Odocoileus virginianus (white-tailed deer): 110138010
Help
Entry
110138010 CDS
T10722
Symbol
CLASP1
Name
(RefSeq) CLIP-associating protein 1 isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
ovr Odocoileus virginianus (white-tailed deer)
Brite
KEGG Orthology (KO) [BR:
ovr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ovr03036
]
110138010 (CLASP1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ovr04812
]
110138010 (CLASP1)
Chromosome and associated proteins [BR:
ovr03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
110138010 (CLASP1)
Cytoskeleton proteins [BR:
ovr04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
110138010 (CLASP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT_EF3_N
HEAT
HEAT_EZ
TOR1L1_N
Sec7-like_HUS
Cnd1
HEAT_2
RTP1_C1
Adaptin_N
HEAT_DAAF5
MMS19_N
ParcG
MMS19_C
TAN
KH_DEAH11_1st
Motif
Other DBs
NCBI-GeneID:
110138010
NCBI-ProteinID:
XP_070332432
LinkDB
All DBs
Position
13:complement(62230933..62499424)
Genome browser
AA seq
1589 aa
AA seq
DB search
MEPRMEACLAQVLQKDVGKRLQVGQELIDYFSDKQKSADLEHDQTMLDKLVDGLATSWVN
SSNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLIDRLGDAKDSVREQDQALLLKIMD
QAANPQYVWDRMLGGFKHKNFRTREGTCLCLMATLNSSGAHTLTLSKIVPHICNLLGDPN
SQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGNMIQSANDKN
FDDEDSVDGNRPSSASSTSSKAPASSRRNVGMGTARRLGSSSLGSKSSAAKEGAGAVDEE
DFIKAFDDVPVVQIYSSRDLEESINKIREILSDDKHDWEQRVNALKKIRSLLLAGAAEYD
NFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIPN
SAKIMATSGVVAVRLIIRHTHIPRLIPVITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSL
ERHISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHTLESSYQKALQTHL
KSSDSVVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSASTAGSLQRSRS
DIDVNAAASAKSKISSAAGAAPFSSAAALPPGSYASLDGTATKAEGRIRTRRQSSGSATN
VASTPDSRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGYSGLAGGSSRGPPVTP
SSEKRSKIPRSQGCSRETSPSRMGLARSSRIPRPSTSQGCSRDASRESSRDTSPARGFTP
LERGPGSVGSAVIAHGPLWRVKSSWTGDQACVTCIGDRFGLGQAGRIPGSVNAMRVLSTS
TDLEAAVADALLLGDSRSKKKPVRRRYEPYGMYSDDDANSDASSVCSERSYGSRNGGVPH
YLRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLKSQRTLSRVELKRLCEIFTRMFADPH
SKVFSMFLETLVDFIIIHKDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRDSF
PFDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLARQMDPTDFVNSSETRLAVSRIITW
TTEPKSSDVRKAAQIVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNHLKNSSNTNVG
SPSNTIGRTPSRHPSSRTSPLTSPTNCSHGGLSPSRLWGCSADGLSRHPPPFPQPNSIPT
APSHKTLRRSYSPSMLDYDTENLNSEEIYSSLRGVTEAIEKFSFRSQEDLNEPIKRDGRK
DCDIVSRDGGIASPAPEGRGGSEVVEGGRTALDNKTSLLNTQPPRAFPGPRARDYSPYPY
SDTISAYDKTALKEAVFDDDMEQLRDVPVDHSDLVADLLKELSNHNERVEERKGALLELL
