Odocoileus virginianus (white-tailed deer): 110137429
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Entry
110137429 CDS
T10722
Symbol
KDM1B
Name
(RefSeq) lysine-specific histone demethylase 2
KO
K19413
lysine-specific histone demethylase 1B [EC:1.-.-.-]
Organism
ovr Odocoileus virginianus (white-tailed deer)
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ovr03036
]
110137429 (KDM1B)
Chromosome and associated proteins [BR:
ovr03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
110137429 (KDM1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
zf-CW
Pyr_redox_2
Pyr_redox
DAO
Thi4
HI0933_like
FAD_binding_3
Pyr_redox_3
SWIRM
Lycopene_cycl
FAD_binding_2
FAD_oxidored
NAD_binding_9
GIDA
AlaDh_PNT_C
2-Hacid_dh_C
NAD_binding_7
zf-RING_2
KARI_N
Attractin
Shikimate_DH
YjeF_N
TrkA_N
Motif
Other DBs
NCBI-GeneID:
110137429
NCBI-ProteinID:
XP_070312291
UniProt:
A0ABM4H9Q2
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All DBs
Position
27:10718119..10759950
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AA seq
820 aa
AA seq
DB search
MATSRGRTKKKASFDHSPDSLPLRSSGRQAKKKAPETTDEDEDGGSEKKYRKCEKAGCTA
TCPVCFASTSERCAKNGYTSRWYHLSCGEHFCNECFDHYYRSHKDGYDKYTTWKKIWTSN
GKTEPSPKAFMADQQLPYWVQCTKPECRKWRQLTKEIQLTPQIAKTYRCGMKPNTAVKPE
TSDHCSLPEDLRVSEVSNHWWYSMLILPPLLKDSVAAPLLSAYYPDCVGMSPSCTSTHRV
ASDASPGKLEHPKAVPSVLVPGMNRYFQPFYQPNECGKALCVRPDVMELDELYEFPEYSR
DPTMYLALRNLVLALWFTNCKEALTPQKCIPHIIVRGLVRIRCVQEVERILYFMTRKGLI
NTGVLSVGPDQHLLPKDYHNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGRVW
DDKSFTGVTVGRGAQIVNGCVNNPVALMCEQLGISMHKFGERCDLIQEGGRITDPTIDKR
MDFHFNALLDVVSEWRKDKTQLQDVPLGEKIEEIYKAFIKESGIQFSELEEQVLQFHLSN
LEYACGSNLHQVSARSWDHNEFFAQFAGDHTLLTPGYSVILEKLAEGLDIRLRSPVQSID
YSGDEVQVTTTDGIACPAQKVLVTVPLALLQKGAIQFNPPLSDKKMKAINSLGAGIIEKI
ALQFPYRFWDSKVQGADFFGHVPPSASKRGLFAVFYDMDPQKQHSVLMSVIAGEAVAAVR
NLEDKQVLQQCMATLRELFKEQEVPDPNKYFVTRWSTDPWIQMAYSFVKTGGSGEAYDIL
AEEIQGTVFFAGEATNRHFPQTVTGAYLSGVREASKIAAF
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctcacgggggagaacgaagaaaaaagcatcttttgatcattctccagatagc
cttcctttgaggagttccggtaggcaggcgaagaaaaaggccccggagacgacggatgag
gatgaagacggtgggtcagagaaaaagtacaggaaatgtgaaaaagcaggctgtacggcc
acgtgtcctgtgtgctttgcaagtacttctgaaagatgtgccaaaaatggctacacatcc
cgatggtatcacctctcctgtggggagcatttctgtaatgaatgctttgaccattactac
agaagccataaggatggatatgacaaatatactacatggaaaaaaatatggacaagcaat
ggaaaaactgaacctagtcccaaagctttcatggcagaccagcagctcccctactgggtt
caatgtaccaaacctgagtgtaggaaatggaggcagcttaccaaggagatccagctgact
ccccagatagcaaagacctaccgttgtggtatgaaaccaaatactgctgttaagcctgag
acctcagaccattgttccctcccagaggatctaagagtgtcggaagtgtccaaccactgg
tggtactccatgctcatcttacctcctttgctgaaagacagcgtggctgctcccctgctc
tcggcctactacccagactgcgtgggcatgagtccatcctgcaccagcacgcaccgcgtg
gccagcgacgccagccccgggaagctggagcaccccaaggcggtcccttctgtgctggtt
ccaggcatgaaccggtacttccagcctttctaccagcccaacgagtgcggcaaagccttg
tgcgtgcggccagacgtgatggagctggatgagctctacgagttcccggagtactctcgg
gaccccaccatgtatctggctctgcggaaccttgtcctcgccctgtggttcactaactgc
aaggaagctcttactcctcagaaatgtattcctcacatcatcgtccggggtctcgtgcgc
attcgatgcgttcaggaggtggagaggatactttattttatgacgaggaaaggtctcatc
aacacaggagttctcagcgtcggccccgaccagcatcttctgcctaaagattaccacaat
aaatcagtcatcattattggggctggtccagccggattagcagctgctaggcaactgcat
aactttggaattaaggtgactgtcctggaggccaaagacagaatcggaggccgagtatgg
gatgataagtctttcacaggcgtcacggtgggacgaggagcccagattgtcaatggctgt
gttaacaacccagtagcactcatgtgtgaacaacttggcatcagcatgcataagtttgga
gaaagatgtgacttaattcaggaaggtggaagaataactgaccccactattgacaagcgc
atggattttcattttaatgctctcttggatgtggtctctgagtggaggaaggataagact
cagctccaagatgtccctttaggagaaaagatagaggagatctacaaagcttttatcaaa
gagtctggaatccagttcagtgagctggaggagcaggtgcttcagttccatctcagtaac
ctggaatatgcctgtggcagcaaccttcatcaggtgtctgctcgctcctgggaccacaat
gaattctttgcccagtttgcgggtgaccacaccctcctcactcccggatactccgtcatc
ttagaaaaactggctgagggactggacatccggctcaggtctcccgtacagagtattgac
tattctggagatgaagtgcaagttaccactacggacggaatagcgtgtccagctcagaag
gtgttagtcactgtgccgctggctttactgcagaaaggtgccattcagtttaatccaccg
ttgtcagacaagaagatgaaggccatcaacagcttaggagcaggcatcattgaaaagatt
gccttgcaatttccttataggttttgggacagtaaagttcaaggggctgacttttttggt
cacgttcctcctagtgccagcaagcgagggctttttgccgtgttctatgacatggatccc
cagaagcagcacagcgtgttgatgtcggtgatcgcgggggaggcagtggcggccgtccgg
aacctggaggacaagcaggtgctgcagcagtgcatggccaccctgcgcgagctcttcaag
gagcaggaggtcccagatcccaacaagtactttgtcacccgctggagcacggacccctgg
atccagatggcatacagcttcgtgaagacagggggcagcggtgaggcctacgacatcctt
gctgaggaaatacaaggaaccgtcttttttgctggcgaggcaacaaacaggcattttcca
caaactgttacaggggcgtatttgagtggtgttcgagaagcaagcaagatcgcagcattt
taa
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