Odocoileus virginianus (white-tailed deer): 110137412
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Entry
110137412 CDS
T10722
Symbol
SETD1A
Name
(RefSeq) histone-lysine N-methyltransferase SETD1A isoform X1
KO
K11422
[histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:
2.1.1.354
]
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr00310
Lysine degradation
ovr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
110137412 (SETD1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ovr03036
]
110137412 (SETD1A)
Enzymes [BR:
ovr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
110137412 (SETD1A)
Chromosome and associated proteins [BR:
ovr03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
110137412 (SETD1A)
HMT complexes
COMPASS/SET1 complex
110137412 (SETD1A)
COMPASS/SET1 complex (yeast)
110137412 (SETD1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
N-SET
RRM_1
Motif
Other DBs
NCBI-GeneID:
110137412
NCBI-ProteinID:
XP_070317308
UniProt:
A0ABM4HP11
LinkDB
All DBs
Position
33:25969687..25993842
Genome browser
AA seq
1742 aa
AA seq
DB search
MDQEGGGDGQKAPSFQWRNYKLIVDPALDPALRRPSQKVYRYDGIHFSVNDSKYIPVEDL
QDPRCHVRSKNRDFSLPVPKFKLDEFYIGQIPLKEVTFARLNDNVRETFLKDMCRKYGEV
EEVEILLHPRTRKHLGLARVLFTSTRGAKETVKNLHLTSVMGNIIHAQLDIKGQQRMKYY
ELIVNGSYTPQTVPTGGKALSEKFQGSGAATETTDSRRRSSSDTAAFPAGSAVVGTPGNG
TPCSQDTSFSSSRQDTPSSFGQFTPQSSQGTPYTSRGSTPYSQDSAYSSSTTSTSFKPRR
SENSYQDSFSRRHFSASSAPTTTSAAISATTAATAAAASSSSSSLSSSSSSSSSSSSSHF
RGSDSNYPAYYESWNRYQRHASYPPRRATRDEPPGASFAENTAERFTPSYTSYLPPEPNR
PADQDYRPPASEAPPPEPPEPGGGGGGGGPSPEREEARTSPRPASPARSGSPAPETTNES
VPFAQHSSLDSRIEMLLKEQRSKFSFLASDTEEEEENSSTGPGARDTGSEAPSGPGHGPC
TPPPAPASFEDVAPTGSGEPGATRESPKANGQSQASPCSSGEDMEISDDDRGGSPPPAPT
PPQQPPPPPPPPPPPPPYLASLPLGYPPHQPAYLLPPRPDGPPPPEYPPPPPPPPHIYDF
VNSLELMDRLGAQWGGMPMSFQMQTQMLTRLHQLRQGKGLTAASAGPPGGAFGEAFLPFP
PHQEAAYGLPYALYAQGQEGRGAYSREAYHLPLPMAAEPLPSSVSGEEARLPPREEAELA
EGKALPSAGTVGRVLATLVQEMKSIMQRDLNRKMVENVAFGAFDQWWESKEEKAKPFQNA
AKQQAKEEDKEKTKLKEPGLLSLVDWAKSGGTTGIEAFAFGSGLRGALRLPSFKVKRKEP
SEISEASEEKRPRPSTPAEEDEDDAEREKEVGEPGRPGTKPPKRDEERNKSQGKHRKSFA
LDSEGEEASQESSSEKDEEDEEEDEEDEEREEAMDAAKKETEASDGEDEESDSSSKCSLY
ADSDGENDSTSDSESSSSSSSSSSSSSSSSSSSSSSSSESSSEEEEEEEQPATIPAASSP
PRDVPTPLSAPAEEPEPERVEDSPVTPLPEQEKSPARPADPVRGGIEALINPKTPFSLLK
SLGGRRADGVAGSTEEPPPSAPQPPLEPPAGPPAPTPRPDERPSSPIPLLPPPKKRRKTV
SFSAVEEAPAPEPPPAAPPQVKSPGPASRKAPRAVERTIRNLPLDHASLVKSWPEEVSRG
GRNRVGGRGRPAEEEEAEPATEVDLAVLADLALTPARRSLPALPTTDDSEATETLDEAEH
PGPLLSHILLEHNYALAVRPPPPPPPPPSTLAPRPLEPVPAPAALFSSPADEVLEAPEVV
VAEVEEPKQPPQQQEDGEEEEEEEEESESSESSSSSSSDGEGATRRRSLRSHTRRRRPPP
PPPPPPPPTFDPRSEFEQMTILYDIWNSGLDLEDMSYLRLTYERLLQQTSGADWLNDTHW
VQHTITNLSTPKRKRRPQDGPREHQTGSARSEGYYPISKKEKDRYLDVCPVSARQLEGAD
TQGTNRVLSERRSEQRRLLSAIGTSAIMDSDLLKLNQLKFRKKKLRFGRSRIHEWGLFAM
EPIAADEMVIEYVGQNIRQMVADMREKRYVQEGIGSSYLFRVDHDTIIDATKCGNLARFI