KITREDSLGVWEEHFKTILLLLLETLGDKDHSIRALALRVLREILRNQPARFKNYAELTI
MKTLEAHKDSHKEVVRAAEEAASTLASSIHPEQCIKVLCPIVQTADYPINLAAIKMQTKV
VERIAKESLLQLLADIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEELKPHLAQLTGS
KMKLLNLYIKRAQTTNSNSSSSSDVSTHS
NT seq
4770 nt
NT seq
+upstream
nt +downstream
nt
atggagcctcgcatggaggcctgcctggcacaggtgctgcagaaggatgtggggaaacgg
ctgcaggttggccaagaactgatagactatttctcagacaaacagaagtctgccgacctc
gagcatgaccagaccatgttagacaaacttgtggatggactcgctacctcttgggtgaac
tctagcaattataaggtggttctcctgggcatggacatcctgtccgcgttggtcacccgg
ttgcaggatcggttcaaggcgcagatcggtacagtgctgccgagtttaatagacagactg
ggagatgctaaagactctgtgagggagcaggaccaggccctgctgctgaagatcatggat
caggctgctaatccccagtacgtgtgggaccggatgctgggcggcttcaagcacaagaac
ttccgcacccgggaaggcacgtgtctctgcctcatggccaccctcaacagctctggagct
catacattaacactaagcaagatcgtgccacatatatgtaacctgctcggagatcccaac
agccaggttcgagatgcagcaataaacagcttagtggaaatttacagacatgtaggagaa
cgtgtgagggcagatctcagtaaaaaaggattgccacagtcccggttgaatgtaattttt
acaaaatttgatgaagtccaaaaatctggaaacatgatacaatctgcgaatgataaaaat
tttgatgatgaagattctgtggatggcaatagaccgtcttccgccagctccacgtcgtcc
aaagctccagcaagctcgcggagaaacgttggaatggggaccgcccggaggctcggctcc
tcgtctctcggatccaagtcttcagctgcaaaagaaggagctggtgctgttgatgaagag
gattttattaaagcatttgatgatgtgcctgtagtccagatttattccagccgagacctt
gaggagtccataaacaagattagggaaatactgtctgatgacaagcatgactgggagcaa
agagtaaatgccctaaaaaagattagatctttactcttggctggtgctgccgagtatgat
aacttcttccagcacttacggcttttggacggagcctttaaactgtcggctaaggatcta
cggtctcaggtcgtgcgggaggcttgtatcacgctggggcacctgtcgtcagtactgggg
aataagtttgaccatggcgctgaagccatcatgccaacgatctttaatttaatcccaaat
agtgccaaaatcatggccacctcgggggttgtagctgtcaggttaatcattcggcacacg
cacatcccaaggctaatccccgtcataacaagcaactgcacctccaagtctgttgcagtt
agaaggcgctgctttgaatttttagatctacttttacaagagtggcagacacattcactg
gagcgacacatatcagtattagctgaaacgataaagaagggaatacatgatgctgattca
gaagcaaggatagaagccagaaagtgttactggggtttccacagtcacttcagcagggag
gcagagcacctgtaccacacgctggagtcctcctaccagaaggccctgcagacccacctc
aagagctcggacagcgtggtgtcgctgccgcagtcggaccgctcatcctccagctcccag
gagagcctcaatcggccgctctctgccaaaagaagtcctactggcagtaccacctccaga
gcttccacggtcagcaccaagtccgcatccaccgcagggtccctgcagcggtctcgaagc
gacatcgacgtgaacgcagccgccagcgccaaatccaagatctcctcggctgccggcgca
gcgcccttcagctcggccgcggccttacctccgggctcgtatgcgtccttagatggtact
gccactaaagcggagggccggatccgcacgcgacggcagagctccgggagcgccaccaac
gtcgcctctacacctgacagtcggggccgcagtcgcgccaaagtggtctcgcagtcccag
cgatccagatctgctaatcctgctggtgctggcagccggtccagttccccagggaaattg
ttgggaagtggttatagtggccttgctgggggttcctcaagaggcccacctgtgacacct
tcttcagaaaagcgaagcaagatccccaggagtcaggggtgtagtcgagaaacaagtcca
agccgcatgggattagcacggagcagccgtatccctcgacccagcacgagtcaggggtgc
