgctcgctatgccatgaggtactttgccacc
gtcagcaagtccagcagtaatgctcacgtggaagacaaggtcctagcatcaaaccccata
actgaggctgttggaaatgccaagaccacccgcaatgacaacagcagtcggtttgggaaa
tacacggaaattagttttgatgagagaaatcaaattataggtgcgaacatgagaacttac
ctgctggagaaatccagagttgtctttcaatcagaaaatgaacgaaattaccacattttc
tatcagctttgtgcatctgcacagcagtcggaatttaaacatcttaaattagggagtgca
gaagaatttaattatacgcgaatgggaggcagtacggtccttgagggtgtgaatgacaga
gctgacatgatagagactcagaagaccttcacactgctgggtttcaaggaagattttcag
atggacgtttttaaggtcctggcagccatcctacatctgggcaacgtacagatcacagca
gtgggcaacgagagatcagtgatcaacgaggatgatggtcacctggaggtgttctgtgag
ctcctgggcctggagagtggcagagtggctcagtggctgtgtaatcgcaagatcgtcaca
acctccgagacagtggtgaagcccatgaccaggccccaggctgtcaatgccagggatgca
ctggccaaaaagatctacgctcacctgtttgacttcattgtggagagaattaaccaagcc
ttgcacttttcaggcaagcagcacacttttattggtgttttggacatttatggttttgaa
acctttgatgtgaacagctttgaacagttttgcatcaattatgctaatgaaaagctgcaa
cagcagtttaacctgcatgtctttaaacttgaacaagaagaatatatgaaggaagacatt
ccttggactctgatagatttttatgacaaccaaccagtcattgacctgattgaagcaaaa
atgggcattttggagttactggatgaagaatgcttgttaccacatgggactgatgaaaac
tggcttcaaaagctgtataataattttgtcaacagaaactctttgtttgaaaaacccaga
atgtcaaacacctcctttatcatccagcactttgcagataaggtagagtataaatgtgaa
ggtttccttgagaagaacagagataccgtctatgacatgctggttgaaatcctgagagca
agcaagtttcatctatgtgccaacttttttcaagaaaatccggttccttcttccccattt
ggttcagcgatcacagttaaatctgcaaagccagtcatcaagccaaacaacaagcatttc
cggagcaccgtggggagcaagttccgcagctctctctacttgctcatggagactctcaac
gccaccactccccactatgtccggtgcattaagccaaatgatgagaaactgccctttgag
tttgactccaaaagaattgttcagcagctgcgagcctgtggagtcttagaaacgattcgc
attagtgcccagagctacccttctaggtggacatacattgagttctacagccgctacggg
gtcctcatgaccaagcaggagctttcattcagcgataaaaaggaggtgtgcaaagtggtc
ttacaccggctcatccaggattctaatcagtaccagtttggcaaaaccaaaattttcttc
agagcagggcaagtggcttatttagaaaaactccggttggataaactgaggcagggttgt
attgtgatacaaaagcacatccgtggctggctccagagaaaaaaattcctccgagagaga
cgagcagccgtgatcatccagcagtacttccggggtcagaaaactgtgaggaaagcggtt
actgccacagccttaaaagaagcatgggcagccactgtcattcagaagtgctgtcgagcg
tatctcgtccgcaacctgtaccagctgattcgcgtggccaccatcaccatccaggcctac
acccgagggttcctggcaaggaggaggtatcaaaagatgctgaaggaacacaaggctgtg
atccttcagaaatatgcccgggcctggctggccagacgcagattccagaatatccgacga
ttcgtgctcaacattcagctcacttacagagttcagcgtttgcagaaaaagctagaagac
cagaacaaagagaaccacgggctggtggagaagctgacctgcttggctgcccttcgggcc
agtgacgtggagaagattcagaaactggaatccgaactggacagagcagccacccacagg
cagaattatgaggagaaggggatgagatacagggcttccgtggaagagaaattggcaaag
