Odocoileus virginianus (white-tailed deer): 110137611
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Entry
110137611 CDS
T10722
Symbol
RORA
Name
(RefSeq) nuclear receptor ROR-alpha isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr04659
Th17 cell differentiation
ovr04710
Circadian rhythm
ovr05017
Spinocerebellar ataxia
ovr05321
Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
110137611 (RORA)
09159 Environmental adaptation
04710 Circadian rhythm
110137611 (RORA)
09160 Human Diseases
09163 Immune disease
05321 Inflammatory bowel disease
110137611 (RORA)
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
110137611 (RORA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ovr03000
]
110137611 (RORA)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ovr03310
]
110137611 (RORA)
Transcription factors [BR:
ovr03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
110137611 (RORA)
Nuclear receptors [BR:
ovr03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
110137611 (RORA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
110137611
NCBI-ProteinID:
XP_070325296
UniProt:
A0ABM4IBV6
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Position
6:37895387..38673582
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AA seq
523 aa
AA seq
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MESAPAAPDPAASEPGSSGSDAAAGSRETPLNQESARKSEPPAPVRRQSYSSTSRGISVT
KKTHTSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRT
SRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQQPGEAE
PLTPTYNISANGLTELHDDLSNYIDGHTPEGSKADSAVSSFYLDIQPSPDQSGLDINGIK
PEPICDYTPASGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHLETCQYLREELQQITW
QTFLQEEIENYQNKQREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGS
LEVVFIRMCRAFDSQNNTVYFDGKYASPDVFKSLGCEDFISFVFEFGKSLCSMHLTEDEI
ALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRAL
CGRHTEKLMAFKAIYPDIVRLHFPPLYKELFTSEFEPAMQIDG
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggagtcagctccggcagcccccgaccccgccgccagcgagccgggcagcagcggctcg
gacgcggccgccggctccagggagaccccgctgaaccaggaatccgcccgcaagagcgag
ccgcccgccccggtgcgcagacagagctattccagcaccagcagaggtatctcagtaaca
aagaagacacatacatctcaaattgaaattattccatgcaagatctgtggagacaaatca
tcaggaatccattacggtgtcattacatgtgaaggctgcaagggctttttcaggagaagt
cagcaaagcaatgccacctactcctgtcctcgtcaaaagaactgtttgattgatcgaacc
agtagaaaccgctgccagcactgtcgattacagaaatgccttgccgtggggatgtctcga
gatgctgtaaaatttggccgcatgtcgaaaaagcagagagacagcttgtacgcagaagta
cagaaacaccggatgcagcagcagcagcgagaccaccaacagcagcctggagaagccgag
ccgctgactcccacctataacatctcggccaacgggctcacggagcttcacgatgacctc
agcaactacatcgacgggcacacccccgagggcagcaaggcagactctgccgtcagcagc
ttctatctggacatacagccttccccagaccagtcaggtcttgatatcaatggaatcaaa
ccagaacccatatgtgactacacaccagcgtcaggcttcttcccctactgctctttcacc
aatggagagacttccccaactgtgtccatggcagaactagaacaccttgcacagaatata
tctaaatcacatctggaaacttgccaatacttgagagaagagctccagcagataacgtgg
cagacctttctgcaggaagagattgagaattatcaaaacaagcagcgggaggtgatgtgg
caattgtgtgccatcaaaattacagaagctatacaatacgtggtggagtttgccaaacgc
attgatggatttatggaactatgtcaaaacgatcaaattgtgcttctcaaagcaggttct
ctagaggtggtatttatcagaatgtgccgtgcctttgactctcagaacaataccgtgtac
ttcgatgggaaatatgctagccccgatgtcttcaaatccttaggttgtgaagactttatt
agctttgtatttgaatttggaaagagtttatgttctatgcacctgactgaagatgaaatt
gcattattttctgcatttgtcctgatgtcagcagatcgctcatggctgcaggaaaaggta
aaaatcgaaaagctgcaacagaaaattcagctagctcttcaacatgtcctacagaagaat
caccgagaagatggcatactaacaaagctgatatgcaaggtgtctacattaagagcctta
tgtggacggcatacagaaaagctaatggcgtttaaagcaatatacccagacattgtgcga
cttcattttcctccattatacaaggagttgttcacttcagaatttgagccagccatgcag
attgatgggtaa
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