agccgcgatgccagccgtgagagcagccgggatacgagccctgctcggggcttcacgccg
ctcgagcgtgggcccgggagtgtaggctcagcggttattgcgcacgggcccctgtggcgt
gtgaaatcttcctggaccggggatcaagcctgtgtcacctgcattggagaccgctttggg
ctcggccaggcaggaaggattcctggttctgtgaacgccatgcgggttctgagcaccagc
acagatctggaagctgctgtcgctgacgctttgctgttaggagactccaggagcaagaag
aagcccgtgaggaggcgctacgaaccctacggcatgtactctgacgacgacgccaacagc
gacgcctccagcgtctgctccgagcgctcctacggctcccgcaacgggggcgtcccccac
tacctgcgccagaccgaggacgtggccgaggtgctcaaccactgcgccagctccaactgg
tccgagaggaaggaagggcttctgggtctgcagaacctgctcaagagccagaggacgctg
agtcgagtagaattgaaacgattgtgtgagattttcacccgaatgtttgctgaccctcac
agcaaggttttcagtatgtttttggagactcttgtggatttcataataattcataaggat
gacttgcaagactggctttttgttcttctcacacaattgctgaagaaaatgggagcggat
ttacttggatctgtgcaagcaaaagttcagaaggctcttgatgtcacaagggactccttt
ccatttgatcaacaatttaacattttgatgcgatttattgtggatcagactcaaactcct
aacctcaaggtcaaagttgcaatcctgaagtacattgagtctctcgccaggcagatggac
ccaacagatttcgtaaactctagtgagacaaggcttgctgtttctagaattataacctgg
acaacagaaccaaagagttcagacgtgagaaaggcagcacaaattgtgctcatctctctg
tttgaattgaacactcctgaatttaccatgttacttggtgccttgccaaaaacattccag
gatggtgccaccaaactcctgcacaaccacctcaagaattccagtaacaccaatgtgggc
tctccaagcaacaccattggtcggactccctcccgacaccccagcagccggaccagcccc
ctgacctcacccaccaactgctcccatggtggcctgtctccaagtcggttgtggggttgc
agtgccgatgggctgtcgaggcacccacctccctttcctcagcctaactccatccccacc
gctccctcccacaagactctcaggcgctcttactctcccagcatgctggactacgataca
gaaaacctgaactctgaagaaatctatagctctttgcgtggagtgaccgaagccattgag
aagtttagttttcgaagccaagaggatctgaatgagcccattaaaagagatggcagaaag
gactgcgatattgtgtcccgtgatggtggcatcgcctcccctgcccccgagggccggggc
ggcagcgaggtggtggaaggaggccggacggctctggacaacaagacctccctcctcaac
acgcagccccctcgcgccttcccggggccgcgggcgcgggactacagcccctacccctac
tcggacaccatcagcgcctatgacaagaccgccctgaaggaggccgtgttcgacgatgac
atggagcagctgcgagacgtgcccgttgaccactcggacctggtggcagacctcctgaag
gagctgtccaaccacaacgagcgcgtggaggagcggaagggcgcgctgctggagctgctc
aagatcacgcgcgaggacagcctgggcgtctgggaggagcacttcaagaccatcctgctg
ctgctgctcgagaccctcggggacaaggatcattccatccgagcactggctctcagagtg
ttgcgggaaatcctgagaaaccagccagcgaggtttaaaaactacgcggagctgacgatc
atgaagaccctggaggcccacaaagactcccacaaggaggtggtgagggctgccgaggag
gctgcatccacgctggccagttccatccacccagagcagtgcatcaaagtgctgtgcccc
atcgtccagacagccgactaccccatcaacctggccgccatcaagatgcagaccaaagtc
gtcgagaggatcgccaaggagtccttgctgcagctcctcgcagacatcatcccaggcctg
ctgcagggttacgacaacaccgaaagcagcgtgcgcaaggccagtgtgttttgcttagta
gcaatttattccgtaatcggagaagagctgaaacctcacctggcacagcttacggggagc
aagatgaagctgctcaacttatacataaagagggcgcagaccacgaacagcaacagcagc
tcctcctctgacgtctcgacccacagctaa
DBGET
integrated database retrieval system