NHCCTPNCYAKVITIESQKKIVIYSKQPIGVDEEITYDYKFPLEDNKIPCLCGTESCRGS
LN
NT seq
5229 nt
NT seq
+upstream
nt +downstream
nt
atggatcaggaaggtgggggagatgggcagaaggccccgagcttccagtggcggaactac
aagctcatcgtggatcctgccttggaccctgccctacgcaggccttctcaaaaggtgtac
agatacgatggaatccactttagtgtcaacgactcaaagtatataccagtggaggacctc
caagacccccgttgccacgtcaggtccaaaaacagagacttttccctcccagtccctaag
tttaagctggatgagttctatatcggacagatcccactgaaagaggtgacatttgcaagg
ctgaatgacaacgtgcgggagaccttcctgaaggacatgtgccgaaagtatggtgaggtg
gaagaggtggagattcttctccacccccgtactcgcaagcacctgggcctggcccgcgtg
ctcttcaccagcactcggggagccaaggaaacagtcaaaaacctccaccttacctccgtt
atgggcaacatcatccatgcccagctcgacatcaaaggtcaacaacgaatgaaatactat
gaactgatagtcaacggctcctacacccctcagacagtgcccactgggggcaaggccctg
agtgagaagttccaaggctctggtgcagccacggagacgactgactcccgccgccgctcc
tcgtccgacacagctgccttcccggcgggctcggctgtggtgggcactcccggcaatggc
accccctgctcccaggacacaagcttctccagcagccgacaggacaccccgtcttccttc
ggccagttcacccctcagtcctcgcaaggaaccccctacacgtctcggggcagcaccccc
tactctcaggactctgcctactccagcagcaccacttcaacctccttcaagccccggagg
tcagagaacagctaccaagattccttctcccgccgccatttttccgcctcttcggccccc
acgaccacctctgccgccatctccgccaccactgcagccaccgctgccgccgcctcctct
tcttcctcctcgttgtcttcgtcctcttcgtcgtcctcttcttcctcatcctctcacttt
cgcggttcggactcaaactacccagcgtattacgaaagctggaatcgctaccaacgccat
gcttcctacccaccccgccgggcaactcgggatgagccccccggggcctcttttgctgaa
aataccgctgagcgcttcacgccatcttacacctcctacttgccccccgagcccaaccgg
cctgctgaccaggactaccggcctcctgcctccgaagctccgcccccagagcctccagaa
cctggtggagggggaggcggcggggggcccagccccgagagagaagaagctcgaacctcc
ccgcgcccagcctcacctgcccgttccggctccccagccccagagaccaccaacgagagc
gtgccctttgctcagcacagcagcctggattcccgcattgagatgttgttgaaggagcag
cgttccaagttttccttcttggcctctgacaccgaggaagaagaagagaacagcagcacg
ggcccgggggctcgggacacagggagcgaggccccctctgggccaggtcacgggccctgc
acaccccctccggccccggcaagttttgaggatgtggcacctacagggagtggggaacca
ggagctacccgggagtcgcccaaggccaacggacagagccaggcttctccatgctcttct
ggagaggacatggaaatctccgacgacgacaggggcggctcaccccctccggccccaaca
cccccccagcaacctccgccccctccgccgccacctcccccaccccctccttacctggct
tcccttcctcttggttatcctccccaccagcctgcctacctcctccccccgagacccgat
gggccgccacctcctgagtacccccctcctcctccaccacccccccacatctatgacttt
gtgaactctttagagctcatggatcgactcggggctcagtggggaggaatgcccatgtcc
ttccagatgcagacccagatgttaactcggctccaccagctgcggcagggcaaaggattg
accgcagcttcagcgggtccccccggtggggcctttggggaggccttcctcccattccca
ccccaccaagaggcagcctacggcctaccatatgctctgtacgcccaagggcaagaaggc
cgaggggcatactctagggaggcctaccacctgcctttgcccatggcagccgagcccctg
ccctcctcagtctcaggagaagaggcacggctgcccccccgggaggaagcagagctggcc
gagggcaaggccctaccatcggcaggcaccgtgggccgtgtactagccaccctggtccag
gagatgaagagcatcatgcagcgagacctcaaccgcaagatggtggagaatgtggccttt
ggagcctttgaccagtggtgggagagcaaggaagagaaggccaagccattccagaatgca
gctaaacagcaagccaaggaggaggataaagagaagacaaagctcaaagagccaggcctg
