Odocoileus virginianus (white-tailed deer): 110137150
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Entry
110137150 CDS
T10722
Symbol
CDH1
Name
(RefSeq) cadherin-1
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr04015
Rap1 signaling pathway
ovr04371
Apelin signaling pathway
ovr04390
Hippo signaling pathway
ovr04514
Cell adhesion molecules
ovr04520
Adherens junction
ovr05100
Bacterial invasion of epithelial cells
ovr05200
Pathways in cancer
ovr05213
Endometrial cancer
ovr05216
Thyroid cancer
ovr05218
Melanoma
ovr05219
Bladder cancer
ovr05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
110137150 (CDH1)
04390 Hippo signaling pathway
110137150 (CDH1)
04371 Apelin signaling pathway
110137150 (CDH1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
110137150 (CDH1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
110137150 (CDH1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
110137150 (CDH1)
09162 Cancer: specific types
05226 Gastric cancer
110137150 (CDH1)
05216 Thyroid cancer
110137150 (CDH1)
05218 Melanoma
110137150 (CDH1)
05219 Bladder cancer
110137150 (CDH1)
05213 Endometrial cancer
110137150 (CDH1)
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
110137150 (CDH1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ovr03036
]
110137150 (CDH1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ovr04515
]
110137150 (CDH1)
04090 CD molecules [BR:
ovr04090
]
110137150 (CDH1)
Chromosome and associated proteins [BR:
ovr03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
110137150 (CDH1)
Cell adhesion molecules [BR:
ovr04515
]
Cadherins
Major cadherins
110137150 (CDH1)
CD molecules [BR:
ovr04090
]
Proteins
110137150 (CDH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_pro
CADH_Y-type_LIR
TM_ErbB1
DUF6812
Motif
Other DBs
NCBI-GeneID:
110137150
NCBI-ProteinID:
XP_020749043
UniProt:
A0A6J0XGT0
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All DBs
Position
20:complement(24888058..24958575)
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AA seq
883 aa
AA seq
DB search
MGPRCRNLSALLLLLQVSSWLCQEPEPCIPGFGAASYTFTVPRRNLERGRFLGRVSFEGC
AGLPRTVYVSDDTRFKVHTDGVVTVKRPVHLHRPELSFLIHAWDSTHRKLSTKVTLKVSA
HHHHHHHHHDSPSGTQMEVLTFPSPHHGLRRRKRDWVIPPISCPENEKGPFPKALVQIKS
NRDKETQVFYSITGQGADTPPVGVFIIERETGWLKVTQPLDREHIAKYILFSHAVSSNGQ
AIEEPMEIVITVTDQNDNKPQFTQEVFKGSVLEGALPGTSVMQVTATDADDDVNTHNAAI
AYKILTQEPTLPHDQMFTINRETGVISVLTTGLDRESFPTYTLAVQAADLNGEGLSTTAT
AVITVLDTNDNAPRFDPTTYVGSVPENEANVAITTLTVTDADVPSTPAWEAVYTVLNDNE
KQFIVVTDPVTNEGTLKTAKGLDFEAKQQYILYVAVTNVAPFEVTLPTSTATVTVDVIDV
NEAPIFVPPQKRVEVPEDFGVGLEITSYTAREPDTFMEQKITYRIWRDAANWLEINPDTG
AISTRAELDRENVEHVKNSTYTALIIATDNGSPPATGTGTLLLFLDDVNDNGPVPEPRVM
DFCQRNPEPHIINIIDPDLPPNTSPFTAELTHGASVNWTIEYNDQERESLILKPKKTLEV
GDHKINLKLIDNQNKDQVTTLDVHVCDCDGIVSNCRKATGYTEAGMQVPAILGILGGILA
FLILILLLLLLVRRRRVVKEPLLPPEDDTRDNVYYYDEEGGGEEDQDFDLSQLHRGLDAR
PEVTRNDVAPTLMSVPQYRPRPANPDEIGNFIDENLKAADTDPTAPPYDSLLVFDYEGSG