cttcagaagcataattcagaattggagatacaaaaagagcaaatacagcagaagcttcaa
gagaagactgaagagttgaaagaaaaaatggataacctcaccaagcagctctttgatgat
gtgcaaaaagaagaacaacaaagaatacttcttgaaaaaagtttcgaactgaaaacgcaa
gactatgagaagcagatccggtctttgagagaggaaattaaagctctcaaggatgagaag
atgcaactgcagcgtcagctggaggaagagcgggtcgcctctgatggcctgaaaggggaa
gtggcccggctgagcaagcaggcaaagacgatctctgagtttgaaaaggagatagagtta
cttcagacacagaagatagatgtggaaaaacatgtgcagtcccagaaaagggaaatgaga
gaaaagatgtcagagattaccagacaacttcttgaaagctatgacattgaagatgtaaga
aacaggctgtctctagaagatttggaacatttaaatgaggatggagaactttggtttgct
tacgaaggactgaagaaagcaacacgcgttttggagaaccatttccagtcccagaaggac
tgctatgaaaaggagattgaagctctgaacttcaaagtggtgcatctaagtcaggaaatc
aaccacctgcagaaattatttagagaagagaatgacatcaatgaaagtatccgtcatgaa
gttaccaggctaacgtcagaaaacatgatgatcccagactttaaacaacaaatttcagaa
ctggaaaaacagaagcaagatcttgaaatccgcctgaatgaacaaactgaaaccatgaaa
ggaaaactagaagaattgtcaaatcagttgaatcacaatcaagaagaagaaggagcacaa
agaaagaccatagaagcccagaatgaaatacataccaaagagaaagagaagctgatggat
aagactgaagaaatgcaggaggccagcgagcacttgaggaaacaatttgaaactgaaaat
gaagtcaagagtagtttccggcaggaagcatctcgtctcactatggagaagagggatctt
gaagaagagttagacatgaaggaaagagtgattaaaaagttacaagatcaagtgaagact
ctaaccaagacaattgaaaaagccaatgacgtgcacctgtcctcaggacccaaggagtac
cttggaatgctgcaatacaagagagaagatgaggccaagctcattcaaaacctcattctt
gatctgaagccccgtggtgtggtggtgaacatgatccccgggctgccagctcacatccta
ttcatgtgtgtacgctacgcagactctctaaatgacgccgacatgctcaagtccctcatg
aacagcaccattagtggcatcaagcaggtggttaaggaacatttagaagactttgagatg
ctgtctttttggctttccaatacctgtcatttcctcaattgcctgaagcagtacagtgga
gaagaggaattcatgaagcataatagtccacatcagaataagaattgcttgaacaatttt
gacctttcagaatacagacagattcttagtgatgtggctatacgaatatatcatcagttc
attatcgtgatggaaaataacattcaaccaataatagtgccaggcatgctggagtacgag
agtctgcagggcatttctggcctgaagcccacaggcttccggaagcggtcctccagcata
gatgacacggatgcctacacgatgacctccgtcctgcagcaactgagctacttctacagc
accatgtgccagaatggcctggaccctgagatcgtgaggcaggcggtgaagcagctcttc
ttcttgatcggggcggtcaccctaaacagtctcttcctgcgcaaggacatgtgctcctgt
agaaaagggatgcagataaggtgcaacatcagttacttagaagaatggcttaaagataag
aatttacagaacaacttggccaaggaaactttggagcctctctcacaggcagcatggttg
cttcaggtgaagaagaccaccgacagtgatgccaaggagatctacgaacgctgtacgtcc
ctgtctgccgtgcagatcataaagattcttaattcatacacacctatagatgactttgaa
aaaagagtgactccatccttcgttcgcaaagtgcaggctctcctaaacagccgagaggat
tcatcacacctgatgttggacaccaaatacctctttcaagtcacatttcctttcactccc
tctccacatgctctggaaatgatccaaatccccagcagttttaagcttggctttctcaat
aggttatag
DBGET
integrated database retrieval system