ctgtccctcgtagactgggccaagagtggcggtaccaccggcattgaagccttcgccttt
ggatcaggactgcgaggggccctgcggctgccttctttcaaagtaaagcgaaaagagcct
tcagaaatttcagaggccagtgaggaaaagaggccccggccttctactccagctgaggaa
gatgaagatgatgctgagcgagagaaggaggttggagagccaggccgtccggggaccaag
cccccaaaacgagatgaagagcgaaacaagagccagggcaagcaccgcaagtcctttgct
ctggacagtgagggggaggaggcatcccaggagtcctcctcagagaaggatgaggaggat
gaagaggaagatgaagaagatgaagagcgtgaggaagccatggatgctgcaaagaaggag
acagaagcatcagacggcgaggacgaggaaagcgattcgtcctccaaatgttctctgtat
gctgactcagatggtgagaatgatagcacgtcggactctgagagcagcagttcctccagc
tcctcgtcttcttcatcctcttcgtcttcatcctcgtcctcctcctcctcatctgagtcc
tcctcggaagaagaagaggaagaggagcagccagcaaccatacccgcagcatcgtcaccc
cccagagatgtccccacgcccctgtcagcacctgcagaggagcccgagccagagagggtt
gaagactccccagtcacacctctccccgaacaggagaagtctcctgcgagacctgcagat
cccgtgagaggaggaatcgaggcactgattaaccctaagacacctttcagcctcttgaag
tccttgggtggcagaagagctgatggagtcgcaggttccaccgaggagccgcctcccagt
gcgccccagcctcccctagagccaccagctggacccccggcccccaccccccgccctgac
gagcgcccctcctctcccatccctctcctgcccccacccaagaaacgccggaaaactgtc
tccttctctgcggtggaggaggcaccggccccagagcctccccccgccgccccaccacag
gttaagtctcccggccctgcctcccgcaaagccccccgggctgtggagcggaccattcgt
aacctgccgctcgaccacgcctctctggtcaagagttggccggaggaggtgtcccgagga
ggccggaaccgggtcggaggccgaggccgccccgccgaggaagaggaggctgaaccggcc
acagaagtggacctggccgtgctggctgacctggccctgaccccagcacggcgcagcctg
cccgccctgcccaccaccgacgactcggaggccacggagacactggacgaggcggagcac
ccgggccccctgctcagccacatcctcctggagcacaactacgccctggccgttaggccg
ccgccgccgcccccgccgccaccctccacgcttgcccctcggcccctggaacctgttccg
gcccccgcggccctcttcagctccccggcagatgaggtcctcgaggccccggaggtggtg
gtggccgaggtggaggagccaaagcagccgccacagcagcaggaggacggggaggaggag
gaggaagaggaagaggagtcggagtcatcggagagcagcagcagcagcagcagcgacggc
gagggcgccacccggcggcgcagcctccgctctcacacccggcgccggcggccgcccccg
ccgccgccgccacccccgccccccaccttcgatccccgcagcgagtttgagcagatgacc
atcctctatgacatttggaattcaggcctggacttggaggacatgagctacctgcggctg
acgtacgaacggcttctgcagcagactagcggggccgactggctgaacgacacccactgg
gtccagcacaccatcaccaacctgagcactccaaaacgcaagcggcggccccaagatggg
ccccgggagcaccagacaggctcagcccgcagcgaaggctactaccctatcagcaagaag
gagaaggaccggtatctggacgtgtgccccgtctcggcccggcagctagaaggagcggat
actcaggggactaaccgtgtgctttcggagcgccggtcagagcagcggcggctgctgagt
gccatcggcacctctgccatcatggacagtgatctgctgaagttaaaccagctcaagttc
cggaagaagaagcttcgatttggccggagccggatccacgagtggggactgtttgccatg
gaacccatcgctgctgatgagatggtcatcgaatacgtgggtcagaacattcgccagatg
gtggctgacatgcgggagaagcgctatgtgcaggagggcattggcagcagctacctgttc
cgcgtagatcacgacaccatcatcgacgccaccaagtgtggcaacctggcgaggttcatc
aaccactgctgcacgcccaactgctatgccaaggtgatcaccatcgagtcccagaagaag
attgtgatctactcaaagcagccgatcggcgtggatgaggagatcacctacgactacaag
ttcccgctggaggacaacaagatcccatgtctgtgcggcacggagagctgccgcggctcc
ctcaactga
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integrated database retrieval system
