Odocoileus virginianus (white-tailed deer): 110137579
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Entry
110137579 CDS
T10722
Symbol
CPNE1
Name
(RefSeq) copine-1 isoform X1
KO
K24526
RNA-binding protein 12
Organism
ovr Odocoileus virginianus (white-tailed deer)
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ovr03041
]
110137579 (CPNE1)
Spliceosome [BR:
ovr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
110137579 (CPNE1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
110137579
NCBI-ProteinID:
XP_020749689
UniProt:
A0A6J0XIY7
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Position
9:complement(60349743..60388037)
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AA seq
941 aa
AA seq
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MAVVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIVGGELGEAFIVFATDEDARLGMMRT
GGTIKGSKVTLLLSSKTEMQNMIELSRRRFETANLDIPPANASRSGPPPSSGMSGRVNLP
TTVPNFNNPSPSVVTATTSVHESSKNIQTFSTASIGTAPPNMGASFGSPTFSSTVPSTAS
PMNTVPPPPIPPIPAMPSLPPMPSIPPIPVPPPVPTMPPVPPVPPIPPVPSVPPMTPLPP
MSGMPPLNPPPVAPLPAGMNGSGAPVNLNNNLNPVFLGPLNPVNPVQMNSQSSVKPLPIN
PDDLYVSVHGMPFSAMENDVRDFFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEAL
KRNRMLMIQRYVEVSPATERQWVAAGGHITFKQSIGPSGQTHPPPQPLPRSKSPSGQKRS
RSRSPHEAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRN
EADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYDQREMMLNPEGDVT
SAKVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARK
SERLHRKKLNGREAFVHVVTLEDMREIEKNPPAQGKKGLKMSVPGNPAVPGIPNVGIPNA
GLPSSGMPSAGLPNAGMPNAGMPAAGMPNAGIPSAGMPAAGMPGVGMPGAGMPSAGGEEH
AFLAVGSKEANSGPPFNFPGNFGGSNAFGPPLPPPGLGGAFGDARPGMPSVGNSGLPGLG
LDVPGFGGGPNNLSGPGFGGGPQNFGNGPGSLGGPPGFGSGPPGLGNAPGHLSGPPAFGP
GPGPGPIHIGGPPGFGSSSGKPGPTIIKVQNMPFTVSIDEILDFFYGYQVIPGSVCLKYN
EKGMPTGEAMVAFESRDEATAAVIDLNDRPIGSRKVKLVLG
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggtcatccgtttgcaaggtctcccaattgtggcggggaccatggacattcgc
cacttcttctctggattgaccattcctgatgggggcgtgcatattgtagggggtgaactg
ggtgaggctttcatcgtttttgccactgatgaagatgcaaggcttggtatgatgcgcaca
ggtggtacaattaaagggtcaaaagtaacactgttgttgagtagtaaaacggaaatgcag
aatatgattgaactgagtcgtaggcgttttgaaactgccaacctagatataccaccggca
aatgctagtagatcaggaccgccacctagctcaggaatgagtggcagggtgaacttgcct
acaacagtacccaactttaataatccttcacccagtgtagttactgccaccacttctgtt
catgaaagcagcaaaaacatacagacattttccacagccagcataggaacggctcctcca
aatatgggggcttcctttgggagcccaacgtttagctcaactgttccgagcacagcttct
ccaatgaacacagtcccacctccaccaattcctccaatcccagcgatgccatctttgccg
ccaatgccgtctattcccccaataccagttcctcctccggtacctacaatgcctcctgtg
cctcctgtgcccccaatccccccagtcccttctgtgccacccatgaccccactgccaccc
atgtcaggcatgccacctttgaacccgccacctgtggcacctctacctgctggaatgaat
ggctctggagcacctgtgaatctgaacaataacctgaaccctgtgtttctgggtccattg
aatcctgttaatcctgtccagatgaactcgcaaagcagtgtgaaaccacttcccatcaac
cctgatgatctgtatgtcagtgtgcatggaatgcccttttctgcaatggaaaatgatgtc
cgagattttttccatgggctccgtgttgatgcggtgcatttgttgaaagatcatgtaggt
cgaaataatgggaatggattggttaagtttctctcccctcaagatacatttgaagctttg
aaacgaaacagaatgctgatgattcaacgctatgtggaagttagtcctgccacagagaga
cagtgggtagctgctggaggccatatcacttttaagcaaagtataggaccttctggacaa
acccatccccctcctcagccacttcccaggtcaaaatcgcccagtgggcagaaaaggtca
aggtcaagatcaccacatgaggctggtttttgtgtttacttgaaagggctgccatttgaa
gcagaaaacaaacatgtcattgatttttttaaaaagttggatattgtggaagatagtatt
tatattgcttatggacccaatgggaaagcaacgggtgaaggcttcgtagagttcagaaat
gaggctgactataaggctgctctgtgtcgtcataaacaatacatgggtaatcgctttatt
caagttcatccaattaccaagaaaggtatgctagaaaagatagatatgattcgaaaaaga
ctgcaaaacttcagctatgaccagagggaaatgatgttaaatccggagggggatgtcacc
tctgccaaagtctgtgcccatataacaaatattcccttcagcattaccaagatggatgtt
cttcagttcctagaaggaatcccagtggatgaaaatgctgtacatgttcttgttgataac
aatgggcaaggtctaggacaggcattggttcagtttaaaaatgaagatgatgcacgtaag
tctgaacgcttacaccgtaaaaaacttaatgggagagaagcttttgttcatgtagttact
ttagaagatatgagagagattgagaaaaatcctcctgcccaaggaaaaaaggggttaaag
atgtctgtgccaggtaatcctgcagttccaggaattcccaatgtgggaatacccaatgcg
ggattgcccagttcaggaatgcccagtgcgggactgcctaatgcgggaatgcccaatgca
ggaatgcctgctgcgggaatgcccaatgcaggaattcccagtgcgggaatgcctgctgcg
ggaatgcctggtgtgggaatgcccggtgcgggaatgcctagtgcaggaggtgaagagcat
gccttcttggctgtaggatctaaggaggccaacagtgggcctccatttaactttcctggt
aattttggtgggtcaaatgcctttggaccaccactccctcctccaggattaggaggggcc
tttggtgatgctaggcctggaatgccttcagttggaaatagtggtttgcctggtctagga
ctggatgttccaggttttggaggtggaccaaataatttaagtggaccaggatttggaggg
ggccctcagaattttggaaatggccctggtagcttaggtggcccccctggctttggaagc
gggccccctggccttggaaatgcccctgggcatttgagtgggcctccagcctttggccct
ggccctggccctggcccaatccacattggtggtcctcctggctttggatctagttctgga
aaaccaggaccaacaataattaaagtacagaacatgcccttcactgtgtctattgatgag
attttagatttcttttacggttatcaagtgatcccaggctcagtgtgtttaaagtacaat
gaaaaaggtatgcccaccggtgaagctatggtggctttcgaatctcgggatgaagccaca
gctgctgtcattgacttaaatgacagacctattggctctaggaaagtaaaacttgtatta
gggtag
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