Odocoileus virginianus (white-tailed deer): 110137585
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Entry
110137585 CDS
T10722
Symbol
RBM39
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
ovr Odocoileus virginianus (white-tailed deer)
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ovr03041
]
110137585 (RBM39)
Spliceosome [BR:
ovr03041
]
Common components
Common spliceosomal components
General mRNP proteins
110137585 (RBM39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
RRM_7
POP1_C
IHO1
Motif
Other DBs
NCBI-GeneID:
110137585
NCBI-ProteinID:
XP_020749714
UniProt:
A0A6J0XNU6
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Position
9:complement(60412974..60438695)
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AA seq
530 aa
AA seq
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MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRD
RERKKSKSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQP
LATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPS
IAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPSRR
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgatattgatattgaagcaatgcttgaggctccttacaagaaggatgagaac
aagttgagcagtgctaacggccatgaagaacgtagcaaaaagaggaaaaaaagcaagagc
agaagtcgtagtcatgaacgaaaaagaagcaaaagtaaggaacggaagcgaagtagagat
agagaaaggaaaaagagcaaaagccgtgaaaggaagcgaagtagaagcaaagaaaggaga
cggagccgttcaagaagtcgagatcgcagattcagaggccgctacagaagtccttactcc
ggaccaaaatttaacagtgccatccgaggaaagattgggttgcctcatagcatcaaatta
agcagacgacgttctcgaagcaaaagtccattcaggaaagacaagagccctgtgagggaa
cctattgataatctcactcctgaggaaagagatgcaaggactgttttctgcatgcagctg
gcagcaagaattcggccaagggatttggaagagtttttctctacagttgggaaggttcgt
gatgtgaggatgatttctgacagaaattcaagacgttccaaaggaattgcttatgtggag
tttgttgacgttagctcagtgcctctagcaataggattaactggtcagcgggttttagga
gtgccgatcatagtacaagcatcacaggcagagaaaaacagagctgcagcaatggcaaac
aatctacaaaagggaagtgctggacctatgaggctttatgtgggctcgttgcactttaac
ataactgaagatatgcttcgagggatttttgagccatttggaaggattgaaagtatccag
ctcatgatggatagtgaaacaggtcgatccaagggatatggatttattacgttttctgat
tcagaatgtgccaagaaagctttggaacaacttaatggatttgagctagcaggaaggccc
atgaaagttggtcatgtcactgaacgtactgatgcttccagtgctagctcatttttggac
agtgatgaactggaaaggactggaattgacttgggaacaactggtcgtctccagttaatg
gcaagacttgcagagggtacaggtttgcagatcccgccagcagcacagcaagctttgcaa
atgagtggctctttggcatttggtgctgtggcagaattctcttttgttatagatttgcaa
acaagactttcccaacagactgaagcttcagcgttagctgcagctgcctctgttcaacct
ctggcaacacagtgtttccaactctctaacatgtttaatcctcaaacagaagaagaagtt
ggatgggatacagagattaaagatgatgtgattgaagaatgtaacaaacatggaggagtt
attcatatttatgttgacaaaaattcagctcagggcaatgtgtatgtgaagtgcccatca
attgctgcagccattgctgctgtcaatgcgttgcatggcaggtggtttgcgggtaaaatg
ataacagcagcatatgtacctcttccaacttatcacaacctcttccctgattctatgaca
gcaacacaactactggttccaagtagacgatga
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