Odocoileus virginianus (white-tailed deer): 110137950
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Entry
110137950 CDS
T10722
Symbol
NUP54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
ovr Odocoileus virginianus (white-tailed deer)
Pathway
ovr03013
Nucleocytoplasmic transport
ovr05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110137950 (NUP54)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
110137950 (NUP54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ovr03019
]
110137950 (NUP54)
Messenger RNA biogenesis [BR:
ovr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110137950 (NUP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
DUF892
Motif
Other DBs
NCBI-GeneID:
110137950
NCBI-ProteinID:
XP_020750315
UniProt:
A0A6J0XLD5
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All DBs
Position
29:24890398..24920552
Genome browser
AA seq
507 aa
AA seq
DB search
MAFNFGTPSGTSGTAAATAAPAGGFGGFGTTSTTAGSAFSFSTPANTGTTGFFGSTQNKG
FGFGTGFGTTTGTSTGLGTGLGTGLGFGGFNTQQQQQTTLGGLFSQPAQAPAQSNQLINT
ASALSAPTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIPPVEFTLENPFCRFKAVGYSC
MPNNKDEDGLVVLVFNKKETDIRSQQQQLVESLHKVLGGNQTLTVNVEGIKTLPDDQTEV
VIYVVERSPNGTSRRVPATTLYAHFEQTNIKTQLQQLGVTLSMTRTELSPAQIKQLLQNP
PAGVDPIIWEQAKVDNPDSEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDIGE
LQKNQTTTMAKIAQYKRKLMDLSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQGE
LNAPTQFKGRLNELMSQIRMQNHFGAVKSEERYYIDADLLREIKQHLKQQQEGLSHLISI
IKDDLEDIKLVEHGLNETIHIRGGVFS
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggccttcaactttggcactccgtctggcacttcaggtaccgctgcagccaccgcggct
cccgcgggtgggtttggaggatttgggacaacgtctaccacagcgggttctgcattcagc
ttttctactccagctaacacaggcactactggattctttggtagtactcagaacaaaggt
tttggatttgggactggttttggcacgacaactggaactagtactggcttaggtactggt
ctggggaccggacttggatttggaggatttaatacgcagcagcagcaacagactacatta
ggtggtctcttcagtcagcctgcacaagctcctgcccagtccaaccagctaataaatact
gccagtgccctttctgctccaacactactgggagatgagagagatgctattttggcaaaa
tggaatcaactacaagccttttggggaacaggaaaaggatatttcaacaataacattcca
cccgtggaattcacactagaaaatcccttttgccggtttaaggctgtaggttatagttgc
atgcccaataataaagatgaagatgggctagtggttttagttttcaacaaaaaagaaaca
gatattcgaagccagcagcagcaattggtagaatcattgcataaagttttgggaggaaac
cagacccttactgtaaatgtagagggtattaaaacattgccagatgatcagacagaagtt
gtcatttatgttgttgagcgttctccaaatggtacttcaagaagagttccagctacaaca
ctatatgcccattttgaacaaaccaatattaaaacacaattgcagcaacttggtgtaacc
ctttctatgactagaacagagctttctcctgcacagatcaaacagcttttacagaatcct
cctgctggtgttgatcctattatctgggaacaagccaaggtggataaccctgattccgaa
aagttaattcctgtaccaatggtgggtttcaaagaacttcttcgaagactgaaggttcaa
gatcagatgactaagcagcatcagaccagattagatataatatctgaagatattggtgaa
ttacagaagaatcaaactacaaccatggccaaaattgcacaatacaagaggaaacttatg
gacctttcccacagaactttacaggtcctaatcaaacaggaaattcagaggaagagtggg
tatgccatccaagctgatgaagagcagttgcgagttcagctagatacaattcagggtgaa
ctaaatgcccctactcagtttaagggccgactaaatgaactgatgtcccaaatcaggatg
cagaatcactttggagcagtcaaatctgaagaaagatattacatagatgcggatctgtta
cgagaaatcaagcagcatttgaaacaacaacaggaaggccttagccacttgattagcatc
ataaaagatgacttagaagatatcaagttggtagaacacggattgaatgaaaccatccat
atcagaggtggtgtcttcagttga
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