SEAATLSSLNSSESDQDQDYDYLNEWGNRFKKLADMYGGGEDD
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgggccctcggtgccgcaacctctctgcgctcctgctgctgctgcaggtctcatcgtgg
ctctgccaggagccggagccctgcattcctggctttggcgctgcgagttacacgttcaca
gtgccccggcggaacttggagagagggcgattcctgggcagagtgagttttgaaggatgt
gctggcctaccaaggacagtctatgtttctgacgacacccgattcaaagtgcacacagat
ggcgtggttacagtcaagcggcctgtgcaccttcatcgtccagagctaagttttcttatc
catgcctgggactccacccacaggaagctctccaccaaagtgacactgaaggtgtcagcg
caccaccatcaccaccaccatcatcatgactctccttctggaacccagatggaagtactc
acatttcccagcccccaccatggtctcaggagacggaagagagactgggttattcctcct
atcagctgcccagaaaatgagaaaggcccatttcctaaggcactggtccagatcaaatct
aacagggataaagaaacccaagttttctacagcatcactggccaaggagctgacacaccc
cctgtcggtgtttttattattgagagagaaacaggatggttaaaagtgacacagcctctg
gatagagaacacattgccaagtacatcctcttctctcatgctgtgtcttcaaacggacaa
gctattgaggagcctatggagattgtgatcaccgtgaccgaccagaatgacaacaagccc
cagttcacccaggaggtcttcaaggggtctgtcctggaaggcgctcttccaggaacctct
gtgatgcaggtcacagccacagatgcagatgacgatgtgaacacccacaatgctgccatt
gcttacaaaatcctcacccaagagcccacgctgccgcacgaccaaatgtttaccatcaac
agggaaacgggcgtcatcagtgtgctcaccaccgggctggaccgggagagttttcccaca
tacaccctggcggtccaagcagcagaccttaacggcgaaggcttgagcacaactgcaacg
gccgtgatcacggtcctggacaccaacgataatgctcccagatttgacccgaccacgtac
gtggggtcggtgcctgagaacgaggctaacgtggccatcaccacactcacagtgaccgat
gccgacgtccccagcaccccagcatgggaggctgtttacacagtattaaatgataatgag
aagcaattcatcgttgtcacggacccagtcaccaatgaaggcactctgaaaacagctaag
ggcttggattttgaggccaagcagcagtacatcctgtatgtggcagtgacaaatgtggcc
ccctttgaagtcactctccccacttccacggccaccgtcaccgtggacgtgatagatgtg
aatgaagcccccatctttgtacctcctcaaaagagagtggaagtgcccgaggactttggc
gtgggcctggagatcacatcctataccgcccgggagccagacacatttatggaacagaag
atcacgtatcggatttggagggacgctgccaactggctggagattaatccggacacaggt
gctatttccactcgggctgagttggacagagagaatgtcgagcatgtgaagaacagcacg
tacacggccctcattatagccactgacaatggttctccgcctgccactgggacaggcacc
ctgctcctgttcctcgatgatgtgaatgacaatggccctgtaccagaaccccgggtcatg
gacttctgccagaggaatcccgagcctcacatcatcaacatcattgatcccgatctcccc
ccgaacacctcccccttcacagcagaactgacacacggggcgagtgtcaactggaccatt
gagtacaatgaccaagaacgtgaatctctgattttgaagccaaagaaaaccttagaggtg
ggtgaccacaaaatcaatctcaagctcatagacaaccagaacaaagaccaggtgaccaca
cttgacgtgcacgtgtgtgactgtgatgggatcgtcagcaactgcaggaaggccacaggt
tataccgaagcaggaatgcaagttcccgccatcctgggaatcctcggaggcatccttgct
tttctgatccttatcctgctgcttctgctgcttgttcggaggagaagggtggtcaaagaa
cccttactgcccccagaagatgacacccgggacaatgtgtattactatgatgaagaagga
ggtggagaagaagaccaggactttgacttgagccaattacataggggcctggatgctcgg
cctgaagtgactcgcaatgacgtggcaccaaccctcatgagtgtgccccagtaccgaccc
cgccctgccaatcctgatgaaattggaaactttattgatgaaaacctgaaggcagctgat
actgaccccactgccccaccctatgactctctgctggtgtttgattatgaaggaagtggt
tctgaagctgctactctgagctccctgaactcctcagagtcagaccaagaccaggactat
gactacctgaatgaatggggcaatcgcttcaagaagctggcggacatgtatggaggtggc
gaggatgactaa
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